Basic Information

Gene Symbol
TFCP2
Assembly
GCA_016617805.2
Location
NC:33236967-33284521[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.4e+04 -6.4 4.8 3 61 106 165 104 175 0.48
2 3 1.6e-52 1.1e-48 165.1 0.1 13 187 425 596 412 606 0.90
3 3 1.8e-13 1.2e-09 37.4 0.6 188 222 644 678 636 679 0.92

Sequence Information

Coding Sequence
ATGGCGCTTTCGCTGCTTTCACAACATCAGCAGCAGCCAAATTATTTCGATTTGCAAACATTATTTGATCCATATCcattacaacaacatcaacaacaacacccCCAATACCCCTATAATTATCACCAACAACAAGATTTGCAActccagcagcaacaacagtacAATCACCAATTGCATatagagcagcagcagcagcaattacATTTGCCGGCGCCCAAAAGCTCAGGAATCAACGATTCGACTTTGAAAGCCGATCCGACTACAGAACCAATAAGTTTTTGTTCAGATCAAATGGAATACCCCGCCAGCAATCTTCATCAGAATCATAATCATTATCAACAGCAGCAAAGTAGAAATAGTAACGAAAACATTAACCACACTAATAACACCAATATTAATAGCAGTATCGGCAATAACAGAAAGACCAGCAACATTAcgcataataacaacaataatccAatattaaacaaaacaaaccGTTATTACGTGAACGGCTATTCACAACATCAAGTGGCATCAGATTATGTCATCACTTTCGTAGATTCTCCACCGAATTCGGAGGAATCCTGGACTGACGAGAATACAAAAGAGTCCCCTGGACCTCAAATAATCGACGTGCAGACAATTTACTCAAATAGTGGATCGCGAAAGAGACGAATGGATTGGGACTCATTGGACATTGGTCAAAGTGGAAACACAACTACTACACAGTCTGGAGAATTGGCTTCTAAAATTCCACATCACGATAAAGACAAGGTCAAAAAGGATAAAACGACAGGACGCGGCAGTTGGACTGAAGATATTGGATTTGATTTGAATACAGACTTCAATAGTAATTCTTATCTCAGCAATGAatcctttttatcattttccCCGGCCCTGACAGTATTGAAACAGGAGCCTCAATCCGATCAATTGAAGGCTAATAAAAGTCCATTGAATACTCATCCTATCGTAACTGGCAGTGGTGGAAGCGTGCCAAAACTCGATAAGCCGCCAGCGCACATAGAAACGGTACCAACAACCGATAATACACCTAAGAATGCCTTGAACAACACTCTTTGCGGATGTGGTTCACCAAAGACCAGCACACCACAGGAAATCGAACACAACGGAAACAATATTGACAAGTCCAACGGCGGTGCATCCAACGCATTCGGTAATGTTGGCTCACCTTACAGCTGCGGCGAAAAAACAATCGCGCAAGGAAATTCAGCGTCCCAACAATTATCCGAAGTCGATGGGAGCAAAATTGAGAACAGTACTGGTCGAGGTGCTGCTAATGGAAATAATACCAATGCACACTCTGATGACCACAAATTTCAGTACATTTTGGCAGCTGCAACCTCAATAGCCACCAAGAATAATGAAGAAACGCTTACCTATTTAAACCAGGGACAAAGCTACGAAATCAAGCTTAAGAAGATCGGTGATTTATCGTTTTATCGCGATAAAATATTGAAGAGTGTCATCAAAATATGCTTCCATGAGCGTCGCCTACAATTTATGGAACGTGAGCAAATGCAACAGTGGCAAGCTTCTCGACCTGGTGAACGGATTATTGAAGTAGACGTTCCACTTTCATATGGGCTATGTCATGTATCGCAACCGTTAAATCCGAACTTCTTGAATACTGTGGAAATCTTCTGGGATCCCTTAAAGGAAGTAGGCGTTTACGTTAAAGTGAACTGCATTTCAACTGAGTTCACACCCAAAAAACATGGAGGAGAAAAAGGAGTGCCATTTCGACTACAAATTGAAACTTATATAGAATCAACCAACTCTACCGGAGGAGCAACGGCATCAGCAATATCGGCTGGTGCTTTATCAATTGCATCTAGTTCAGTATCAGCTGGGATAGCATCAGCGTCTATGCCGACCGGTACTAATATACCATCGGGGAACAACCACTCGCTCATAAGTGGCAAGCAACCGGTACATGCAGCAGCATGTCAAATCAAGGTATTCAAGTTAAAAGGTGCTGATCGTAAACATAAACAGGATCGCGAGAAAATTCAAAGGCGCCCTCAAGCAGAGCAAGACAAATTCCAGCCAAGTTATGAGTGCACAATTATGAACGACATACCTCTGGATATATTAGCACCCACAACATCGGGTTGCTTTAGCCCTGAATaTATGAAGATTTGGCCCAATTCACCGGTACACATTCCCAAGTACGATGGCATATTGCCGTACACTGGAGGATCACCTGTTACCAACTCCAGTCCCATAGCCATAAATAGTGTTACTTCAACAAATTCTCCAACGCTGAAACTAATGGAAGCTAACATGGTGTCTCCGCAGCAGTCGGTCACGCCAGACGTGGATGACTACGCAATCAACATTTTGCCAGAATCCTCTCCAAGCCAAGTTGCGCAATGGTTGAGCCACCATAGATTGACTTCTTACCTGTCAACCTTTTCACACTTTTCCGGTGCCGACATAATGAGGATGTCTAAAGAGGATTTGATTCAAATATGTGGGCTTGCCGATGGAATTCGCATGTTCAACATATTACGCGCTAAaGCTATTGCACCGCGTCTTACACTTTATGTAAGTTTGGATGGCAATAGCTACAATGCCATATACTTGCTATCGAACACATCAAAGGAGCTAATGCAGAAATTGTGCAAAATGCCTGGATTCTACGACATGATTGCAAATGGCAACACAAATGGTGCATTAGAAAATGGCTCGATTTACAGTAGCTGGAGCATACACTCGAAATATTCCGGCAGCggttcaaatattttcaatgatagcaccaaaaactttatttttctaGCAGGCCCTTCAGGCGTACATGTAAACGTCACTGACGAGGTATTGAATAATGAGGTGAGAGACGGAAGTCTTTATGCTCTCGAAGTACAAAATGGTAAAGTTGTTATGaagttgataaataaaaatgataattga
Protein Sequence
MALSLLSQHQQQPNYFDLQTLFDPYPLQQHQQQHPQYPYNYHQQQDLQLQQQQQYNHQLHIEQQQQQLHLPAPKSSGINDSTLKADPTTEPISFCSDQMEYPASNLHQNHNHYQQQQSRNSNENINHTNNTNINSSIGNNRKTSNITHNNNNNPILNKTNRYYVNGYSQHQVASDYVITFVDSPPNSEESWTDENTKESPGPQIIDVQTIYSNSGSRKRRMDWDSLDIGQSGNTTTTQSGELASKIPHHDKDKVKKDKTTGRGSWTEDIGFDLNTDFNSNSYLSNESFLSFSPALTVLKQEPQSDQLKANKSPLNTHPIVTGSGGSVPKLDKPPAHIETVPTTDNTPKNALNNTLCGCGSPKTSTPQEIEHNGNNIDKSNGGASNAFGNVGSPYSCGEKTIAQGNSASQQLSEVDGSKIENSTGRGAANGNNTNAHSDDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLNPNFLNTVEIFWDPLKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIESTNSTGGATASAISAGALSIASSSVSAGIASASMPTGTNIPSGNNHSLISGKQPVHAAACQIKVFKLKGADRKHKQDREKIQRRPQAEQDKFQPSYECTIMNDIPLDILAPTTSGCFSPEYMKIWPNSPVHIPKYDGILPYTGGSPVTNSSPIAINSVTSTNSPTLKLMEANMVSPQQSVTPDVDDYAINILPESSPSQVAQWLSHHRLTSYLSTFSHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKAIAPRLTLYVSLDGNSYNAIYLLSNTSKELMQKLCKMPGFYDMIANGNTNGALENGSIYSSWSIHSKYSGSGSNIFNDSTKNFIFLAGPSGVHVNVTDEVLNNEVRDGSLYALEVQNGKVVMKLINKNDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01562523;
90% Identity
iTF_00192572;
80% Identity
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