Basic Information

Gene Symbol
Arid2
Assembly
GCA_000789215.2
Location
NW:1169902-1176412[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.4e-25 9e-22 76.8 0.0 2 89 81 166 80 166 0.95

Sequence Information

Coding Sequence
ATGTCTCTACAAGAATCGTTGAAAGGTTCAGTGTTTGTAGGGAATGACGCCAACAACGCACCGGCAACAATTGCAAATGCAGTCCCAAGTGCATGTCCTGCTAATAATGGAACACCTTTAcgtataaaaagttttcatataatgGGTACACCAGCAACAAATATTGATGCTGCTGTGTTAGTAAATCCAACTAATACCCCTAATAACATACTTCCCAAGGGAAAAACTTTACCCAAAGCTCCAGACGAATTTTATCGTGACCTACAACAATTTCATGAGAGGCGTGCtacacCAATTATGTACACGCCGAAAATTAGTGGGCGAGAAATAGATCTTCACCGACTTTACAGTGAAGTGACTGAACGCGGTGGTTTCAACAAAGTGAATCAAAGAGATGAATGGGATGAAGTCTTGCCAGTATTAGAAATTCGCGATAAATGCGTAAATGCTACTGCAGCAGTGAAGTATATATACCGACGGTGTCTAGAGAAATATGAGAGGCAGAACTTTTTCGGCGAAGATCCAGATAAAATGGAAGCACTAGAATCTGCAGATTCGATCGAAGGTGGTGGTCGGTCGCGAAGTCGTTATCCGGCGTCTATTTATTCAAGCAATAACGTTAATACCAACGTCAATGCAGTTCCAATGGCTTACAATTACAGCCAACATATTGTTAATATGGATAGACGTCGTACTTATAAATTCTCTACCGATCTTCATAAACCGTCACCTTATGAGAAGCTGATGCTATCTCTAATTTCACCTCTTCCTAATGAACAagattttgcaataaatgtttGCTCATTaatgtcaaatgaaaataaacacacactaaAGCTGAACGAATATCCAAAACTTTTGGATGTGCTGCTGGCTCATACGGGAGTGTTTCCAGATTACACTTTGCGCAAATTGTTTCAACATGTTTACACACAAGTACGCGAgcattcacttttcaatttttggCGCGACTTATTACGTGACAAaccacaaattttaaatttgtattctgATGAACAAGCTATGCGTGACGCAGGACTAATAAATGAAGAAGATACAGAAAAGGTAAAAACATTTGACGACGACATGgatttggattttttaaatttgggaCCCGGCGAAGGCACACAAGAGTATGTAGGTCAACGTGTCCAGCAAATTGTTGCAATATTTCGAAATCTTAGCTTTTTTGAGGAAAATATCAATGTGTTTGCAAAAAATCGATCATTTATGCGTTTCATAGTGATGGGTGCAAATATACGCTGGGGTAATCTACATAACCAGATTTTGGATATAGCCGGCAATATCGCCACTGAAATAGAACTGTTAGATCCATCGACAGACGACGTTTCACGCAATTTATTAGTTACACTCTGCGATGGCATTGAAAGTATGGATCGCGGTGTAATCATAAACAGTTTGGAGACACTTTACAAACTCTGTCAAACCGATGGCAATGAGGAACACATTAACAAGTGTTTAAATCTTAAGTTTTATGAAAGCATTTGtcaatttctttgtttaaatGATAtaatgcttttaatatttacacTTGAAACGATATACGCGTTAACTTCATTGGGGACACGGTCATGTCATCTAATAATGCAGGTACGAGGTATTGTAGACCAGTTAGTGTCTTTGGTCACTGTCGAAGCCCAATCATATGGGCCAGATGGTTGTATTTTGATGCGAGTTGTAGAAACAGTGCCAGGTAATATGTTGCCAATGGTTGCACAAAACATCGCGAATCTGCAAAATGTCGCAGTTTTACAGAAACCTCCACATGTGCTTGTGCCAACATCTCAATTGCCAGCACCGCAAGCACCTGTACCTATGCAAGTGATGTCAACACAAATTACACCTTCACATCCGCAATTGACTACTGTGAAAGTGCCACAAGTTGTAACTGATTCCTCCCAAAACCCACAACCCATGTTGGTGGATCAGACAACTACGATGCAAACAGCAACGACTGTACAGCAACAGGAAACGTCGACAGTACAACAGAACGTAACGAATACAGCCCAAGTACCGACTGGTCCGACCCAAAATTTTTCACACGAGGACGAACAATATGCTTTGGCATGGCTAGGCGCTACATTTGAGCGAGTAACAACATCAGATAGTCATGTAGAGCAACAAGAACTCTATCGCATGTACTTAGCTCACTGCCAGAAGTTCGGTAAACACTCTGTTGTTAATCATTTACAATTTCCACGTCTTGTACGCTTGATATATACGAACAATGTGGGTCCCATGTCCGCTCGTCGTAGTGATGGTACGGAATTGTCAGGTTTTTACTACGTTGGTATAAGATTGCGCGCCCAGCCATTACCCATACAATCCACCAAGTTACCTCAAAATCAGACTACAACCGCTGGAACAACGCCTGCACGCAAACTGAAGAAAAAACCCAAATTGCAGCATGAACCCGATGTTACATCTGCAGATGTTACAACTCCTACACTGACTTCGACTAATGTAACCACATCAGCTATCCAAGAGCTATCTGATTCCcaaccaaaaattgttgaagaaacaACTACATCTACTGCATCGTCTGAAACCACATCCACCAGCTCAACTGGTGACACAACTTTGTTAGTAGTGTCGACATCAACTTGTTCTACATCACCATCGTTGTCTTTACAAAACTCATCAGATTCAGCAGTGCAACCTTCTTCTTCACTGATTAAAAGTTTATTGGCCAGCAAGGTGACACAACGTCAGCAAAAAAATCAGAAGGAAATAAATACCGGCGCCAACAGTAGCCAGATGTCGTCGATTACTTCGACAAATGCTTCAGTGAACGCTCTTACGCAACAACCAATAAAAGTTGCCAGTACGGCTATTAGCGCTTTAGTGAATAATCCCCTAATGCAGAATACTCCTGTGAAAGTTGGGCAGACTACCATTAAGCCGCTAAATCCACAAGTGCCCTTGGAAAAAATGCCAATGCTTGAATCAACTCCACCACCATTGGCACCACTTAGTGGCAATAATGTTGCCAAGGATGCAAGTGGACGTCCAGTAATTATTGCCAATCAAATGCTAGTAGAAATACTTGATAAAAAAGGTGGAGAACCACCAATGCCCAGCACAATTATTAAACGTAAAATGGAGGAGGGTACGGAAACCGCAAAACGAATAGCTTTGGAATCAATAAACTCCAAAGAGGATCCCCAAGTAACACCATCAAAGAACGCCGCTAATTTATACGCAGAGATGGCTGCGTCCATATTAGAAGACGAGGATTTAGAAGACATACCACCACTACCAGCTGCAACAACGACTTCGTCAACATCTACTATCTCAACGCAATCAAAATTGAATGAATCCattcaacagcaacaaatgctaATTCCAGCAAAAATTCAACAGTCTAACCTGCCAGGTGTTCAGCGTCAGCTAGTTTTTCAATCAAGTCAACCGCCTCAGTTAAAGCTGACCGCCCACGGCGGTGTTGCGTCTTCTAATCAGCTGCCCACAGCCATGGCTACCATAAAAACAGATCAAGGATTACAAACAGTACCagttattttacaacaaaagccACTAGACCAAGCACAACCCCAACAGTTGATACAACAAGTAATCACACAAAATATACCGCAAGCAGCGCCACAGCAACAACCAACTCAGTATGTGCTTGCCACAAATCAACAAGGTCAGACATATCTTGTGGCACAACAACCGCAGCCACAACCACCACCGCCACAACAAACGTTGCTAGTCACTCAAACGCCGCAACAACAATCGGCTGGTacgaaaacaattattattctTCAGCAGCAAACGATGCCCGGTCAGCAAGCACATCCTCCGCAACCACAGCTCATAACAGGTGGTTCACCAAAGATGATCATGAGAACGCCACAGGGTCAAGTGTTAGTAGCACAGCGCCCTCAACCGTCGCTACCCGCATCAACAACACAGCAGTATTTCATAAATCCACAAACGGGCACAGCTACACATATTCATGTCCCGGTTACCGGTAGTGCCATTACTGCCAATGTTTCGAGCAGTAGTCAGTTTCTACAACGCAATCAAATATTGTCAACTTCTCAGGCAACCACTATCGCCCCAACGCAAACGAGCTCTGGGCAAATTTCACCGTCGTTACTTTCACAGCTGAACCACATTCCAGCTACGATTAAGCTTCATCAACCACAGATGCCGACCACAACTGTACCCTCTGTAAATCAACATCAGCCAGCAACCATTTCGCGTTTAGGTAAAACAGTTTCCATTGTACAGTCCACACCAGGCTTGACAGTATCACCGTCGCCCATACAAATACCGCAATTGCAACAGCATCAATCtattatacaacaacacataatATCCGGACCATCGGAAAAACGTCAAATGATACTTGGTGGACGAGCTATTGAAATTAAGGAGACAGTAATTACGCAAGCACCACCACCTGCGCAGCAGAGTCAATTGAACTCTCAAACGATTATAACGAAACAAGtactgccacaacaacaacagcaacaaccgccACAACAAATCCAACCAATACGCACAGTTGTTGAACAACAGCAGCATCCATCAATTATTCAACAGAAGTTGTGTTTGCAACAACAGCCCCAAAAGtcTGGTGAACAAACCAATATAATGTACTCTTCTTTGCCAACCAAATCTCCGACTGCATCTCAAAGTGGCGTCCAACAATCAGCATCACAGTCGCCGCAACCATCCAGTAATGTAACTGTTGTGCAACAAATCAAAGCGCACACACAACAGCAAATTGCACCATCTGTTGTTAACAATAAAATGGTTGCTTCGGAGCCACCCCCTCTAACTCAGACCGCACGCACAACCAATACTAACCAACCGCAACCAAAGGAAGTTTCCAAACCCAATGAAGTATCAAATAATTCTGGCAATACAACAACCACAGTAGCAACAGTTGCACCAACAGCACAAGCTGTGCCAACTTCAAGTACCCCACCACTAGCAACCACTGTTCAAACGCCATTACCGAAACCCACACTTCCGATGCCCCAACTGCCGCAAGTTCAGTTGCCACCTGGTGTGGCAGCGGCCGCTGCAGCCAATGCAACACCACCTTTAGATCCCAACTGGTTATATGTTTGCGATTGGCGCAACTGTCCGCGCCGTAAATACAAATCTAGTAATGATTTGCAGCATCATGCCTTTACGGTGCATTGCCCGGATCATCTGGATCCGGCTGCGGAAATTTTCTGCCAGTGGGGTGTGGGTCCAGGTCTTTGCGATGGCATACCACGCAAACGTTATTCACTTATGACACACATAATAGATCGTCACTTGACCCCCGATAGTTTACATGCCGCTGCTCAACGACGAGTAGCAACAGGCACAGTAAATTTGCAGCCGACTCAATCACCGGTAACTATAGTTCGGAATGTAGAGGCGGCACAAGCGCAGGCGCAACGTAACAATACCGCCTCACCGGCGCCATCgacatcatcgtcatcatctgGTTCACAATTGTATGGAATCGGGGTCGCCACTAGTTCAGCTATGAACGCTATCAAGCGGCATACAGCGGACTACGTCAAGGAGGTAATGGATGAAAATGAAGGACCGGTAACGAAAAGCATACGGTTAACCGCCGCATTGATATTAAGAAATTTGGTTACCTATACCAGCACAGCGAAGCGCAATTTACGGCGTTATGAACCGCATCTATCCAATATAGCATTGAGTAATGTGGAGTCAAGTGGCGCGATTTCGCACATTCTTTTCGAGTTAAATAATTaa
Protein Sequence
MSLQESLKGSVFVGNDANNAPATIANAVPSACPANNGTPLRIKSFHIMGTPATNIDAAVLVNPTNTPNNILPKGKTLPKAPDEFYRDLQQFHERRATPIMYTPKISGREIDLHRLYSEVTERGGFNKVNQRDEWDEVLPVLEIRDKCVNATAAVKYIYRRCLEKYERQNFFGEDPDKMEALESADSIEGGGRSRSRYPASIYSSNNVNTNVNAVPMAYNYSQHIVNMDRRRTYKFSTDLHKPSPYEKLMLSLISPLPNEQDFAINVCSLMSNENKHTLKLNEYPKLLDVLLAHTGVFPDYTLRKLFQHVYTQVREHSLFNFWRDLLRDKPQILNLYSDEQAMRDAGLINEEDTEKVKTFDDDMDLDFLNLGPGEGTQEYVGQRVQQIVAIFRNLSFFEENINVFAKNRSFMRFIVMGANIRWGNLHNQILDIAGNIATEIELLDPSTDDVSRNLLVTLCDGIESMDRGVIINSLETLYKLCQTDGNEEHINKCLNLKFYESICQFLCLNDIMLLIFTLETIYALTSLGTRSCHLIMQVRGIVDQLVSLVTVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIANLQNVAVLQKPPHVLVPTSQLPAPQAPVPMQVMSTQITPSHPQLTTVKVPQVVTDSSQNPQPMLVDQTTTMQTATTVQQQETSTVQQNVTNTAQVPTGPTQNFSHEDEQYALAWLGATFERVTTSDSHVEQQELYRMYLAHCQKFGKHSVVNHLQFPRLVRLIYTNNVGPMSARRSDGTELSGFYYVGIRLRAQPLPIQSTKLPQNQTTTAGTTPARKLKKKPKLQHEPDVTSADVTTPTLTSTNVTTSAIQELSDSQPKIVEETTTSTASSETTSTSSTGDTTLLVVSTSTCSTSPSLSLQNSSDSAVQPSSSLIKSLLASKVTQRQQKNQKEINTGANSSQMSSITSTNASVNALTQQPIKVASTAISALVNNPLMQNTPVKVGQTTIKPLNPQVPLEKMPMLESTPPPLAPLSGNNVAKDASGRPVIIANQMLVEILDKKGGEPPMPSTIIKRKMEEGTETAKRIALESINSKEDPQVTPSKNAANLYAEMAASILEDEDLEDIPPLPAATTTSSTSTISTQSKLNESIQQQQMLIPAKIQQSNLPGVQRQLVFQSSQPPQLKLTAHGGVASSNQLPTAMATIKTDQGLQTVPVILQQKPLDQAQPQQLIQQVITQNIPQAAPQQQPTQYVLATNQQGQTYLVAQQPQPQPPPPQQTLLVTQTPQQQSAGTKTIIILQQQTMPGQQAHPPQPQLITGGSPKMIMRTPQGQVLVAQRPQPSLPASTTQQYFINPQTGTATHIHVPVTGSAITANVSSSSQFLQRNQILSTSQATTIAPTQTSSGQISPSLLSQLNHIPATIKLHQPQMPTTTVPSVNQHQPATISRLGKTVSIVQSTPGLTVSPSPIQIPQLQQHQSIIQQHIISGPSEKRQMILGGRAIEIKETVITQAPPPAQQSQLNSQTIITKQVLPQQQQQQPPQQIQPIRTVVEQQQHPSIIQQKLCLQQQPQKSGEQTNIMYSSLPTKSPTASQSGVQQSASQSPQPSSNVTVVQQIKAHTQQQIAPSVVNNKMVASEPPPLTQTARTTNTNQPQPKEVSKPNEVSNNSGNTTTTVATVAPTAQAVPTSSTPPLATTVQTPLPKPTLPMPQLPQVQLPPGVAAAAAANATPPLDPNWLYVCDWRNCPRRKYKSSNDLQHHAFTVHCPDHLDPAAEIFCQWGVGPGLCDGIPRKRYSLMTHIIDRHLTPDSLHAAAQRRVATGTVNLQPTQSPVTIVRNVEAAQAQAQRNNTASPAPSTSSSSSGSQLYGIGVATSSAMNAIKRHTADYVKEVMDENEGPVTKSIRLTAALILRNLVTYTSTAKRNLRRYEPHLSNIALSNVESSGAISHILFELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2