Basic Information

Insect: Bactrocera oleae
Gene Symbol: -
Assembly: GCA_001188975.4
Location: LGAM02014340.1:606176-608786[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.089 7.7 7.4 3.2 1 23 181 204 181 204 0.90

2 14 0.06 5.2 7.9 0.0 3 23 210 231 208 231 0.90

3 14 0.2 17 6.3 0.5 1 23 237 259 237 259 0.96

4 14 0.039 3.4 8.5 0.2 3 23 285 305 283 305 0.97

5 14 0.0037 0.32 11.8 1.5 1 23 307 330 307 330 0.96

6 14 0.0013 0.11 13.2 0.8 1 23 352 375 352 375 0.98

7 14 0.0024 0.21 12.3 4.3 1 23 391 414 391 414 0.97

8 14 0.24 20 6.1 0.4 2 23 476 498 475 498 0.93

9 14 0.0062 0.53 11.0 0.2 2 23 507 528 506 528 0.94

10 14 0.0028 0.24 12.1 0.8 1 23 534 556 534 556 0.97

11 14 1e-07 8.8e-06 26.1 0.5 1 23 561 583 561 583 0.97

12 14 0.0022 0.19 12.5 3.2 1 23 589 611 589 611 0.98

13 14 0.00094 0.081 13.6 3.1 2 23 617 638 617 638 0.95

14 14 0.0077 0.67 10.7 1.9 1 23 643 666 643 666 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.089	7.7	7.4	3.2	1	23	181	204	181	204	0.90
2	14	0.06	5.2	7.9	0.0	3	23	210	231	208	231	0.90
3	14	0.2	17	6.3	0.5	1	23	237	259	237	259	0.96
4	14	0.039	3.4	8.5	0.2	3	23	285	305	283	305	0.97
5	14	0.0037	0.32	11.8	1.5	1	23	307	330	307	330	0.96
6	14	0.0013	0.11	13.2	0.8	1	23	352	375	352	375	0.98
7	14	0.0024	0.21	12.3	4.3	1	23	391	414	391	414	0.97
8	14	0.24	20	6.1	0.4	2	23	476	498	475	498	0.93
9	14	0.0062	0.53	11.0	0.2	2	23	507	528	506	528	0.94
10	14	0.0028	0.24	12.1	0.8	1	23	534	556	534	556	0.97
11	14	1e-07	8.8e-06	26.1	0.5	1	23	561	583	561	583	0.97
12	14	0.0022	0.19	12.5	3.2	1	23	589	611	589	611	0.98
13	14	0.00094	0.081	13.6	3.1	2	23	617	638	617	638	0.95
14	14	0.0077	0.67	10.7	1.9	1	23	643	666	643	666	0.97

