Basic Information

Insect: Bactrocera tryoni
Gene Symbol: L
Assembly: GCA_016617805.2
Location: NC:59036688-59141653[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.9e-05 0.0011 18.9 1.7 1 23 308 330 308 330 0.98

2 18 0.43 26 5.2 5.7 1 23 336 358 336 358 0.98

3 18 2.4e-07 1.4e-05 24.9 3.1 1 23 364 386 364 386 0.99

4 18 2e-05 0.0012 18.9 0.2 1 23 392 414 392 414 0.98

5 18 2.1 1.3e+02 3.0 0.7 2 23 478 501 477 501 0.82

6 18 0.00094 0.056 13.6 0.1 2 23 530 552 529 552 0.96

7 18 0.027 1.6 9.0 0.8 1 23 643 665 643 665 0.97

8 18 5.9 3.5e+02 1.6 1.6 2 23 673 694 672 694 0.85

9 18 0.054 3.2 8.0 0.4 1 23 702 727 702 727 0.89

10 18 1.4 83 3.6 0.1 1 19 732 750 732 752 0.90

11 18 1.1 64 3.9 1.6 1 23 762 784 762 785 0.95

12 18 0.0035 0.21 11.8 2.5 1 23 822 844 822 845 0.96

13 18 1.7 99 3.4 0.2 1 23 1016 1040 1016 1040 0.88

14 18 0.0018 0.11 12.7 4.7 2 23 1049 1071 1048 1071 0.97

15 18 0.12 7.1 6.9 0.1 1 23 1077 1099 1077 1099 0.92

16 18 0.071 4.2 7.7 0.3 2 23 1107 1128 1106 1128 0.96

17 18 0.0037 0.22 11.7 0.3 1 23 1257 1279 1257 1279 0.96

18 18 0.0082 0.49 10.6 2.8 1 23 1286 1308 1286 1308 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.9e-05	0.0011	18.9	1.7	1	23	308	330	308	330	0.98
2	18	0.43	26	5.2	5.7	1	23	336	358	336	358	0.98
3	18	2.4e-07	1.4e-05	24.9	3.1	1	23	364	386	364	386	0.99
4	18	2e-05	0.0012	18.9	0.2	1	23	392	414	392	414	0.98
5	18	2.1	1.3e+02	3.0	0.7	2	23	478	501	477	501	0.82
6	18	0.00094	0.056	13.6	0.1	2	23	530	552	529	552	0.96
7	18	0.027	1.6	9.0	0.8	1	23	643	665	643	665	0.97
8	18	5.9	3.5e+02	1.6	1.6	2	23	673	694	672	694	0.85
9	18	0.054	3.2	8.0	0.4	1	23	702	727	702	727	0.89
10	18	1.4	83	3.6	0.1	1	19	732	750	732	752	0.90
11	18	1.1	64	3.9	1.6	1	23	762	784	762	785	0.95
12	18	0.0035	0.21	11.8	2.5	1	23	822	844	822	845	0.96
13	18	1.7	99	3.4	0.2	1	23	1016	1040	1016	1040	0.88
14	18	0.0018	0.11	12.7	4.7	2	23	1049	1071	1048	1071	0.97
15	18	0.12	7.1	6.9	0.1	1	23	1077	1099	1077	1099	0.92
16	18	0.071	4.2	7.7	0.3	2	23	1107	1128	1106	1128	0.96
17	18	0.0037	0.22	11.7	0.3	1	23	1257	1279	1257	1279	0.96
18	18	0.0082	0.49	10.6	2.8	1	23	1286	1308	1286	1308	0.97

