Basic Information

Insect: Bactrocera tryoni
Gene Symbol: salm
Assembly: GCA_016617805.2
Location: NC:17019491-17077920[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5e-06 0.0003 20.7 1.9 1 23 417 439 417 439 0.98

2 8 3.6e-05 0.0022 18.0 3.5 1 23 445 467 445 467 0.98

3 8 7.3 4.3e+02 1.3 4.7 5 23 739 757 736 757 0.88

4 8 3.7e-08 2.2e-06 27.4 0.2 1 23 763 785 763 785 0.98

5 8 0.00063 0.037 14.1 0.9 1 23 795 817 795 817 0.98

6 8 0.0018 0.11 12.6 1.7 3 23 1039 1060 1037 1060 0.93

7 8 1.2e-05 0.00073 19.5 5.0 1 23 1386 1408 1386 1408 0.96

8 8 9.7e-08 5.8e-06 26.1 0.7 1 23 1414 1436 1414 1436 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5e-06	0.0003	20.7	1.9	1	23	417	439	417	439	0.98
2	8	3.6e-05	0.0022	18.0	3.5	1	23	445	467	445	467	0.98
3	8	7.3	4.3e+02	1.3	4.7	5	23	739	757	736	757	0.88
4	8	3.7e-08	2.2e-06	27.4	0.2	1	23	763	785	763	785	0.98
5	8	0.00063	0.037	14.1	0.9	1	23	795	817	795	817	0.98
6	8	0.0018	0.11	12.6	1.7	3	23	1039	1060	1037	1060	0.93
7	8	1.2e-05	0.00073	19.5	5.0	1	23	1386	1408	1386	1408	0.96
8	8	9.7e-08	5.8e-06	26.1	0.7	1	23	1414	1436	1414	1436	0.98

