Basic Information

Gene Symbol
-
Assembly
GCA_016617805.2
Location
NC:12572931-12576973[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.041 33 4.3 0.0 17 46 190 221 178 221 0.77
2 5 7.9e-11 6.4e-08 32.2 0.2 1 44 227 271 227 273 0.94
3 5 3.2e-07 0.00026 20.7 0.1 2 46 282 330 282 330 0.90
4 5 6.8e-10 5.6e-07 29.2 0.0 2 46 337 382 336 382 0.92
5 5 9.1e-09 7.4e-06 25.6 0.0 3 45 390 433 389 434 0.95

Sequence Information

Coding Sequence
ATGTTGAAAACTCTGCCTCTGAAGATGGTAGCGTTGAAGatTGGTCGGATTCTGAAATGGAGGAGGAATCCAGCGCCGACTATGCGGCATTCAGTGCCAGATACATGGGAGATGCAGCAACGTCTGCAAGAAGTGCGAAAACGTTTGCAGGTCTTATTACAAGTTGTTCAACAGCGATACCTTTCAAACGAGCAACGACTGAAAATGAATTTGTGCAAAAAAGAACGGGGATTTGGAATGCGCGGTGCCTACCTTAAAGGAGGCACtttcttttttaaaggaaatatgttttttaaagaCCTTAAATGTCGGAACTGTCCAAACAATCAAGATTACGAATATCGTAAGAATGTGGAAAACGAAATGTTCCCAATGGACTTTGAGTTATGTAGCCGCCATGTTTGGTCATTATTGGACAAAAAAGCTGTGGTCCAAGCAGTGAAAGAACAGGTAGTGGACTACTTAGCAGATCACCAAATTCGAGACAAAAGTAATAAATCGAAAAAACTCACACTAGATATAAGAGTTCACACAGAGAAGTTGGCAAATCTTTTAACACAAGTAGATGAAAAATTCCAGGTTGATTGGGTACAAGTGTCTGCACATAACTTAAACTATCGACATTCACCGAGCAGTTGTAAGACAATGTGGCAAGTATACTTGCATCCATCGCTTAAACGTAGCGCTTGGTCTGAAGAAGAAAATAAACGACTCTTACATGTAGCGCAAATTCATAATTATCAAAATTGGGACAAAATCGCCAAATCAGTTTCGAAACGTTCTGATTATCAATGCTTTATACAATATCAAACGGCCGTTTGTTTTATGGACACTCAACGTTGGGGTCGTTGGGATAAACGTGATGATATTAAGTTACTAAAATTAATAGAGAAAAAGTCCATAAACGGAGTAATCGATTGGAATGTAGTGGCGTCTTATTTTCCCCACAAACCGAAAAAATCATTACATCAacgttatatatattatttggaTCCAAAGATTAGTCATGAACCATTTTCCCCTGAAGAAGACCTCATATTGTTGGCAGCGGTTAAAGAATATGGagaaaaatttgcattatttccACGTACACTTTTTCCAAATCGCTCTATAACACAGCTTCGTATGCGTTACAGAAATACATTACAAACTCGTCATAAGCTAACACCCTGGTCTGTAGAGGATGATAAGAAACTTATGGAGTTTATAGCTGAGTATGGTACATCTGCTTGGCTTCGTTGTGCTGGAGCTCTTGGAAACCACAATCGTATTAGCTGTCGAACACGTTTCCTTACTATAAAGaagttttttgccaaaaatccagAGGCTACACTTGAAGACATACCCAGAAAAAAGACATGTACAATGAAGAATAGCGTTATTACAACCCAAAATTGGGTCGAAAAAGTCGCAGAATTGCGAGAAAATCCCGACACTGTGCTTGTACCAACAAATCAGAAAATTAAGAAACTTAAAGAAAAGGTTGATAAGTTTGAAGAAGTGCTCAAAACTAAAGACCCTCCAAAATGCGAAGTGCAATCGTTGAGAAAAATTGGGAAAAAAGTACGGAAAATATCATATGTGGAACGTTTGCGTGCTGTTGAACAAATGCTCTatcatttctttaaatattcttataattttaGTTTAGGTGCTGATGTATGTATTAAACAACCAAATGAATTATTACGTTTTGTGGCAACATCACTCGATTTTAAGACGGACTCTCCACAGCCATATATTGCGAACAGTTCGCTATTACCGCATATTGAACGCCGTTGCGCATTTTATCTATATCCGAAAAACCAAATTGCAAACGAATCTGTATGTGAGTCCTTCAACTATATATTTCCACCAAGTTGGTCGACAGCAATGGCCTTCCGAGCACTATGCGTGCAATCGGCTCAGGTGCAATTAGAGGGATGTAAATCTGTAGATAACAGCTATGACCGCAAACCAagtgaaaatgagaaaaatatagCGATACAGAAATTTCGTAAACGCATGCGTGCATTACTCTATCAAACAGCCCTATTAAGTCGTTTACAACCAACTCGATTTACCGAACTAATGAGTATCAGCACACCGCCTGTAACATTAACAGAAATAACGCCTGCAGATTTCAGAGATGATACCGCCACAAGTACAATTGCAACTTTAGCAAGTCAGCCGGCGTTGGATTTAACTTGTGTGAAAAACGAGTGTTCATCTGAATTTTTGGGTAATCCGGAACACTTTTCGGAGGCATTGTACAAACGTACTTCACTGGATGAGGTTTCGAAAAGTGAGAAAAAACCACGACGAACGTCGAAACCGGTTGGTCGAAAAAGAAAGTTACAAACAACACCATCTGAAACCACAACAGcaGTAATGGCGGTGGCCGAGAAAACTATGTTGTTAGACGTTGAATTTTCAGAAAGTGGTAATGCGTTTGCTTCTAAAGCAGCAAATATACAACCAGTTCTTTATGATATTAAACAAGAGCATCAAACTTGTGCTGCAGCGGCATCTAACCAAGGTTTAAACTCGTGCATTATGACACGAAATGGCAAATTTTCAGAAAGTCCGTCTTCAGAGCCGGCGGGGAAACGAATTCTAATTGATGCAAAACGTGATAAATCAGATTTCGTTGAGCCTAATATCAAAACTGAGCTGGAGCTATAG
Protein Sequence
MLKTLPLKMVALKIGRILKWRRNPAPTMRHSVPDTWEMQQRLQEVRKRLQVLLQVVQQRYLSNEQRLKMNLCKKERGFGMRGAYLKGGTFFFKGNMFFKDLKCRNCPNNQDYEYRKNVENEMFPMDFELCSRHVWSLLDKKAVVQAVKEQVVDYLADHQIRDKSNKSKKLTLDIRVHTEKLANLLTQVDEKFQVDWVQVSAHNLNYRHSPSSCKTMWQVYLHPSLKRSAWSEEENKRLLHVAQIHNYQNWDKIAKSVSKRSDYQCFIQYQTAVCFMDTQRWGRWDKRDDIKLLKLIEKKSINGVIDWNVVASYFPHKPKKSLHQRYIYYLDPKISHEPFSPEEDLILLAAVKEYGEKFALFPRTLFPNRSITQLRMRYRNTLQTRHKLTPWSVEDDKKLMEFIAEYGTSAWLRCAGALGNHNRISCRTRFLTIKKFFAKNPEATLEDIPRKKTCTMKNSVITTQNWVEKVAELRENPDTVLVPTNQKIKKLKEKVDKFEEVLKTKDPPKCEVQSLRKIGKKVRKISYVERLRAVEQMLYHFFKYSYNFSLGADVCIKQPNELLRFVATSLDFKTDSPQPYIANSSLLPHIERRCAFYLYPKNQIANESVCESFNYIFPPSWSTAMAFRALCVQSAQVQLEGCKSVDNSYDRKPSENEKNIAIQKFRKRMRALLYQTALLSRLQPTRFTELMSISTPPVTLTEITPADFRDDTATSTIATLASQPALDLTCVKNECSSEFLGNPEHFSEALYKRTSLDEVSKSEKKPRRTSKPVGRKRKLQTTPSETTTAVMAVAEKTMLLDVEFSESGNAFASKAANIQPVLYDIKQEHQTCAAAASNQGLNSCIMTRNGKFSESPSSEPAGKRILIDAKRDKSDFVEPNIKTELEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00190602;
80% Identity
-