Sequence Information

Coding Sequence: ATGTCGCGTCGTAAACAGGCAAAACCGCGTGCATTTCTTAAACttgGCGAAGATCCGGATAAATGTTCTAATCTTGAGCTTTTGGAACCAAATGCTAAAAAACATGAAGGTAACAGAACAGCTAATTtggaaaaacaaatgaaatctGAATTCACCGAAACACCTAAACAGCAATGTGATCAAAAATTAAACTCAGCATCAgcaattaaactaaaaataaaagtatctCATGAGACTTCAGCAGTATACGCTAAATACGAACaatcAACATCGAATAATATTgtaaagaatacaaaaaatacaaaacttgataATCCGACCATAAAAATGGATAACGACTGCGTTAGTAATATTTCCACGGAAGGAATACTGGAGTCAGACAACGAAGATATAGTATATTTGAATGACGAAGAATACACTGAGGATGATTTACACAGTTTGGATAGTTTCTATTCTGatATATACTCAACGCAAACATCCTCAAACTATTCACCGTCTGTGTCGGATGGCACCTTAACACCAAATTCATTACAAAATCTTGAACACATAACGCCACATCTTGCACATCTACAAACCATGCAATACTTTCCGCAGCAGCGTTCAGACGGAGGTGTTAAACAAAACGAAAGTCAAAGTAAACGAGTTAATATTGACGGAAACGAAATGGGAGGTAATGAAGATGCCAAACCAGCagaaaaaagttctgcggaGACACTTAACACGGCTAAACTTGAAGAAGGCAATGTTAACTCGAATATTCAACACAAACGACAAGTGCGCCTTCATCGCCAGCACCTTTACCACCATGGAGAGTATCACACTGCGAAGCTTGTTACAAAACTGAGAAAAATCGAAAGAGTCGCGACAAAGTTTGATAAGTTGACAGGAGATGGCATTAAGGGAAGCAACGTTGATGGGTCTTATCAATGTCAGTTCTGTGAAAAATCATTTCCGCGGCttggttatttaaaaaaacacgaACAGaGTCATGCCGAACATCTACCTTTCAAATGTGAATATTGCGCTAGACTTTTCAAACATAAAAGGTCTAGAGATCGCCACACAAAGCTACATACTGGGGATCGACGATATCGTTGTCCACACTGCGAGGCAGCTTTCTCTCGAAGtgATCATCTAAAAATTCATATGAAAACCCACGATAATCAGAAACCGTTCCAATGCACGGTATGCAATCGTGGCTATAATACAGCTGCAGCATTAACTTCGCATATGCAAAACCACAAGAAACAAGCAACCATTTTATCGGCAGGGGGAAACCCTCAAGCTCTTAATTACAGTCCTCGATCAAGTGAATCGGTATCAAGTGGTGGAAGTTTACAAAAAAGGAGCTATGGCGCATCATTGATTACCGGTGATAGTAAAACAAATCGAGTGGACCATCCGAAACGACCCAGCACAGTCAATCTGCTGACGTGTAATTATTGCTCCAAGTCCAAGTTTATTTCTATTGAGCAGTTCAATGAACATATTAGCTCGAATCATAGCAATGAATTATTTTCCGTAAAGAAACCGGCTCCACAGCTTGCTATAAGTAACGCTATTTCGGATATAAACCCGTTCCAGCTGAGTTGTGAATATTGCACTAGAGAGTTTGGAAACCTTCCAGCTTTATTTCAACATATACGGATCGCACATGTCGATCGATTGACCAGTCCCAATTCATATTTTGAACATTTCAATCGTTTGGCTGCATGTGGTACTTTTAGTCCTCGTTTGGTAAGTGACAAAACAGTTGAAAGGGAACTCATCATGGTAAATGAGAGTAATATAAAGCTAGAGCCACTTTTACCTTCAGCAAACGTCCATGCTGAAAAACAAGAGGATGAGCCCACTGATCTTAGTCAAAATAATCGACGTTCATCAACTGCGCTCCCAATGCCAGAAGAGTCTCTCCAGCCAGATATGTTTTTTTGCAATCAATGTAATGCTGGATTACCAGATTTTGATACGTTTCGAAACCACTTAAAAACACATATAACGCAAGACTTAAACCTTATATGTCATCATTGTGGTTTGGCTCTACAAGAACAATCAGAACACGAACAGCATGTGATTTCACATTATTTAATAACAAGCTCTGAATATATTTGTGCAGGCAACAAGTGTGACAAATCTCATTCAAAACCGGAGGAACTTCAAGCTCACATGTTTGAGCAGCACGCAATCCCTATGTTCAAGTGTTCTGTGTGCTCCGAACTATTTGAGTCAAAAATGGCAATTCAGATGCATTTTGCTTGTACACATTCCATTGAAACTAAAATATTCCGTTGCTCAGCCTGTATGGAAATATTTCGATCTGAAATAGAGTTTAGTACGCACGTCAAATCACATCATCCTGGTCTTAATAGACCGATACCCAATTCCCTTCAATGCATGTTTTGCCGCACTATCTGTTCAAATGAATTAGAGATGCATTTTCATTTAGCTGCACATGCTCGCCAATTCCAGTGCCCTTCATGCCCGGAAACATTTCATGTAGAATTTCTTTTAGATCGACATATGCAAAATCATCACACAGACAATAATCGAGAAACATTGTCTTCGAACGGAACATACGAAGAAGTATCAACATCATCAAATATGCCGAGTCAAATGAACTCTCTTTATATGAATTCCTTAATAAACAAAGCCCCACAAATGCCTATTTCTTCGCAAAATAACAATACTAGCGTTCTTGACTACAATATTGCTTTTGCGGCACATCTTAATAAAAGCATTTTTCCTGGTTCCCATGAGGCTGCGACTACATTGACCAATGGCAAGTTTTACAATGCTTTGCAAGTGGATACAGATACCGTGAAACATCCCGATCTCATATACGGCCTTAGTCGACGGTATTTTGACACAAGCCGGACATTGATAGAGATGTATGCACAGCATAAAAtagagaaaccaaaaaatgtggaaaactATTACAACAGACCGAAACAACATCATTTAAAATCTCAAACAGATTCAAACCGAATACGATCACCCGTAGAGTCAATAATTCCAACTTCCATTTCTTCGAACTCTTCAAAGGGTTATAGCTGTGATATTTGCGAACGTAATGATTTCCGATCAGAAGGAGAAGTTAATTCACATCGTAAAATCGTTCATAACATAAAAACGGGTGTTAGTCTACGCTGCGCTTATTGCTCAGGAAATTTTAAGTCACGCACTGAGTTGGAACATCACATGAGAACTTGTCATAATTCTACCGGTAAACACAAATGTCTCATTTGTGATGAAATTTTCCCCTCGCCAGCTATATTGGCAGAACACAAATTGCAACATTCCAAGGTTGGTCAATCCGGAAAATGTTCTCACTGCAGCAAACCATTGGACGATGTTGCAGCGTTTAAAGCACATCTCAGTGAGCACAACATTGAGAGTCAGCTTCCCATGCAATGTATCTGCTGCCGACAATCGCTTCACTCCGATTTTGAAATCAGTTTGCATGCTCAgttCCATACTAAATCTTCCAACGTTCCAGAAAGTGTATGTGCCCTTTGCTTAGAGTCTATTCCGAACCCGATTAACGGAGAAGCAAAAGTTTGTGACAAATGCTGCCGGAAACACAAACTTGGCGCACATTTTAAAGGCCAAAGGTTACTTAATGTCCCTTATGAACCAAGTTCCGAAGCTTGCCGAAGCACATTGAAGGTTGAAAGTCGTTGTAATATCTGCAAATTGATTCTACCATGCACCCAAAAACTCCAAGAACATTTAGTCGAACACACATTTGCTGGTTGTGAAGAGCGAGGCTTTAATTGCTATATATGCTCTGCTGTGTTTACTGCTCCAAGTGGTTTGCTATCCCACATGCATGAGCATGGATTGCAGAGCAGGCCCTACGACTGTAATCTATGTagcgaaaagttttttttccgAACGGAACTTGAGCATCATTTACTGAGCCATGAGAAGCGGGACCTGCTTGAgtctaaaaataaagaaaaatgtgagaacaaattttcgtttcttAAAGAAGTCGATAACTCTGCGTCCCATCTGACTGAAGTTAAAAGGGAAATACTTCCGGTTGATGATAAAATCATAGCAGGCGAAGAGGATGAGTATATCGAAATAGAAAAAGTTACTGATGTCCATCAGACATATAATAATGCAAAGCAAACTTTTGTCACACGTAAAGAAGGCTTACCAATGGAAGAATTAAACCAAAACTGTGCCGAAGAAAAccgtatttaa
Protein Sequence: MSRRKQAKPRAFLKLGEDPDKCSNLELLEPNAKKHEGNRTANLEKQMKSEFTETPKQQCDQKLNSASAIKLKIKVSHETSAVYAKYEQSTSNNIVKNTKNTKLDNPTIKMDNDCVSNISTEGILESDNEDIVYLNDEEYTEDDLHSLDSFYSDIYSTQTSSNYSPSVSDGTLTPNSLQNLEHITPHLAHLQTMQYFPQQRSDGGVKQNESQSKRVNIDGNEMGGNEDAKPAEKSSAETLNTAKLEEGNVNSNIQHKRQVRLHRQHLYHHGEYHTAKLVTKLRKIERVATKFDKLTGDGIKGSNVDGSYQCQFCEKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKQATILSAGGNPQALNYSPRSSESVSSGGSLQKRSYGASLITGDSKTNRVDHPKRPSTVNLLTCNYCSKSKFISIEQFNEHISSNHSNELFSVKKPAPQLAISNAISDINPFQLSCEYCTREFGNLPALFQHIRIAHVDRLTSPNSYFEHFNRLAACGTFSPRLVSDKTVERELIMVNESNIKLEPLLPSANVHAEKQEDEPTDLSQNNRRSSTALPMPEESLQPDMFFCNQCNAGLPDFDTFRNHLKTHITQDLNLICHHCGLALQEQSEHEQHVISHYLITSSEYICAGNKCDKSHSKPEELQAHMFEQHAIPMFKCSVCSELFESKMAIQMHFACTHSIETKIFRCSACMEIFRSEIEFSTHVKSHHPGLNRPIPNSLQCMFCRTICSNELEMHFHLAAHARQFQCPSCPETFHVEFLLDRHMQNHHTDNNRETLSSNGTYEEVSTSSNMPSQMNSLYMNSLINKAPQMPISSQNNNTSVLDYNIAFAAHLNKSIFPGSHEAATTLTNGKFYNALQVDTDTVKHPDLIYGLSRRYFDTSRTLIEMYAQHKIEKPKNVENYYNRPKQHHLKSQTDSNRIRSPVESIIPTSISSNSSKGYSCDICERNDFRSEGEVNSHRKIVHNIKTGVSLRCAYCSGNFKSRTELEHHMRTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSKPLDDVAAFKAHLSEHNIESQLPMQCICCRQSLHSDFEISLHAQFHTKSSNVPESVCALCLESIPNPINGEAKVCDKCCRKHKLGAHFKGQRLLNVPYEPSSEACRSTLKVESRCNICKLILPCTQKLQEHLVEHTFAGCEERGFNCYICSAVFTAPSGLLSHMHEHGLQSRPYDCNLCSEKFFFRTELEHHLLSHEKRDLLESKNKEKCENKFSFLKEVDNSASHLTEVKREILPVDDKIIAGEEDEYIEIEKVTDVHQTYNNAKQTFVTRKEGLPMEELNQNCAEENRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01563182;
90% Identity: iTF_00191607;
80% Identity: -