Sequence Information

Coding Sequence: atgcactgcCGTGCTTGTATGCAAGTGGATTGTGAAACGGTTGTGGATATGAATTATGCCGCAATTGCGGAGGATGGTAAAACTTTATACGATTACTTTAATGAGTGCACTCAACTACAAGCAACAGTGAATGATGAACTTCCACAAATATTATGTACAACTTGCACAGAAGACTTACATGATGcctataattttataaagagGGCTCGTAAGTCCGATGAAGAACTTAAAAAGAGTTTGACAACACAAAAAGATGGCGTAGGCATTTATACTACAACCCAAACTACACAGTATATAGTGGAATGCACAAATGATCCTTTAGCGACACCAGAACGACAAATTGTCGCAACTGAAACTTTCAACACTGCTGGCGGTGCTGAAGTGGCTATATCTGCGTCAGAAATAAAGGTGGAACTTGAGCTTTCAGAAGATTTTGAAAGAATAATGGAGGATCATGTTGTGAAAAGTGATTCCGAACCTTCACTGCACGGCGGGGACAGCGATGATGACAGCGGTGACGTTATCAAGCCAGGCATATCACATTCTTGTGAAATATGCGATTGCACATATTTATCGCAAAAGCAACTGAAAGATCATATATTCGATCTGCACAAATCTCACATCATTTGCATGAAATGTCCAAAAGTATACGAGCTTCCCACCGAACTACAACTTCATGAATCTCTTGTACATAGCACAGAATCGCCATTTCAATGCACATGGTGTAGTGAATCCTTACAACGTGAAGATCTACCTAAACATATTCAGAAGAAGCATAAAAAttcttatagaaaatattttccgcGTACGAGAAGACGTTGTAATGATAATGATGAGAAGAATACTTTTGGATGTGACGATTGCCAACTGCAATTTTCATCCATACTGGAGTTATCCTATCACATAAAGGAACACAAATTTGACTGTCCATTATGTTTGATGAGTTTTAGAAAACATGGTACGTATCGGGCGCATGTTAAACGCATACATAATCATTCCATAAGTAGCTTAAAAGCTGCGGTTGGTGTTGAGGATGACGATGCGAATAAGCCATACAAGTGTTCCTTATGCGCCAGGCAGTTCAGATTGAAAGCGTCTCTTCAAGGACATTTGAAAGTGAAACATAACCAATATACCCGGCAAAATGCCAAACACGACGACGATAAGTTATTTGAATGCGCGTTTTGCAATATGCGTTTTGCAAGCCAAAATTCGCTTTATCACCACAAAAGACGCAAACACCAAGATTTGTTAGCAACGCCTGTTGCAGATAGTGAAATCAGTACTACGGTGGTGGAAATGGAAAATGAAACAGAAAACAATGGATTTGTTAATTGCACATTTTGTCATAAGGACATACCAACAAGTGAAATTAAGTATCACGACAGACGGCACAAGTATGcgttgaataaaaaaagaaaatttctgtGTGCATTCTGCcCGCGTGAATATAATTCGGAAACGTCTGTTAAATTGCATGAGAAAAAGGTTCATATGTGCGAGAAACCCGAACCCAAGGAATGTCCTATATGTCAGAAAAAAGTTGAtccgaaatatttgaaaaaccaCATCGAGAACGTGCACACGTCCGAGCGTAAATTTATCTGTGATATTTGCGGCGATCCCTTCAAGAGTTACGTTTTACTGCATAGTCATAAACGTTTGCACTTGGAACGTAATTTCGCATGCACTGTGTGCGAAAAAAAGTTTATACGCTCATCTGATTTGAAAGTCCATATGCGCATACACACAGGCGAAGAGCCATACGCTTGTCATTTGTGTGATCGTAGGTTTAAAATCAAAGTGCGCCTTAATTATCACCTGCAGCGTCATGCTGGCATAAAGCGGAAATGCCAGGAGTGCGGAAAAGAATTCAATCATGTTAAACAGTTGAAAATCCATTCATATAAACACACTGGCATGCCATATAGATGTTCCGTTTGTGAATACGGCTGTGCGCAGCGTGATGTTTTTCGAAAGCATTTATTGCGTATGCACGATATGACTATGACTGATGAGGAGTATTGTGCAATGTTCAAAGCGAATACTGGCCGAAATCCGCATGTGAAAACTCTGGAAGAATTGCAGTCGGAGGCGCAAAATATAGAGCAAGAGCAGTCAAACTAA
Protein Sequence: MHCRACMQVDCETVVDMNYAAIAEDGKTLYDYFNECTQLQATVNDELPQILCTTCTEDLHDAYNFIKRARKSDEELKKSLTTQKDGVGIYTTTQTTQYIVECTNDPLATPERQIVATETFNTAGGAEVAISASEIKVELELSEDFERIMEDHVVKSDSEPSLHGGDSDDDSGDVIKPGISHSCEICDCTYLSQKQLKDHIFDLHKSHIICMKCPKVYELPTELQLHESLVHSTESPFQCTWCSESLQREDLPKHIQKKHKNSYRKYFPRTRRRCNDNDEKNTFGCDDCQLQFSSILELSYHIKEHKFDCPLCLMSFRKHGTYRAHVKRIHNHSISSLKAAVGVEDDDANKPYKCSLCARQFRLKASLQGHLKVKHNQYTRQNAKHDDDKLFECAFCNMRFASQNSLYHHKRRKHQDLLATPVADSEISTTVVEMENETENNGFVNCTFCHKDIPTSEIKYHDRRHKYALNKKRKFLCAFCPREYNSETSVKLHEKKVHMCEKPEPKECPICQKKVDPKYLKNHIENVHTSERKFICDICGDPFKSYVLLHSHKRLHLERNFACTVCEKKFIRSSDLKVHMRIHTGEEPYACHLCDRRFKIKVRLNYHLQRHAGIKRKCQECGKEFNHVKQLKIHSYKHTGMPYRCSVCEYGCAQRDVFRKHLLRMHDMTMTDEEYCAMFKANTGRNPHVKTLEELQSEAQNIEQEQSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192297; iTF_00190877; iTF_00190184; iTF_01563165; iTF_01564037;
90% Identity: -
80% Identity: -