Basic Information

Insect: Bactrocera latifrons
Gene Symbol: salm
Assembly: GCA_001853355.1
Location: NW:433643-451249[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.8e-06 0.00027 20.7 1.9 1 23 407 429 407 429 0.98

2 8 3.5e-05 0.0019 18.0 3.5 1 23 435 457 435 457 0.98

3 8 7 3.9e+02 1.3 4.7 5 23 728 746 725 746 0.88

4 8 3.6e-08 2e-06 27.4 0.2 1 23 752 774 752 774 0.98

5 8 0.0006 0.034 14.1 0.9 1 23 784 806 784 806 0.98

6 8 0.0018 0.099 12.7 1.7 3 23 1028 1049 1026 1049 0.93

7 8 1.2e-05 0.00066 19.5 5.0 1 23 1379 1401 1379 1401 0.96

8 8 9.4e-08 5.2e-06 26.1 0.7 1 23 1407 1429 1407 1429 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.8e-06	0.00027	20.7	1.9	1	23	407	429	407	429	0.98
2	8	3.5e-05	0.0019	18.0	3.5	1	23	435	457	435	457	0.98
3	8	7	3.9e+02	1.3	4.7	5	23	728	746	725	746	0.88
4	8	3.6e-08	2e-06	27.4	0.2	1	23	752	774	752	774	0.98
5	8	0.0006	0.034	14.1	0.9	1	23	784	806	784	806	0.98
6	8	0.0018	0.099	12.7	1.7	3	23	1028	1049	1026	1049	0.93
7	8	1.2e-05	0.00066	19.5	5.0	1	23	1379	1401	1379	1401	0.96
8	8	9.4e-08	5.2e-06	26.1	0.7	1	23	1407	1429	1407	1429	0.98