Sequence Information

Coding Sequence: ATGTGTTCCATTTTTCATAATCGCATCAACTATCGCGGTTTGCGCAGCAATTCGAGTGGCAGCAATAGTAGCGGCAGCATAAGTAATCTGAGCAAAGAACTGGATGCCGATCGCAATAATAATGGCGGTAGCGGTGGCGCTGGGGGCGCTGTTGTGGGCAGCGGCGAACACAATGAGCACATCGGCGACGAAACGACTTGTGGGGATGAACACAAAGCAGGCAACCAGTTGCCTTTGAAGAGCGCCAATTCCACGCCCGACAGCGCGGTCGTCGACGAGAACGCCGATCCCCTTTGCAATATGCGTGCGGCCAGCGTGGAACTGGCGGAGCAACGTAGCAGTGCGGAGCGCGATGAAGGCGAGGACGAGTCGGAGGAGTTGGCGGGCGACAGCAATGAGGCGTTGGATTTGTCCGTGCTGCCGAGCAATCGACTGCCCGGTAGCGGTCATGTGGCATTGGAGGCTTTACAACACACCAAAGTGGCGGTGGCGCAATTTGCCGCCTCAGCGCTGAGCGGCGCACAAAATTACGGCGAAGCTATGAACGAGCTGGCGATGGTGCAATCGACGATACTGAATGTGCAGCGGCAACATCTGATGCAACTGCAGCTAATACAACATCTGCAGAGTCAACTGAAGCGCGCTGGCGATCTGACAATGGATGCCGAGCAGCTGGAAGAGCAACAGCATGCGGATGATTCTGAGCACTCGGCGCCAAAGCGAAGATACTTGCAAACGCCTCCGGCGGAAGCGGAAGAGAAGCTGGCGGAAGCTGTAACTACAAGTGTGGCTTTGAATGCAGCGAGTGCACATAACAACTTAAAAGCCAATGAGCCGTTCAATGCTTCGCGGCCGCCATCTACGTCAAATGAAGAGAATACAAAGACTGAAGAGAGAACAAATAAGAAGGCGAGGGAGCCGGCGTCAAAGCATGCCAAAAATGAGGAAGCTAGTAATACAGGCAGTACTAGTCTGGCTGCTGTGGGTCCAACGCTACCAGCTCATAGCACCGCAAATAACAGCAATTATCAACCCTTGATGTGTGATATTAGCTCCTCGCTCGCCTCTAGCATTATCACGAATCATGATCCATCGCCTGCACCTAACGAGATGAACTGCTTGGAGATGTTGCAACGCCGCACCGAGGAGGTGCTCGATTCTGCCTCACAAAGCTTGCATGCCTCACACCTGCAAGACGACTATGAGTACGCGCAGAAGGATGCGCAGGGTCGTGGTGAGATATTTAAACACCGCTGCAAGTATTGCGGCAAGATCTTTGGCTCCTTTTCGGCATTGCAGATACACTTGCGCTCACACACCGGGGAGCGACCATTTCACTGCAACGTCTGCGGCAGTAAATTTACAACCAAGGGCAATCTGAAAGTCCACTATCAACGGCATACACAGATATTTCCACCCATGTTGCTGGCGCCTGGACCGGGTAGTGCTGTTGTGGAACAGTTTCCAACTTATGGCGCACCAGCTGGCGGACCGCTAATGTCAGGTGTGACACCAGTAAGATTAGCCGCGCCAGCAGAGGATAGTAAGCAGCTGAGTTGTGAGGATCCGCCACAAATTGCACACAAAGAAAAGCATGAGGAACACGCAAAGATCGCCATAAGCAATCGTGTCACAAAACCGGAAGCGCCAATTTCACCTATTGACACCCCGCAAGACCTAAGCAAGCCGCATCATTCGCCTGTATTGCACGAAAACCCGTCTCCGCTAGAGCCGCCAAGTCCACCACCAAAGACCTCACCGGTATTAAAACCAAGTACAGAGACAAAGCATGAAAAACCGGAGCGTACGAGCAGTCAAAACCCGCCACAACCCAATCAGCATACGTCGAAGCGCAGTAGCAATGCGCGGAAACGTAACTCACACGCTAATACGTCACATGCCGGCGCCAGCGAAACACGTAAGCCACATGCACACGACAAGTGCGAACGCGAGCGCGAACGCATGCAGGAAGGTGGCGAGTTTCTGCATAAATCCGCATCGGCCTTACGACGCTCCTCGCTGAGTCGCAACTCCAGCAATAGTGGGCTCGAGCCGCCGCATATCTCATCTGAATACTCGCTGGCGCAAATGGAACGCATTATCGACAAATCGTGGGAAGATCTCATCGAGATCGACACCACGTCGGAGACTTCGAAGCTGCAACAGCTGGTGGATAATATCGAgaacaaactgaccgatccgaATCAATGCATCTTCTGTCACAAAGTGATGTCCTGCCGCAGTTCATTGCAAatgcacatacgcacacataccgGCGAGCGACCGTTTCGTTGTAAAATTTGCGGACGTGCCTTCGCCACCAAGGGTAATCTGAAGGCGCACATGAGTATACACAAAATCAAACCGCCGATGCGTAGCCAATTCAAATGTCCCGTCTGTCATCAGAAGTTCTCGAATGGCGTCATACTGCAACAACACATACGCATACACACGATCGATGACGGCAGCGGCGCTTTGGTTGGCCTACCGGGGGTCAACATAAATGGCGGCATGTTGGGCGCATTTTCACTGCCAATGGGCGCACTGCCACCGGGCACACCCAACACAGCCGAGGCGGTGGCGGAGCATAATGCACGCATGAAGGCGCACATGGATGCCGCGATTGAGGATCAAAACTCGAATAAGTCAATGGGCACATCGGATAACTTTGATTTCTCCACGACATCTGATTATTCCGGCCAGCGTTCGGAATCGTCGCAAGGTGATTTCGACGATTTCATGACCATGGACAGCACCGATGACTCACGCGAAAACACGAGCTCCTTAACGCCCTTTGATCGTCGTTTGGCGGACGACTACGCCGACGAACGCATGCATGAGTCCGGCGAACGTGGCGATACTGCTGAGCTGCCCAATCCGATGGCTGCTATGGCAGCTGCAGCGGCTATGGACCTCTCGGCACGTGGTTTCCCCGCTAATGGCGTGACGCAGAAGGCACTCGAACATCACCTACCTATGTTGGGTATGTCACCGAATTTTCTGCTGATGGCAGCGGCGCGCGAAGAAATGCAAATGTTGGGCGCGCATGCCAAGTTTCCGCTATTGCCTTTCGGACCGCTGGGATTTATGGGTCTACATCCACAGACGCATTTGTGTAATGTGTGCTTCAAGATCTTCCCCAATTCGGCCGCATTGGAGCGTCACACGCATAGCGAACATACCAAAGATGTTGCTaatagcacaacaacaacaacaccgacAACAACCACACCAACAGCATTAACTATTTCGtcggctacaacaacaacgactacCCATTCTGGCAACAAGAGCAACAATACAGCGACAACAAGTGCCAACGCTGCATCGCATGATTCAAGTTGTTCCGCGAATTGTGACGGAGCATCACCACCAACATACAATGCGAAGcTTTCAGTGAGCAGTAACCTATTTCCCAAACAAAACAGCAATGAAGAAGACGAAGAACGCGTTACAAATAACAGTACAGCATCcgtaaataatcaaaatagCAACACAACTTCTAAAAACGGTAATTGCTTGACCAAGACAACACAAGCGACTAGCCCTAATGAGTTGGAAACTAGCGAAGCGTCTACACTTCACGAGCGCATTAAGCAAGAACCCGATACAGAAACCGAATGTGAGTCACAACAGTTAAAGACCAATATTTCAAGATCCTCACCTACACCAAGGACGACACCATCGCCTTTGCCACCAGCGCAAACGCTACCAATGCTAACAGGCTGCATACCAACAGCTTCACCAGCCAATAGCACACTGGAACAACAAAGCGGGTCTGGGTCAACACATTCACCATTCGAACTCGCTGTACATCCACATTTGGCCTTGCCGCACAACAACGCCGAGCAGTCGCTCATGCAAATGCAATTACTATCCTCACTTCCGCATGATACCATGCAATCCATGCAACTGCATTATGGCAACGCCCATTACCATCACCACTATCAtcaccaccaccaacaacaacaacaacatcaacaacaccCGCCATCGCATCCAcaccaacaaccacaacaacaattgtcACATAAATCTTTGCTGCCCGCAGATGCACATCGTTTCCCAGCGAGCCCATTGGACTTTCAACAGGCTTTGATGTCGGTCGGTCCACCGAGCTTGAGTGCCGACGCTGCCGCCGCCGCGAATCAGAAGCATTTCTGTCATGTGTGCCGACGAAACTTTAGTTCGAGTTCAGCGCTTCAGATCCATATGCGTACGCATACTGGAGACAAGCCATTCCAGTGCAATGTGTGTCAGAAGGCCTTCACAACCAAAGGAAATTTGAAGGTCCATATGGGTACGCATATGTGGACGAATCCCACATCACGGCGTGGTAGACGCATGTCACTTGAATTACCCTTACATCGCCCTGGTAGCATGCCGAGTGAGACCGATTTCATGCAAAGACGGCCAGAACTATTTTTCCCATATTTACCGCCATTTTTCAATGGATTACCGCCAAAGCCTGGTGATCTAAGTCCTGGCGCTTTTCCGAATCTAACCCCACCACATTTTCCGAATGGCGCAAATGCGGGCAAATATCCACCCGGACTCCTAGGTTTGCCACCATTTCTGGCACCACCTTATAATTTCCCGGGCATGACAACGCAGTCACATGGCGATAACAGTAAATCCCCCACACCAACAAGAGATGATAACAGACATTTGGAGAGCCCTTCACGCGGCTCAACTTTAGATACGACAGCGCCTTGGCATATGttaggaaaaattaaaacagaGAACAATCAAAATGACGAATTGTCAACAACGCCGACGAGTAGTTGTAATCAAATCGACGAGATGCACAACGAAGTGCAACATATAGTGGactaa
Protein Sequence: MCSIFHNRINYRGLRSNSSGSNSSGSISNLSKELDADRNNNGGSGGAGGAVVGSGEHNEHIGDETTCGDEHKAGNQLPLKSANSTPDSAVVDENADPLCNMRAASVELAEQRSSAERDEGEDESEELAGDSNEALDLSVLPSNRLPGSGHVALEALQHTKVAVAQFAASALSGAQNYGEAMNELAMVQSTILNVQRQHLMQLQLIQHLQSQLKRAGDLTMDAEQLEEQQHADDSEHSAPKRRYLQTPPAEAEEKLAEAVTTSVALNAASAHNNLKANEPFNASRPPSTSNEENTKTEERTNKKAREPASKHAKNEEASNTGSTSLAAVGPTLPAHSTANNSNYQPLMCDISSSLASSIITNHDPSPAPNEMNCLEMLQRRTEEVLDSASQSLHASHLQDDYEYAQKDAQGRGEIFKHRCKYCGKIFGSFSALQIHLRSHTGERPFHCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLAPGPGSAVVEQFPTYGAPAGGPLMSGVTPVRLAAPAEDSKQLSCEDPPQIAHKEKHEEHAKIAISNRVTKPEAPISPIDTPQDLSKPHHSPVLHENPSPLEPPSPPPKTSPVLKPSTETKHEKPERTSSQNPPQPNQHTSKRSSNARKRNSHANTSHAGASETRKPHAHDKCERERERMQEGGEFLHKSASALRRSSLSRNSSNSGLEPPHISSEYSLAQMERIIDKSWEDLIEIDTTSETSKLQQLVDNIENKLTDPNQCIFCHKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGVILQQHIRIHTIDDGSGALVGLPGVNINGGMLGAFSLPMGALPPGTPNTAEAVAEHNARMKAHMDAAIEDQNSNKSMGTSDNFDFSTTSDYSGQRSESSQGDFDDFMTMDSTDDSRENTSSLTPFDRRLADDYADERMHESGERGDTAELPNPMAAMAAAAAMDLSARGFPANGVTQKALEHHLPMLGMSPNFLLMAAAREEMQMLGAHAKFPLLPFGPLGFMGLHPQTHLCNVCFKIFPNSAALERHTHSEHTKDVANSTTTTTPTTTTPTALTISSATTTTTTHSGNKSNNTATTSANAASHDSSCSANCDGASPPTYNAKLSVSSNLFPKQNSNEEDEERVTNNSTASVNNQNSNTTSKNGNCLTKTTQATSPNELETSEASTLHERIKQEPDTETECESQQLKTNISRSSPTPRTTPSPLPPAQTLPMLTGCIPTASPANSTLEQQSGSGSTHSPFELAVHPHLALPHNNAEQSLMQMQLLSSLPHDTMQSMQLHYGNAHYHHHYHHHHQQQQQHQQHPPSHPHQQPQQQLSHKSLLPADAHRFPASPLDFQQALMSVGPPSLSADAAAAANQKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSLELPLHRPGSMPSETDFMQRRPELFFPYLPPFFNGLPPKPGDLSPGAFPNLTPPHFPNGANAGKYPPGLLGLPPFLAPPYNFPGMTTQSHGDNSKSPTPTRDDNRHLESPSRGSTLDTTAPWHMLGKIKTENNQNDELSTTPTSSCNQIDEMHNEVQHIVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192996;
90% Identity: iTF_00191532;
80% Identity: -