Basic Information

Gene Symbol
Arid2
Assembly
GCA_001188975.4
Location
LGAM02038715.1:5148602-5154682[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-25 1.4e-21 76.9 0.0 2 89 81 166 80 166 0.95

Sequence Information

Coding Sequence
ATGTCTCTACAAGAACCTTTGAAAGGCTCAGTGCCTGTAGGAAATGACGCCAACAACACACCGGCAACAATTGCATATTCAATCCCAAGTGCATCTTCCGCTAATAATGGAACACCTTTacgcataaaaagttttcatataatgGGTACACCAGTAACAAATATTGATACAGCTGCGTCAGTAAATTCAACTAATACACCTAATAACATACTTCCCAAGGGAAAAACTTTACCAAAACCTCCAGACGAATTTTATCGTGACCTGCAACAATTTCATGAGAGGCGTGCtaCACCAATTATGTACACGCCGAAAATTAGCGGGCGAGAGATAGATCTCCATCGACTTTACAGCGAAGTAACAGAACGCGGTGGTTTCAACAAGGTGAATCAAAGAGATGAATGGGACGAAGTCTTGCCAGTATTAGACATTCGTGATAAATGTGTAAATGCTACTGCCGcagtaaagtatatatacagacgcTGTCTGGAAAAATATGAGAGACAGAATTTTTTCGGCGAAGATCCAGATAAAATAGAAGCACTAGAATCTGCAGATGCGATGGAAGGTGGTGGTCGTTCACGAAGTCGTTATCCTGCGTCAATTTATTCAAGCAATAGCGTTAATACCAACGTCAATGCAGTCCCAATGGCCTACAATTACAGACAACATATTGTTAATATGGATAGACGTCGTACCTATAAATTCTCTACCGATCTTCACAAACCGTCACCTTATGATAAGCTTATGCTTTCTCTAATTTCACCGCTTCCTAATGAGCAAGATTTTGCAATAAATGTTTGCTCATTAATGTCAAATGAAAATAAGCACACACTAAAGCTGAATGAATATCCAAAACTTTTGGATGTGCTGCTGGCTCATACGGGAGTATTTCCAGATTACACTTTGCGCAAATTGTTTCAACATGTTTACACACAAGTACGCGAAcattcactttttaatttttggcgcGACTTATTACGTGACAAACCACAGATATTAGATTTATATTCAGATGAACAAGCTATGCGTGATGCCGGACTAATAAATGAAGATGATACtgaaaaagtaatcaaaaagTTTGACGATGATATGGACTGGGATTTCTTAAATTTGGGACCCGGTGAAGGCACACAGGAGTATGTCGGTCAACGGGTACAGCAAATTGTGGCTATATTTCGAAATCTTAGCTTTTTTGAGGAAAACATCAATGTATTTGCAAAAAATCGATCATTTATGCGTTTCATAGTGATGGGTGCCAATATACGCTGGGGTAATCTACATAATCAGATATTGGATATAGCCGGTAATATTGCTACTGAAATAGAACTGTTAGATCCATCAACCGATGACGTCTCGCGCAGTTTATTGGCAACACTCTGTGATGGTATTGAAAGTATGGATCGCGGTGTAATCATAAACAGTTTGGAGACACTTTACAAGCTCTGTCAAACCGATGGCAATGAGGAGCATATTAACAAGTTTTTAAATCTTAAGTTTTATGAAAGCATATGCCAATTTCTCTGTCTAAATGATATCATGCTGCTTATATTTACACTTGAAACGATTTACGCGCTAACTTCATTGGGGACACGGTCATGCCATCTTATAATGCAGGTACGAGGTATTGTAGACCAGTTAGTGTCTCTAGTCACTGTCGAAGCACAATCATACGGGCCAGATGGCTGTATTTTGATGCGAGTTGTAGAAACAGTGCCTGGTAATATGCTGCCAATGGTTGCACAAAACATCGCAAATCTACAAAATGTCGCAGTTTTACAGAAACCCCCTCCAAATGTGCTTGTGCCAACATCTCAATTGCCAGCACCGCAAGCACCCGTACCTATGCAAGTGATGTCAACACAAATTACACCTTCACATCCGCAATTGACTACTGTAAGAGTGCCACAAGTTGTAACTGATTTCTCCCAAAATCAACAACCCATGTTGGTGGATCAGACAACTACGATGCAAACAGCAACGACTGTACAGCAACCAGAAGCAACGACAGTACAGCAGAACGTAACGAATGGAGCGCAATTACCTACTGGTCCgacacaaaattttacacacgagGACGAACAATATGCTTTGGCTTGGCTAGGCGCTACTTTTGAGCGAGTAACAACAACAGATAGTCACGTGGAACAACAAGAACTCTATCGCATGTACTTAGCACACTGCCAGAAGTTCGGTAAACACTCGGTTGTTAATCATTTACAATTTCCACGTCTTGTACGCTTGATATATACGAACAATGTTGGTCCCATGTCGGCGCGTCGAAGTGATGGTACTGAGTTGTCAGGTTTCTACTACGTTGGTATACGATTGCGTGCACAGCCATTACCCATACAATCCACCAAGCTACCTCAAAATCAGACAAAACTTTTGGAAAGTAAGCTACCACCAAAAGCGAATACAGTTGAATCACCAGCCGCTGGTACAACGCCTGCAcgtaaactgaaaaaaaaacccaaattgcAGCATGAACCCGACATTACATCTGCGGATATCACGACTCCTACACTCACTTCGACTAGTATGACCGCATCAACTATCCAAGAGCTATCTGACGCccaaacaaaaattgttgaagaaaCTACCACATCTGCTGCATCGTCTATAACTACCTCTACCAGCTCGTCTCACTGTGACGCAGCTTTGTTGGTAGTGGCGACACCACACTGTGCGACATCACCATCGTTGTCTTTACAAAACGCCACAGATACAGCAGTGCAACCATCCTCTTCactaattaaaagtttattggCCAACAAGGTGACACAACGTCAACAAAAAAATCAGAAGGAAATAAATACTGCCGCCAACAGTAGCCAGTCGTCGGCAAGTACTTCAACAAATGCTTCAGCGAACGCGCTTACACAACAACCAATAAAAGTTGCCAGTACGGCTTTAAGTGCTTTGGTGAATAATCCCCTTATGCAGAATACACCCGTGAAAGTGGGGCAGACTACCATTAAGCCGCTGAATCCACAAGTGCCCTTGGAAAAAAAGCCATTGCTTGAATCAACACCTCCACCATTGGCACCACTTAGTGGCAATAACGTGGCCAAGGATGCAAGTGGACGTCCAGTAATTATTGCCAATCAAATGCTAGTAGAAATACTCGATAAAAAGGGTGGAGAACCACCAACGCCCAGCACAATTATTAAACGTAAAATCGAGGAATGTACGGAACCCGCAAAACGACAAGCTTTGGAACCAATAAACGCCAAAGAGGATCCCCAAGTAACACCGTCAAAGAATGCCGCAAATTTATACGCAGAAATGGCTGCATCTATATTAGAAGACGAGGATTTAGAAGACATACCACCACTACCAGCTGTAATTACTACTTCATCAACATCTACTATCTCAACGCAATCAAAATTGAATGAATCTATTCAACAGCAACAGTTGTTAATTCCAGCAAAAATTCAACAGGCTACCCTACCAGGTGTTCAGCGTCAGCTAGTATTTCAATCAAATCAACCGCCACAGTTAAAGCTGACCGCACATAGTGGTGTTGCGCCATCTAATCAGCTGCCAACAGCCATGGCTACCATAAAAACAGATCAAGGATTACAGACTGTACCAGTTATTCTACAACAAAAGTCACTAGAACAGGCACAACCTCAACAGTTGATACAGCAAGTAATCACACAAAATATACCGCAAGCAGCGCCACAGCAACAACCAACACAATATGTGCTTGCCACAAATCAACAAGGTCAAACATATCTAGTAGCACAACAACCGCAGCCACAACCACCACCGCCACAACAAACGGTGTTAGTTACTCAAACACCACAGCAACAATCAGCCggtacaaaaacaattattatactTCAGCAGCAAACGATGGCCGGTCAGCAAACGCATCCTTCGCAACCGCAGCTCATAACAGGTGGTTCACAAAAGATGATCATGAGAACGCCACAGGGCCAAGTGTTGGTAGCACAGCGCCCACAACCGTCGCTGCCCGCATCAACAACACAGCAGTATTTCATAAATCCGCAAACCGGTACTGCCACACATATTCATGTTCCAGTTAGCGGTAGTGCCATTACTGCTAATGTTTCGAGTGTGTCGAGCAGTAATCAGTTTTTGCAACGAAATCAAATATTGTCAACATCACAAGTAACCACTATCGCTCCTACGCAAACGAGCTCTGGACAAATTTCACCATCATTACTTTCACAGCTAAACCACATTCCAGCTACGATAAAACTACATCAACCCCAGATGCCGACAACAACAGTGTCCTCTGTAAATCAACATCAGCCAGCAACCATTTCACGTATAGGGAAGGCAGTTTCTATTGTGCAGTCTACACCAGGCTTGACAGTGTCACCATCGCCCATACAAATACCGCAATTGCAGCAGCATCAATCTATTATACAACAACACATAATATCGGGACCATCCGAGAAACGGCAAATGATACTTGGTGGACGAGCTATTGAAATTAAGGAGACGGTAATTACGCAAACACCACCACCTGCGCAACAGAGCCAATTGAACTCTCAAACGATTATAACAAAACAAGtgttgccacaacaacaacaacaacagcagcaacagcaacagacGCCACAACAAACCCAACAAATACGCACAGTTattgaacaacaacagcatccaTCAATTATTCAACAGAAGTTGTGTTTGCAACAACAGACACAAAAGtcTGGTGAACAAATCAATATAATGCAATCATCTTTGCCAACCAAATCTCCGACCGCAGCTCAGAGCGTCGCCCAACAATCAGCATCACAGTCGCCGCAACCATCCAGTAATGCAATTGTTGTGCAACAAATCAAAGCACATACACAACAGCAATCTGCAATACCAGTTGTTAACAATAAAATGGTTGCTACTGAGCCACCACCTCTAACGCAGACTGCACGCACAAGCAACATTAGTCAACCGCAACCAAAAGAAGTATCCAAACTCaatgaaatatcaaatatttctgGTAATGCAGCAACCACAGTGGCAACAGTCGCAACAACAGCACAAGCTGTCTCAACATCAAGTACACCACCACCAGCAAGCACTGTTCAAACGCCATTGGTGAAACCCATACTTCCGATGCCCCAACTGCCGCAAGTGCAGTTACCACCTGGTGTGGCAGCGGCCGCGGCAGCCAATGCAACACCACCTTTAGATCCCAACTGGTTATATGTTTGTGATTGGCGCAACTGTCCGCGTCGTAAATACAAATCTCTTAATGATTTGCAGCATCATGCGTTTACGGTGCATTGCCCGGATCATCTGGATCCGGCTGCGGAAATTTTCTGCCAGTGGGGCGTTGGTCCAGGTCTTTGCGATGGCATACCACGCAAACGTTATTCACTTATGACACACATAATAGATCGTCACTTGACGACCGATAGTTTACATGCCGCTGCGCAACGACGAGTAGCAACAGGCACAGTCAATTTGCAGCCAACGCAAGCACCGGTAACTATAGTACGCAATGTTGAGGCGGCACAAGCGCAGGCGCAACGTAACAATACCGCCTCGCCAGCGCCATCGACATCATCGTCCTCATCTGGTTCACAACTGTATGGAATCGGCGTCGCCACTAGTTCAGCTATGAACGCTATCAAGCGGCACACAGCCGACTACGTCAAAGAGGTAATGGATGAAAATGAAGGTCCGGTAACGAAAAGCATACGGTTAACCGCCGCATTGATATTAAGAAATTTGGTTACCTATACCAGCACAGCAAAACGCAATTTACGGCGTTATGAACCGCATCTATCCAATATAGCATTGAGTAATGTGGAGTCAAGTGGTGCGATTTCACACATTCTTTTCGAGTTGAATAATTAA
Protein Sequence
