Basic Information

Gene Symbol
Ubp1
Assembly
GCA_001188975.4
Location
LGAM02005857.1:267652-321355[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.31 3.2e+03 -2.6 1.0 97 138 109 151 87 164 0.54
2 3 4.4e-52 4.5e-48 163.6 0.1 15 182 426 590 412 604 0.91
3 3 9.2e-14 9.5e-10 38.3 0.0 188 222 643 677 611 678 0.85

Sequence Information

Coding Sequence
ATGGCGCTTTCGCTGCTTTCGCAACATCAGCAGCAGCCAAATTATTTCGATTTGCAAACTTTATTTGATCCATATCcattacaacaacatcaacaacaacagccccAATACCCCCATAACTATTACCAACAACAAGATTTgcaacatcagcagcaacaacaatacaataacCAATTGCATATACAGCAGCAGCTGCACCTACAACATTTGTCGGCGCACAAAAACTCAGGAATCAACGATTCGACTTTAAAAACCGATCCGACAACAGAACCAATAAGtttttgttcagatcaaatgGAATACGCCACCAGCAATCTTCAGCAGAATCATTATCAGCAGCAGCAAAGTAGAAATAGTAACGAAAATATTAACAACACCAATATTAATAGTAATAGCAGTATTGGCAATAGCAATAACAGAAAGACCAGCAACATCACGCATAATAGCAACAATAGTCAAatattaaataaaacaaaccgTTATTACGTGAATGGCTATTCACAACATCAAGTAGCATCAGATTATGTCATCACTTTCGTAGATTCTCCACCCAATTCGGAGGAATCGTGGACCGACGAGAACACAAAAGAATCGCCTGGACCTCAAATAATCGACGTGCAGACAATTTACTCAAACAGTGGATCGCGAAAGAGACGAATGGATTGGGACTCATTGGACATTGGTCAAAGTGGAAACACAACTACTACACAGTCTGGAGGATTAGCTTCTAAAATTCCTCATCACGATAAAGACAAGGTCAAAAAGGATAAAACGACAGTTCGCGGCAGTTGGACTGAAGATATTGGATTTGATTTGAATACAGACTTCAATAGTAATTCTTATCTCAGCAATGAATCCTTTTTATCATTCTCCCCGGCCCTGACAGTATTAAAACAGGAGCCGCAAGCCGATCAGTTAAAGGCTAATAAATGTCCATTGAATACTCATCCTGTCGTAACTGGCAGTGGTGGAAGCGTGCCAAAACTCGATAAGCCACCATCACATATAGAAACGGCACCAACAATCGAGGACACACCTAAGAATGCCTTGAACGACATTCTCTGCGTATGTGGTTCGCCAAAAACCGGCACACCACAGGAAATCGAACACAACGGAAACAAaattgacaagtccaacgcggGAGCATCCAATGCATTTGGTAATGTTGGCTCACCTTACAGTGGCGGCGAAAAAATAATTGCACAAGGAAACTCAGCGTCCCAACAACTGACCGAAGTCGATGGGAGCAAAATTGAGAACAGTACTGGTGGAGGTGCCGCTAATGGAAATAATACCAACGCGCACTCTGATGACCATAAATTTCAGTACATTTTGGCAGCTGCTACCTCAATAGCCACCAAGAATAATGAAGAGACGCTTACCTATCTGAACCAGGGACAAAGCTATGAAATCAAGCTTAAGAAGATCGGTGATTTATCGTTTTATCGTGATAAAATATTGAAGagTGTTATCAAAATCTGCTTCCATGAGCGTCGCCTACAATTTATGGAACGTGAACAAATGCAACAGTGGCAAGCTTCACGCCCTGGGGAACGAATTATTGAAGTAGACGTTCCACTGTCATATGGACTATGTCATGTATCACAACCGTTAAATCCGAACTTCTTGAATACTGTCGAAATTTTCTGGGATCCTTTGAAGGAAGTAGGAGTTTACGTTAAAGTGAACTGCATTTCAACTGAGTTTACCCCCAAAAAACATGGAGGAGAAAAAGGAGTGCCATTTCGATTACAAATTGAAACTTATATAGAATCAACCAACCCTACCGGAGGAACAACAGCATCAGCAATATCGGCTGGTGCTTTATCAATTGCATCTACTTCGGTATCAGGCGGGATAGCATCAGCACCTATCCCGGCCGGAATTAATATACCATCGGGGAACAACCACTCGCTCGTAAATGGCAAGCAACCCGTTCATGCAGCAGCTTGCCAAATCAAGgTATTCAAGTTAAAAGGCGCTGATCGTAAACATAAGCAGGATCGCGAGAAAATTCAAAGGCGCCCTCAAGTAGAGCAAAACAAATTCCAGCCAAGTTATGAATGCACTATTATGAACGACATACCTCTGGATGTATTACCACCCACAACATCGGGTTGCTTTAGCCCTGAATATATGAAGATTTGGCCCAATTCACCGGTACACCTTCCCAAGTACGATGGCATATTGCCGTACACTGGCGGATCAGCTGTTACCAACTCCAGTCCCATAGCCATAAATAGTGTTACTTCAACGAATTCGCCAACGCTGAAACTAATGGAAGCTAACATGGTGTCGCCTCAGCAGTCGGTCACGCCAGACATGGATGACTACGCAATCAACATTTTACCAGAATCCTCTCCAAGCCAAGTTGCGCAATGGCTGAGCCACCATAGATTGACCTCTTACCTGTCAACCTTTGCACACTTTTCCGGTTCAGATATAATGAGgATGTCTAAAGAGGATTTGGTGCAAATATGCGGGCTTGCCGATGGAATTCGCATGTTTAACATATTACGCGCTAAaACTATTGCACCGCGTCTAACACTTTATGTAAGTTTGGATGGCAATAGCTACAATGCCATATACTTGCTATCGAACACTTCAAAGGAGCTAATGCAGAAATTGTGCAAACTGCCTGGATTCTACGAGATGATTGCAAATGGCAACACAAATGGACCATTAGAAAATGGCTCAATTTACAGTAGCTGGAGCATGCACTCAAAATATTCCGGCAGtggttcaaatattttcaatgatagcactaaaaactttatttttctaGCAGGCCCTTCAGGCGTACATGTAAACGTCACTGACGAGGTATTAAATAATGAGGTGAGAGACGGAAGTCTTTATGCCCTCGAAGTACAAAACGGTAAAGTTGTTATGAAATTGATAAACAAAAATGATAATTGA
Protein Sequence
MALSLLSQHQQQPNYFDLQTLFDPYPLQQHQQQQPQYPHNYYQQQDLQHQQQQQYNNQLHIQQQLHLQHLSAHKNSGINDSTLKTDPTTEPISFCSDQMEYATSNLQQNHYQQQQSRNSNENINNTNINSNSSIGNSNNRKTSNITHNSNNSQILNKTNRYYVNGYSQHQVASDYVITFVDSPPNSEESWTDENTKESPGPQIIDVQTIYSNSGSRKRRMDWDSLDIGQSGNTTTTQSGGLASKIPHHDKDKVKKDKTTVRGSWTEDIGFDLNTDFNSNSYLSNESFLSFSPALTVLKQEPQADQLKANKCPLNTHPVVTGSGGSVPKLDKPPSHIETAPTIEDTPKNALNDILCVCGSPKTGTPQEIEHNGNKIDKSNAGASNAFGNVGSPYSGGEKIIAQGNSASQQLTEVDGSKIENSTGGGAANGNNTNAHSDDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLNPNFLNTVEIFWDPLKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIESTNPTGGTTASAISAGALSIASTSVSGGIASAPIPAGINIPSGNNHSLVNGKQPVHAAACQIKVFKLKGADRKHKQDREKIQRRPQVEQNKFQPSYECTIMNDIPLDVLPPTTSGCFSPEYMKIWPNSPVHLPKYDGILPYTGGSAVTNSSPIAINSVTSTNSPTLKLMEANMVSPQQSVTPDMDDYAINILPESSPSQVAQWLSHHRLTSYLSTFAHFSGSDIMRMSKEDLVQICGLADGIRMFNILRAKTIAPRLTLYVSLDGNSYNAIYLLSNTSKELMQKLCKLPGFYEMIANGNTNGPLENGSIYSSWSMHSKYSGSGSNIFNDSTKNFIFLAGPSGVHVNVTDEVLNNEVRDGSLYALEVQNGKVVMKLINKNDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01562523;
90% Identity
iTF_00191132; iTF_00193316;
80% Identity
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