Sequence Information

Coding Sequence: ATGTGTTCCATTTTTCATAATCGCATCAACTATCGCGGTTTGCGCAGCAATTCGAGTGGTAGCAATAGTAGCGGCAGCATTAGCAACTTGAGCAAAGAACTGGATGCCGATCGCAATAATAATGGCGGTAGCGGTGGCGCTGGCGGCGCTGTTGTGGGCAGCGACGAACGCACTGAGCAGAACGGCGACGATGCGACTTCTGGGGATGAACGCAAGGTGGACAACCGTTTGCCTTTGAAGAGCGCCAATTCTACGCCCGACAGCGCGGTCGTCGACGAGAACGTCGATCCCCATTGCAATATGCGTGCGGCCAGCGTAGAACTGGCGGAGCAACGTAGCAGTGTGGAAGAGCGCGATGAAGGCGAGGACGAGTCGGAGGAGTTGGCGGGCGACAGCAATGAGGCGTTGGATTTGTCTGTGCTGCCRAGCAATCGACTGCCCGGTAGCGGTCACGTGGCATTGGAGGCTTTACAACACACCAAAGTGGCGGTGGCRCAATTTGCCGCCTCAGCGCTMAGCGGCGCACAAAATTACGGCGAAGCGATGAACGAGCTGGCGATGGTGCAATCGACGATACTGAACGTGCAACGGCAACATCTAATGCAACTGCAGCTAATACAACATCTGCAGAGTCAACTGAAGCGCGCTGGCGATCTGACAATGGATGCCGAGCAGCTGGAAGAGCAACCGCTAGCAGATGAGTCCGAGCCAAAGCGTAAATACTTGCAAACGCCACCGGCGGAAGCGGAGGAGAAGCTGGCGGAAGCTGTAGCTACAAGTGTGGCATTGAATGCAGCAAGTGCGCAAAACGACTTGAAAGCCAATGAGCCGTTCAGCGTGTCGCGGACGCCATCTGCGTTAAATGAAGAGAACACAAAGACTGAAGAGAGAACAAATAAGAAGGCGAAGGAGCCGGCGTTAAAGCATGCCAGAACTGAGGAAGCTAGTAATACAGGCAGTACTAGTCTGGGTGCTGTTGCACATAGCACCAGCAATTATCAACCCTTGATGTGYGATATTAGCTCCTCGCTCGCTTCTAGTATTATCACGAATCATGATCCATCGCCTGCACCGAATGAGATGAACTGCTTGGAGATGTTGCAACGCCGCACCGAGGAGGTGCTCGATTCGGCCTCACAAAGCTTGCATGCCTCACACCTACAAGACGAGTATGAGTACGCGCAGAAGGATGCGCAGGGTCGTGGTGAGATATTTAAACACCGCTGCAAATATTGTGGTAAGATCTTCGGCTCCTTCTCGGCACTGCAGATACACTTGCGCTCACACACTGGCGAGCGACCTTTTCACTGCAACGTCTGCGGCAGCAAATTTACAACSAAGGGCAATCTGAAGGTTCACTATCAACGGCACACACAGATATTTCCGCCCATGTTGCTGGCGCCTGGACCGGGTGGTGCTGTTGTGGAACAGTTTCCAACTTATGGCGCACCAGCTGGCGGTCCGCTAATGTCAGCTGTGACACCAGTGAGATTATCTGCGCCAGCAGATGACAGCAAGCAGCTGAGTTGTGAAGATCCGCCACAAATTGCACGCAAAGAAAAGCATGAGGAACACGCAAAAATCGCAATAAGCAATCGTGTGAGTAAGCCGGAAGCGCCAAATTCACCTATTGACACGCCGCAAGACCTAAGCAAGCCRCACCATTCGCCTGTGTTGCATGAACACCCGTCTCCTCTCGAGCCGCCAAAGTCACCAAAGACCTCACCRCTATTGAAACCAAGCACAGAGACAAAGCTTGAGAAACCGGAACGCACGAGCAGTCAAAACCCGCCACAAACCAATCAGCATGCGTCCAAGCGTAGCAGTAGTGCGCGGAAACGTAACTCACACGCCAATRCGTCACATGSCGGCGYYAGCGAAACGCGTAAGCCACATGCACACGACAAGTGCGAACGCGAGCGCGAACGCATGCTGGAAGGTGGTGAGTTTCTGCACAAATCCGCATCGGCCTTACGACGCTCATCGCTGAGTCGTAACTCCAGCAATAGTGGGCTCGAGCCGCCGCATATCTCATCCGAATACTCGCTGGCGCAGATGGAACGCATTATCGACAAATCGTGGGAGGATCTCATCGAGATCGATACCACGTCGGAGACTTCGAAGCTGCAACAGCTAGTGGATAATATCGAgaacaaactgaccgatccgaATCAATGCATCTTCTGTCACAAAGTGATGTCCTGCCGCAGCTCATTGCAAatgcacatacgcacacataccgGCGAGCGACCGTTTCGTTGTAAAATTTGCGGACGTGCCTTCGCCACCAAGGGTAATCTGAAGGCACACATGAGCATACACAAAATCAAACCGCCAATGCGTAGCCAATTCAAATGTCCCGTCTGTCATCAGAAGTTCTCGAATGGCGTCATAYTGCAAcaacacatacgcatacacacgATCGACGACGGCAGCGGCGCTTTGGTCGGCCTACCGGGGGTCAATATAAATGGTGSCATGCTAGGCGCATTTTCACTGCCAATGGGCGCACTGCCACCGGGTACACCCAACACAGCTGAGGCGGTGGCGGAACATAATGCACGCATGAAGGCGCACATGGATGCCGCGATTGAGGACCAAAACTCGAATAAGTCAATGGGCACATCGGATAACTTTGATTTCTCCACGACATCCGATTACTCCGGTCAGCGTTCGGAATCGTCGCAAGGTGATTTCGATGATTTTATGACCATGGACAGCACCGATGACTCACGTGAAAACACGAGCTCCTTAACGCCATTTGATCGTCGTTTAGCGGACGATTACGCCGACGAACGCATGCATGAGTCCGGCGAACGTGGCGATGCTGCTGAGCTACCCAATCCGATGGCTGCCATGGCCGCTGCAGCGGCTATGGACCTCTCGGCACGTGGTTTCCCCGCTAATGGCGTGACGCAGAAGGCGCTCGAACATCATCTACCCATGTTGGGTATGTCACCGAATTTTCTGCTGATGGCAGCGGCGCGCGAAGAGATGCAAATGTTGGGCGCGCATGCCAAGTTTCCGCTATTGCCTTTCGGACCGCTGGGATTTATGGGTCTACATCCACAGACGCATTTGTGTAATGTGTGCTTTAAGATCTTCCCCAATTCGGCCGCATTGGAGCGTCACACGCATAGCGAACATACCAAAGATGTTGCtaatagcacaacaacaacaacgacgacaacCACACCAACAGCATTAACTAATTCgtcagctacaacaacaacgactacCCATTCGGACAMCAAGAGCAACAATACAGCGACAACAAGTGCCACCGCGGCAGTGCATGACTCAAGTCGTTCCGCGAATTGCGATGGAGCATCACCGCCAGCATATAATGCGAAGctTTCAGTGAGCAGTAATCTATTCCCGAAACAAAACAACAGTGAAGAAGACGAAGAACCCCTTACAAATAACAGTATAACAactataaataatcaaaatagcAACACAGCTGCTAAAAACGGTAATTGTTTGACTAAGACAACACAAGCGGCTAGCCCTAATGAGTTGGAAACTAGCGARGCGTCTACACTCCACGAGCGCATTAAACAAGAGCCTGATACAGAGACCGAATGTGAGTCACAACAGTTGAAGACCAATATTTCAAGATCCTCACCTACACCAAGGACGACACCATCGCCTTTGCCACCAGCGCCAACGTTACCAATGATAACGGGCTGCATACCAGCAGCTTCACCAACCAATAGCACACTGGAGCAACAAAGCGGTTCTGCGTCAACACATTCACCCTTCGAGCTCGCTGTACATCCACATTTGGCCTTGCCGCACAACAACGCCGAACAATCGCTGATGCAAATGCAATTGCTATCCTCACTTCCGCATGATACCATGCAAACCATGCAACTGCATTATGGCAACGCCCATTACCATCACCACTAtcatcaccaccaccaccaacaacaacaacaacaacaacaaccacatcaaCAACACCCGCCATCGCATCCAcaccaacaaccacaacaacaattgtcACATAAATCTTTGCTGCCCGCAGATGCACATCGTTTTCCGGCGAGCCCATTGGACTTTCAACAGGCGCTGATGTCGGTCGGTCCACCGAGCTTGAGTGCGGACGCTGCCGCCGCCGCGAATCAGAAGCATTTCTGTCACGTGTGTCGACGAAACTTTAGTTCGAGTTCGGCGCTTCAGATCCATATGCGTACGCATACTGGGGACAAGCCGTTCCAGTGCAATGTGTGTCAGAAGGCCTTCACAACCAAAGGAAATTTGAAGGTCCATATGGGCACACATATGTGGACGAATCCCACATCCCGGCGTGGTAGACGCATGTCACTTGAATTACCCTTACATCGTCCTGGAAGTATACCGAGTGAGACCGATTTCATGCAAAGACGTCCAGAACTGTTTTTCCCATATTTGCCGCCATTTTTCAATGGATTACCGCCAAAGCCTGGTGATCTAAGTCCTGGCGCATTTCCGAATCTAACACCACCACATTTTCCGAATGGCGCAAATGCTGGCAAATATCCACCCGGACTCTTAGGTTTGCCACCATTTCTGGCACCACCTTATAATTTCCCGGGCATGACAACGCAGTCACATGGCGATAACAGTAAATCCCCCACACCAACAAGAGATGACAACAGACATTTGGAGAGCCCTTCGCGCGGCTCAGCTTTAGATACGACAGCGCCTTGGCATATGttaggaaaaattaaaactgagaaCAATCAAAATGACGAATTGTCAACAACGCCGACGAGTAGTTGTAATCAAATCGATGAGATGCACAACGAAGTGCAACATATAGTGGATTAG
Protein Sequence: MCSIFHNRINYRGLRSNSSGSNSSGSISNLSKELDADRNNNGGSGGAGGAVVGSDERTEQNGDDATSGDERKVDNRLPLKSANSTPDSAVVDENVDPHCNMRAASVELAEQRSSVEERDEGEDESEELAGDSNEALDLSVLPSNRLPGSGHVALEALQHTKVAVAQFAASALSGAQNYGEAMNELAMVQSTILNVQRQHLMQLQLIQHLQSQLKRAGDLTMDAEQLEEQPLADESEPKRKYLQTPPAEAEEKLAEAVATSVALNAASAQNDLKANEPFSVSRTPSALNEENTKTEERTNKKAKEPALKHARTEEASNTGSTSLGAVAHSTSNYQPLMCDISSSLASSIITNHDPSPAPNEMNCLEMLQRRTEEVLDSASQSLHASHLQDEYEYAQKDAQGRGEIFKHRCKYCGKIFGSFSALQIHLRSHTGERPFHCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLAPGPGGAVVEQFPTYGAPAGGPLMSAVTPVRLSAPADDSKQLSCEDPPQIARKEKHEEHAKIAISNRVSKPEAPNSPIDTPQDLSKPHHSPVLHEHPSPLEPPKSPKTSPLLKPSTETKLEKPERTSSQNPPQTNQHASKRSSSARKRNSHANXSHXGXSETRKPHAHDKCERERERMLEGGEFLHKSASALRRSSLSRNSSNSGLEPPHISSEYSLAQMERIIDKSWEDLIEIDTTSETSKLQQLVDNIENKLTDPNQCIFCHKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGVILQQHIRIHTIDDGSGALVGLPGVNINGXMLGAFSLPMGALPPGTPNTAEAVAEHNARMKAHMDAAIEDQNSNKSMGTSDNFDFSTTSDYSGQRSESSQGDFDDFMTMDSTDDSRENTSSLTPFDRRLADDYADERMHESGERGDAAELPNPMAAMAAAAAMDLSARGFPANGVTQKALEHHLPMLGMSPNFLLMAAAREEMQMLGAHAKFPLLPFGPLGFMGLHPQTHLCNVCFKIFPNSAALERHTHSEHTKDVANSTTTTTTTTTPTALTNSSATTTTTTHSDXKSNNTATTSATAAVHDSSRSANCDGASPPAYNAKLSVSSNLFPKQNNSEEDEEPLTNNSITTINNQNSNTAAKNGNCLTKTTQAASPNELETSEASTLHERIKQEPDTETECESQQLKTNISRSSPTPRTTPSPLPPAPTLPMITGCIPAASPTNSTLEQQSGSASTHSPFELAVHPHLALPHNNAEQSLMQMQLLSSLPHDTMQTMQLHYGNAHYHHHYHHHHHQQQQQQQQPHQQHPPSHPHQQPQQQLSHKSLLPADAHRFPASPLDFQQALMSVGPPSLSADAAAAANQKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSLELPLHRPGSIPSETDFMQRRPELFFPYLPPFFNGLPPKPGDLSPGAFPNLTPPHFPNGANAGKYPPGLLGLPPFLAPPYNFPGMTTQSHGDNSKSPTPTRDDNRHLESPSRGSALDTTAPWHMLGKIKTENNQNDELSTTPTSSCNQIDEMHNEVQHIVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192996;
90% Identity: iTF_00193770;
80% Identity: -