MSLQEPLKGSVPVGNDANNTPATIAYSIPSASSANNGTPLRIKSFHIMGTPVTNIDTAASVNSTNTPNNILPKGKTLPKPPDEFYRDLQQFHERRATPIMYTPKISGREIDLHRLYSEVTERGGFNKVNQRDEWDEVLPVLDIRDKCVNATAAVKYIYRRCLEKYERQNFFGEDPDKIEALESADAMEGGGRSRSRYPASIYSSNSVNTNVNAVPMAYNYRQHIVNMDRRRTYKFSTDLHKPSPYDKLMLSLISPLPNEQDFAINVCSLMSNENKHTLKLNEYPKLLDVLLAHTGVFPDYTLRKLFQHVYTQVREHSLFNFWRDLLRDKPQILDLYSDEQAMRDAGLINEDDTEKVIKKFDDDMDWDFLNLGPGEGTQEYVGQRVQQIVAIFRNLSFFEENINVFAKNRSFMRFIVMGANIRWGNLHNQILDIAGNIATEIELLDPSTDDVSRSLLATLCDGIESMDRGVIINSLETLYKLCQTDGNEEHINKFLNLKFYESICQFLCLNDIMLLIFTLETIYALTSLGTRSCHLIMQVRGIVDQLVSLVTVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIANLQNVAVLQKPPPNVLVPTSQLPAPQAPVPMQVMSTQITPSHPQLTTVRVPQVVTDFSQNQQPMLVDQTTTMQTATTVQQPEATTVQQNVTNGAQLPTGPTQNFTHEDEQYALAWLGATFERVTTTDSHVEQQELYRMYLAHCQKFGKHSVVNHLQFPRLVRLIYTNNVGPMSARRSDGTELSGFYYVGIRLRAQPLPIQSTKLPQNQTKLLESKLPPKANTVESPAAGTTPARKLKKKPKLQHEPDITSADITTPTLTSTSMTASTIQELSDAQTKIVEETTTSAASSITTSTSSSHCDAALLVVATPHCATSPSLSLQNATDTAVQPSSSLIKSLLANKVTQRQQKNQKEINTAANSSQSSASTSTNASANALTQQPIKVASTALSALVNNPLMQNTPVKVGQTTIKPLNPQVPLEKKPLLESTPPPLAPLSGNNVAKDASGRPVIIANQMLVEILDKKGGEPPTPSTIIKRKIEECTEPAKRQALEPINAKEDPQVTPSKNAANLYAEMAASILEDEDLEDIPPLPAVITTSSTSTISTQSKLNESIQQQQLLIPAKIQQATLPGVQRQLVFQSNQPPQLKLTAHSGVAPSNQLPTAMATIKTDQGLQTVPVILQQKSLEQAQPQQLIQQVITQNIPQAAPQQQPTQYVLATNQQGQTYLVAQQPQPQPPPPQQTVLVTQTPQQQSAGTKTIIILQQQTMAGQQTHPSQPQLITGGSQKMIMRTPQGQVLVAQRPQPSLPASTTQQYFINPQTGTATHIHVPVSGSAITANVSSVSSSNQFLQRNQILSTSQVTTIAPTQTSSGQISPSLLSQLNHIPATIKLHQPQMPTTTVSSVNQHQPATISRIGKAVSIVQSTPGLTVSPSPIQIPQLQQHQSIIQQHIISGPSEKRQMILGGRAIEIKETVITQTPPPAQQSQLNSQTIITKQVLPQQQQQQQQQQQTPQQTQQIRTVIEQQQHPSIIQQKLCLQQQTQKSGEQINIMQSSLPTKSPTAAQSVAQQSASQSPQPSSNAIVVQQIKAHTQQQSAIPVVNNKMVATEPPPLTQTARTSNISQPQPKEVSKLNEISNISGNAATTVATVATTAQAVSTSSTPPPASTVQTPLVKPILPMPQLPQVQLPPGVAAAAAANATPPLDPNWLYVCDWRNCPRRKYKSLNDLQHHAFTVHCPDHLDPAAEIFCQWGVGPGLCDGIPRKRYSLMTHIIDRHLTTDSLHAAAQRRVATGTVNLQPTQAPVTIVRNVEAAQAQAQRNNTASPAPSTSSSSSGSQLYGIGVATSSAMNAIKRHTADYVKEVMDENEGPVTKSIRLTAALILRNLVTYTSTAKRNLRRYEPHLSNIALSNVESSGAISHILFELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00190470;
90% Identity
iTF_00193334;
80% Identity
-