Basic Information

Insect: Bactrocera oleae
Gene Symbol: bab2
Assembly: GCA_001188975.4
Location: LGAM02016867.1:7081830-7083422[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.3e-15 5.4e-12 45.4 0.0 2 44 339 381 338 382 0.95

2 3 0.0027 6.1 6.8 0.0 23 37 407 421 397 427 0.83

3 3 5.7e-18 1.3e-14 53.8 0.0 3 41 449 487 447 489 0.92

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.3e-15	5.4e-12	45.4	2	44	339	381	338	382	0.95
2	3	0.0027	6.1	6.8	23	37	407	421	397	427	0.83
3	3	5.7e-18	1.3e-14	53.8	3	41	449	487	447	489	0.92

Sequence Information

Coding Sequence: ATGAATCATTTGAAATGGATGGGCCATTCGGCAACAATATTTGATATACAAAGAAATCTTCGCAATGATCCTCAAAGCTGTGAGGTGACACTGGTAGCCAAAGGTCATTCAGTGCGTGCCCATCGGTTTGTCTTATCATCATGTTCAGACTTGCTGCGCAATCTGCTGGTGGATGTTCCAATGGGGCAGGAAGCAACAATTGTAGTGCCGGATATAAAAGGGTCTCTGCTCGACAGTGTATTAGCTTTTATATACATTGGCGAAACAAGCCTCACATCGACTAATTTATCAGAGTTCTTGGAAGCTATAAATACCTTGGGTATCAAGTCAGCTATAAGTTTTGAGTGCAACAATGCAACGTTATCAGGTGGTGTCCAGACAACAGAAGCAGTTAAGACTATAAGCAATATACAAATTGCACAAGAAGAGCTTATTgaacaacaagaaaatattgCTGTCGAGAAGATCGAGACACAAAACGTAATACAACATGAAAGAGAACTGGAATTTTTGGATGTATATAACGAAGCTCAACATAGTAAAATTACTTACTCCATTGAACATATGCCAGTTGCCAGCGCAGCAAACGAATACATATTAACTGAAAATTCTGGAACCTTTACATTAACCCAAAATAATAAACTAGAAAATGGCTCCAATTCTGATACGGAAAAACTTGTTGAAATGGAGGATACCACGGAAGATGGTCACATCATAGAGGAATATAGCAGTAACAGCGCAGATCCTATAATTGAAATTACCACAAATACTACAGCGACAAGTACACCAAAAGTGACTGCCACAACAACAGCTACTACGCAAGTGCCACAACCGCTAATTCAAATAAAACCAACGCCAAAAATGAAAACTATCAAAATTAAATCACAATCATCTTCAGACACCGATCAAATACATCAATCAATGTTTACCACGCTTGACCCCACCGCAGATCCTATTTCAGTATTAAAGACTGATGATAATTTTACCACATTAAACGCCGCACCCGGTACTCAAGAAGATGCTCTTTTTTATGCCGTTCAGGCAGTAATAAATGAAGGTATGAGCTTACAGAAAGCTGCACTAAAATATGATTTATCGAAAACGGTACTTTGGCGGAGAGTGCGCAAGCACccaaattatatgaaaactaCCCGTGAAAATCCTGTTCTCACCATGGCCTACGAACGATTAAAAGGTGGCGACTCTTTGAAGAATATCAGTCGCGAATTAGATATACCAATGTCTACACTACATAGACATAAGGTACGTTTAGCACAGCAAGGACGTTTGCCAGACTATGTTTCTTTTAAGAAACGTGATGTTAACTCGAAAATTGAACTTAAAGACAAATTAACTAAAGCGTTGCACGCTTGTGTACATGAGGGAATGTCGCAAAATCATGCAGCAAATTTATTTGACATACCGAAAAGCACTCTATGGCGTCACCTTCAAAAGCGTGTTGCTGAAGCAGAACTTTCCCAGAAACTTGAACTAGGCCACATCAAGGAGGAAGTAATATTATCTTAA
Protein Sequence: MNHLKWMGHSATIFDIQRNLRNDPQSCEVTLVAKGHSVRAHRFVLSSCSDLLRNLLVDVPMGQEATIVVPDIKGSLLDSVLAFIYIGETSLTSTNLSEFLEAINTLGIKSAISFECNNATLSGGVQTTEAVKTISNIQIAQEELIEQQENIAVEKIETQNVIQHERELEFLDVYNEAQHSKITYSIEHMPVASAANEYILTENSGTFTLTQNNKLENGSNSDTEKLVEMEDTTEDGHIIEEYSSNSADPIIEITTNTTATSTPKVTATTTATTQVPQPLIQIKPTPKMKTIKIKSQSSSDTDQIHQSMFTTLDPTADPISVLKTDDNFTTLNAAPGTQEDALFYAVQAVINEGMSLQKAALKYDLSKTVLWRRVRKHPNYMKTTRENPVLTMAYERLKGGDSLKNISRELDIPMSTLHRHKVRLAQQGRLPDYVSFKKRDVNSKIELKDKLTKALHACVHEGMSQNHAANLFDIPKSTLWRHLQKRVAEAELSQKLELGHIKEEVILS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357850;
90% Identity: iTF_00303738;
80% Identity: iTF_00192929;