Bole015902.1
Basic Information
- Insect
- Bactrocera oleae
- Gene Symbol
- -
- Assembly
- GCA_001188975.4
- Location
- LGAM02035380.1:13243291-13252364[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 9.4 8.1e+02 1.0 0.2 1 17 74 90 74 91 0.82 2 16 0.00024 0.021 15.5 1.3 1 23 147 169 147 169 0.98 3 16 4.2 3.6e+02 2.1 5.9 1 23 175 198 175 198 0.95 4 16 0.00024 0.021 15.5 1.5 2 23 440 461 439 461 0.97 5 16 3.8 3.3e+02 2.3 4.1 1 23 467 490 467 490 0.94 6 16 0.16 13 6.6 2.2 1 23 518 541 518 541 0.95 7 16 0.03 2.6 8.9 2.9 2 23 589 610 588 610 0.96 8 16 0.015 1.3 9.9 3.2 3 23 849 869 848 869 0.96 9 16 0.0063 0.55 11.0 0.7 1 23 875 898 875 898 0.96 10 16 0.021 1.8 9.4 0.3 1 23 971 994 971 994 0.96 11 16 2.1 1.8e+02 3.1 0.1 1 20 1174 1193 1174 1195 0.92 12 16 0.0012 0.11 13.2 9.0 1 23 1228 1250 1228 1250 0.99 13 16 0.00021 0.018 15.7 3.9 1 23 1255 1277 1255 1277 0.98 14 16 0.00014 0.012 16.2 5.7 1 23 1283 1306 1283 1306 0.95 15 16 0.00035 0.03 15.0 0.1 2 19 1312 1331 1312 1335 0.94 16 16 3.1e-05 0.0026 18.3 5.0 1 23 1341 1364 1341 1364 0.98
Sequence Information
- Coding Sequence
- ATGGACGCTGACACCGTGTTGGAAAGAACGGCGCCAAGCGATTACAGGCTCGTTTGTAGAACGTGCCTTGCTTCCGATGCCGAATTTTACAAACTCGATTCACCTATATTCTTAGAAGATGACGAAACGGACGAAAAGCCAGCCAGCTTTATGGAATGCCTGCGTTACTGTACACGTTTAGGCGATAACGATGACAGtgaaaaattggattttccaatttacatatgtactgaATGTAGTACATCCCTGCAAGTGTCCTACAATTTTATACGTAATGCACTTGAAGCGCATGAAATTTTACGTCAAAAATTGAGTGAAAATACTGATCTGCAATTGAAAAAACACAAAGTTCAACGTAAGAATGGTATTGTGGATGAAGATGGGCGCAAAAGCGCGGGGTTAGAAGACGGTGcgGAGTCGGAAGCGACAAAAATGCGCTTTCGGTGTAAAATATGCAACGAAAAAGTCGAAACAAAGAAAACATTGAAAGAACACATTAAATTGCATTTAGATATAATTTCTTATTGCTGTGAGCTGTGTAGTTTCGAATGCAAGAAACGAACTTTGCTATTTGATCATTATAAATTGGCGCATAACACGCAACCAACACGGGATCAgttaaaaccaaaaaccaaacaGCCTGTAAAAAAAGAACAAGAAATCGATAGCGAAGATCCAATTACACAAGAAATGGAGAAAATACACAATACACAAGTAAACGAAGATTATTCGAATCATACAAAATTCGCAGCACCGGACCAACAAGAAGAATTAGATATGAAGTTATTTCTAACACCAGCCAGCAGTAATGGATCAGCGGCAGCGGCATATGTAGAAGCGGCCGCAGCTGCAACCGCTGTTGATGTCCACGATGAATTGCCCGAGCATAGACCTAGCATAACGAAGGATTTGCAGCAGTACGGCACAGATCAATTCAATATAACCGCAAATGAATTAAGCGTGGGAAATGAATTTATCGTTATGGCGGATGGTACGGTAGAGGAAGTGATGGGCAACGGTGTTGTCATCGAATACATTAATGCTGCGGAGGATGGTGTCACATTGGAAAACGGGTTGGTCTTGGATAATATAATGCAAGTGCAACAAACAAGCGATGCTGAGCAGACGGTCACTATGGATATGGATGTTGATGATATTATAATAGAAGAAAGTGTTGGTAATGATTTATCTATCTCCAGCCTTGCGTCTATTTCGATGGGACCAGAGACCACAGTGCAAACACTACAAAATATTGAAGATGAATTGCCGCCACCCTcaataataactgtaaatagTTTAGTTACTGCAAAGCGTATTAAGTGTAAGATTTGCACCAGTAACTTTCAGACACAAGATCAACTTAAAACTCACATGCTATCGCATAATGAAATACCGCATTTCTTTTGCGATCAGTGTACGTTTTATACATTCTTTAAGATTGATTTAACACAACATTACAAAACCAAACACAAGCTGCAGCCGACACAAAAACAACTGCAACCGAAAAATAAAGTGCGAACCAATGACAAATTTAGCGATCTTAAACATATATACGCGTGCGATTTGTGTCTTTTCGAAACACGTATAAAGTCGCACTTACGCCGCCATTATTTGAGTCAGCATCAAGAAGAGGCGACCGAAGTGCAATTACGACCGACAATCGATGAATCAGCTGCTTTAACAGCACCGGATATGACACCGCCAGAAACACTACCAAAACAGCGTGGTGGTAAAGCGTTGCGCCCAGATTATCCCAAAggtttaaattgcaaaaaatgttcaaaaacattttattggcGTGAGAAACTCAAAGATCACTATAGGCAACACGGTTTGGAAGAGGGCAATGGCATTGGAGCAGCTACAACCGATTCAATACAGATGTCTGCGCCGGGTACAAGTTTACTAAAACACAATACATTTCAATACCACTTGCCTCAAcatgataataataatgtaaacaCCATAATCGATGCAACAAATATCGGTCACAACAACAGTTATAACAGCACTGTTGATGCCAATGTAATTGATGCACAAGCAATTGTCGACGCAGCTGTGGCGGAAGCTCAAGCCGCTTCTATGCAAATGAACTTGCAAATGAATCAGCCAGCACCGGACATTATAATGGATATACCAGTAGCGACGACCACAATTTCCACCACCACCACGATGCCGTTAGATTCAACGGTTAATGCAAGCGATGTAAATAGCATGCAACAGCAAGCTGTAACAGTGATGTCCGGCTATGCTTGTCCACAAATACCATCGGATGCTATACCGCAAGTGGTTGAAACGGATACAACCATAGATAATAGCGAattagattttgtttttaacGATGCACTTTTCGAAGATTTCGAAGAAGACGAAAATGAGGATGAAGAGAATGAAGAGGATGATGGCACGGACTTTCAAGATTTGCTGCTAACAAGTGATGACGACTTTGACGATATGTTACAGgatcagcagcagcaacagcatgaTGCTGGCGGGGAGGCTGGTAGTGCCGCAGCGGTGAACAGCAGCAATTATCAACCATATTGTGTGCActgcaataaaaagtttttaagtcAATATCAATTTGAAAATCACATGTTCGTGCATCGTGGTTTAGCTCCATACCGCTGTGAAATGTGCACTAATTTGTATAATACGAAGCGTGCACTGATTCGCCACTATCGCGCGGTGCATAAACGAATTCCAACGAGGGATATGATTCAAGCTAAGGGAGACAAAgtTGTAGTGGATCACACGCCGATTGAACATTTAAATCTGATTGAACAAAAAGcGGTGACTTTAATGTGTGCAAAATGTCCTTACGAATCGGTTGAATTGCAAGTAATGCAAATGCATTTGAACACCATACATGGCCTTGTTGATGaGAACTACATACTACAAAAATTACCGTTTGAGTGTCCACGCTGCATCCGTTCATACGCGACGAGAGCGCGTCTGATACGTCATTTGGAGCGCAGTCATTCGGTGGCGACTATAATACAACAGCAACGCAACACAAGCAATAATGCATTGCGAaatcaattacaacaacaacaagcacaccaatcatatataacaataaaagacacgtctaaaacaacaacagctgcagccATATCCACATCCGCTATagcagtgacaacaacaacgacaaattCAAGTTGCGGCCGAGGCATAAGAACGCATTCATATcaatacaactacaacaacaacagcgctgaTGACGTTGATGTCCACGATAAAGATGTTGGTATTGGTGTTGGCGTTCGTGGTGGTGGTGATGACATtgaagacaacaacaataacaacaacaacaacaataataataataatgatgcaAGCACAACGGGTAAATCTAAATCTACAACTAACAGAGCTACGAAGaaatccacaacaacaacaacaactacaacaaatgcAACTGTCAGCGCCAGAAACACGATCAATGCAGTTGACAAAATAATTGGGTATGATAGTATATATCATGAATTGCACGATAACAACGAACTTTTTGATGAATATGCCTGTGGCATGTGTTCGCAAAGTTGGCGCACTGCAGCCGAGTTGCATGCACACGAATGCATACGTGCGGTGGACACCAGCAACAATGCAACCACCGTGGCCATATGCACGGCCAACACGTCTTTGGGCCTAATCAATTCGGAACGTTCACTCTATCTCTTCAAATGTGATATATGCCATTGCAATTACAAGTCCAGTGAATTACTTAAACATCACATGAAACGTCATACGGCGCGCAAATTTCGTTGCAATCACTGTCCGAAAACCTATATCAATCGTAGCGAATTGAAATTCCACCAACTCACCCATACGGGCGAGAAGCCGCACAAGTGTGAGATGTGCCCGAAACAGTTTCGTTATCCGCATCATTTGAAACGTCATTACGATGTTATACATCTGGGCAAGCGTGCACGCTGTCCCGTGGAGGGTTGCGGTCGTACATTTACGACGCAAGCGCAATTGAAGATACACTCGTGGATACATGACGGCAATGAACCGTATCGCTGCAAGTACTGTAGGGAAACGTTCAAGAAACGCGAGTATTTACGAAAACACACGCGCCGCATACACAAATGCGATCTAACTGAGGAGGAAATCGCTGAAATTTATCGCCAAAGTGTTGGACATACCAATCCGCATGACTTCACGGTGTCACTCTCCAATGGACGCATGCTGCGGCGTTCGGACGTCGAATTGGCCGCCCAGCATCCACACGAATACGCAAACGATTTAGCAGCAGAAACGGCAGTGGCCACTGCAATAGCAGAGGTAGCTGCCGTTAGTAGCGTTCAAACGGAAATCGATGCATCCAACGGACTCTCACCGCTATTAGCATCGAATACACATAATAACATGAATATGAAATTCGGCATGGGCGTCGAAGAGGAGGATGAGCATGCTGCTGTCTCCGTATCGCATGTTTCGCAGCGTAACACCTCTTTGTCCACGCACGAGGAAAGCATACACACCTACATCTTACCCGGCATGGAAGAGCACGGCCAGTTGCCACATTTCAAACTCGAAAATTCTGGCGCATTTTGA
- Protein Sequence
- MDADTVLERTAPSDYRLVCRTCLASDAEFYKLDSPIFLEDDETDEKPASFMECLRYCTRLGDNDDSEKLDFPIYICTECSTSLQVSYNFIRNALEAHEILRQKLSENTDLQLKKHKVQRKNGIVDEDGRKSAGLEDGAESEATKMRFRCKICNEKVETKKTLKEHIKLHLDIISYCCELCSFECKKRTLLFDHYKLAHNTQPTRDQLKPKTKQPVKKEQEIDSEDPITQEMEKIHNTQVNEDYSNHTKFAAPDQQEELDMKLFLTPASSNGSAAAAYVEAAAAATAVDVHDELPEHRPSITKDLQQYGTDQFNITANELSVGNEFIVMADGTVEEVMGNGVVIEYINAAEDGVTLENGLVLDNIMQVQQTSDAEQTVTMDMDVDDIIIEESVGNDLSISSLASISMGPETTVQTLQNIEDELPPPSIITVNSLVTAKRIKCKICTSNFQTQDQLKTHMLSHNEIPHFFCDQCTFYTFFKIDLTQHYKTKHKLQPTQKQLQPKNKVRTNDKFSDLKHIYACDLCLFETRIKSHLRRHYLSQHQEEATEVQLRPTIDESAALTAPDMTPPETLPKQRGGKALRPDYPKGLNCKKCSKTFYWREKLKDHYRQHGLEEGNGIGAATTDSIQMSAPGTSLLKHNTFQYHLPQHDNNNVNTIIDATNIGHNNSYNSTVDANVIDAQAIVDAAVAEAQAASMQMNLQMNQPAPDIIMDIPVATTTISTTTTMPLDSTVNASDVNSMQQQAVTVMSGYACPQIPSDAIPQVVETDTTIDNSELDFVFNDALFEDFEEDENEDEENEEDDGTDFQDLLLTSDDDFDDMLQDQQQQQHDAGGEAGSAAAVNSSNYQPYCVHCNKKFLSQYQFENHMFVHRGLAPYRCEMCTNLYNTKRALIRHYRAVHKRIPTRDMIQAKGDKVVVDHTPIEHLNLIEQKAVTLMCAKCPYESVELQVMQMHLNTIHGLVDENYILQKLPFECPRCIRSYATRARLIRHLERSHSVATIIQQQRNTSNNALRNQLQQQQAHQSYITIKDTSKTTTAAAISTSAIAVTTTTTNSSCGRGIRTHSYQYNYNNNSADDVDVHDKDVGIGVGVRGGGDDIEDNNNNNNNNNNNNNDASTTGKSKSTTNRATKKSTTTTTTTTNATVSARNTINAVDKIIGYDSIYHELHDNNELFDEYACGMCSQSWRTAAELHAHECIRAVDTSNNATTVAICTANTSLGLINSERSLYLFKCDICHCNYKSSELLKHHMKRHTARKFRCNHCPKTYINRSELKFHQLTHTGEKPHKCEMCPKQFRYPHHLKRHYDVIHLGKRARCPVEGCGRTFTTQAQLKIHSWIHDGNEPYRCKYCRETFKKREYLRKHTRRIHKCDLTEEEIAEIYRQSVGHTNPHDFTVSLSNGRMLRRSDVELAAQHPHEYANDLAAETAVATAIAEVAAVSSVQTEIDASNGLSPLLASNTHNNMNMKFGMGVEEEDEHAAVSVSHVSQRNTSLSTHEESIHTYILPGMEEHGQLPHFKLENSGAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01564067; iTF_01563207; iTF_00190203; iTF_00191596; iTF_00190901;
- 90% Identity
- -
- 80% Identity
- -