Bole003352.1
Basic Information
- Insect
- Bactrocera oleae
- Gene Symbol
- ZNF217
- Assembly
- GCA_001188975.4
- Location
- LGAM02038715.1:11336507-11338286[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1e-09 7.1e-06 26.3 0.0 12 49 221 258 216 262 0.94 2 6 0.99 6.9e+03 -2.5 0.1 22 52 339 368 336 370 0.63 3 6 0.42 2.9e+03 -1.3 0.1 26 46 371 391 362 399 0.79 4 6 1.1 7.6e+03 -2.7 0.0 21 30 394 403 384 409 0.80 5 6 0.36 2.5e+03 -1.1 0.1 21 43 422 444 416 451 0.78 6 6 0.21 1.5e+03 -0.4 0.1 22 45 451 474 445 481 0.81
Sequence Information
- Coding Sequence
- ATGACATTAGGAAATAGTACTGAGGTATGTTGTAGAGTTTGTCTGCAACTTGAGGAGTTAATGATTCATATTTACGACGGTGGTGTTATTGAAGACTTTCAAACGGACCTAATCACTTTACTGGAACGCTGTGGAGGAATCAAGgtaGAAAAATCGGACAATCTTCCAAAATTTCTATGCAAGGAATGTACGACTGAATTACTGGTGGCTGCGAAATTTCGCGAGAAATGTGAACGGGCGCAACAATTACTAAAAGTTGTTTCATGGAAGAACACGAACGGAGATGTTCGGGAATGTTTACCAATAAAATCAGTAGAtgtaaaaaatgaagaacttttCACTGAAACTGAGGCTACATGTGATTCACAGTTTTTAAACGATCGTAatgatataattgaaattcatccAGATAGTTTTGtggaaacaaatttaaatgaacaaaatattgaaaatcaaaCCTCGACAAATACAGTGTTAGATAGTGCACTTATACCTGAAAGTGGGGAACtcattgatattaatttaaattgcattGATGTAATAGAAGAAACCAATGAAGAGTGGCAAGTAAtggaatattttgaaagcaataGCTGTGAAggagaacaaaaacaagaaatatattcacCCAATAACTATCTGACAAATGATGTCAAGTGCACAGAAAATGCTGCTTCACAAATAAATtccgaaaaaaaatacacatgcGATTCCTGCGGTGCAGTTTTCCTACAGGCAGCTAATCTTCAACGGCATTTGGAAAAAGTGCACTTCCTATTACAACCATATCACTGTGTCAATTGTAGTCACACTTTTTCATCGGAGCAAACTTATATAAATCATAGTATTAGTTGTATAAAATCCAATGATCATACTACTCTAGGGAATAACAATTCAAACAATAATACACTAAGTAAAACATTGCCAACGTCGTCTCAACGAGAATGTGTATACTGTGGCAAACAAATGCAGTCCAACTTCGCTCTCAACATGCACCTACGTACACATACCGGAGAACGTCCATACAAATGTGACCACTGTCCGAAAGCTTTCAAAACCCAATCAGCTTATACAATGCACTTGAAACGTCACGCTCGAAAGCCAGACTATTCATGTTCATTATGCCATAAGACTTTCTATGAGACCAGCAATTTGACGGTGCACATGCGCACGCACACCGGAGAAAAGCCACATTCTTGCACCTTTTGTCAAAAGCGGTTTGCACGTGTCTTCCTCTTACAATTGCATATGCGGACTCACACCGGTGAAAAACCATATCAATGCACAACTTGTAACCGTAGCTTCGCGCAATTATGTGATCTAAAGAATCACGAGCGCATACATACTGGcgaaaggaattataaatgtaCTATATGTGGAAagacatttataaaaaagtattcacTCAGGACGCATATGGATCGGCATGCCATTCTACAACCTGAAGAGGGAACTGTGTCCGatgaaaaaatttacgaaagAGTAAATGCCAAAAATACACAAGTGGAAGATGAGTCCGTCAAGTACATGCTTGACAATAGCATGTTGGAAGGTGATAGTTACTTTCTATCCAAAGCTCCTGAAGACAATTTTTGTAACCTATCTTATGAAGAGGTGCCCCAACTGAATGAATCCAATCCAGACCTTGTCTGGAGTGATTTTATAGTTGAGCATATATGA
- Protein Sequence
- MTLGNSTEVCCRVCLQLEELMIHIYDGGVIEDFQTDLITLLERCGGIKVEKSDNLPKFLCKECTTELLVAAKFREKCERAQQLLKVVSWKNTNGDVRECLPIKSVDVKNEELFTETEATCDSQFLNDRNDIIEIHPDSFVETNLNEQNIENQTSTNTVLDSALIPESGELIDINLNCIDVIEETNEEWQVMEYFESNSCEGEQKQEIYSPNNYLTNDVKCTENAASQINSEKKYTCDSCGAVFLQAANLQRHLEKVHFLLQPYHCVNCSHTFSSEQTYINHSISCIKSNDHTTLGNNNSNNNTLSKTLPTSSQRECVYCGKQMQSNFALNMHLRTHTGERPYKCDHCPKAFKTQSAYTMHLKRHARKPDYSCSLCHKTFYETSNLTVHMRTHTGEKPHSCTFCQKRFARVFLLQLHMRTHTGEKPYQCTTCNRSFAQLCDLKNHERIHTGERNYKCTICGKTFIKKYSLRTHMDRHAILQPEEGTVSDEKIYERVNAKNTQVEDESVKYMLDNSMLEGDSYFLSKAPEDNFCNLSYEEVPQLNESNPDLVWSDFIVEHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00192997; iTF_00193763; iTF_00192264; iTF_00191541; iTF_00190150; iTF_00190841;
- 90% Identity
- iTF_00192997;
- 80% Identity
- iTF_00192997;