Bmin003089.2
Basic Information
- Insect
- Bactrocera minax
- Gene Symbol
- -
- Assembly
- None
- Location
- JAPVRH010002689.1:553-4634[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.052 4 8.4 4.4 2 23 102 124 102 125 0.95 2 17 2.3 1.8e+02 3.2 2.8 2 23 173 195 172 195 0.92 3 17 1.6e-05 0.0012 19.5 0.3 2 23 210 232 209 232 0.94 4 17 0.00074 0.057 14.2 0.0 1 20 242 261 242 262 0.95 5 17 3.1 2.4e+02 2.8 3.2 1 23 288 316 288 316 0.79 6 17 8.6e-05 0.0066 17.1 2.7 1 21 326 346 326 347 0.96 7 17 2.6 2e+02 3.0 0.1 3 12 471 480 470 484 0.87 8 17 1.4e-06 0.0001 22.8 0.9 3 23 516 537 514 537 0.96 9 17 5.7 4.4e+02 1.9 0.5 1 17 561 577 561 578 0.90 10 17 0.27 21 6.1 4.3 1 22 592 613 592 613 0.96 11 17 1 79 4.3 2.0 3 12 642 651 641 663 0.80 12 17 0.56 43 5.1 0.1 3 23 774 795 773 795 0.96 13 17 4.5 3.5e+02 2.3 0.4 3 23 954 976 952 976 0.89 14 17 0.00086 0.066 14.0 0.1 1 23 1104 1127 1104 1127 0.95 15 17 1.3 1e+02 3.9 0.7 1 23 1203 1226 1203 1226 0.96 16 17 0.036 2.8 8.9 0.6 3 23 1236 1256 1235 1256 0.96 17 17 0.0019 0.14 12.9 1.4 1 23 1263 1286 1263 1286 0.96
Sequence Information
- Coding Sequence
- atgGAGAAAGAATCAATTACTGTGCCGCAAGATATACCTAAACAAGCTATTAATAATCAGTCGAATATTgacgaaaatcggaaaaaggACACGAAATTAATAGGAGATGAATATGACAGTGATTCCAACACTAACTCCAATGCTGATAATGAGGAGTATTACGACTCGGGCTCTGAAAGcagttttcattttgaatatgGACCTGACATGGGCCGTTCATTTCCAGTTTTACAAAGTTTGGATGCAAAGAAGAAAGCATATATAAAGAGCGCCAACTATATTTATGGTAAATATGTTATGAGACAATGCCCCATGTGTGATTCAGAGTTTAATTCTGCCCATTGCTGGAAAAAGCacattaattacatacatCATCTAGCTACGCCGGAAGATTTACAATTCAAATACAACGAAATAGGTGCAAAGTGTAAAATGTGTGATTTTCAAACAGCTACTCCAGATTTCAACAAACTATTAGATCATCAAATCTCACATATGCCATTTAgtcactttttaaaatgtaaactatGTGATTGGAGAACTAAAACACATCCTAGcatgaattttcatttacgtCAACAGCATTCAGATAAACTGGAtatgacaacaaaaagtattgaGTTAACGGTTTGTCCATACTGTCAGCAAGAGTTCTCGTCACAATGGTATTTGCGTAAGCATATGATTCAGGAACATGAAAAGACTATTGACGATAGAAcatgttttatttgcttggAATGCGGTGAAGAATTTTCCACAAATGTTAGTTTACGTGCgcatgtatttgaaaaatttgcatacaagtCGGTAGAGGAACTAGGCTTCAAAGAGGTCATATCACACGATGATAATGATATTTCGTTCAAATGTACCCAATGTCCCACGATTTATCGCAAAAATACATCCAGTCGGACATTAACTAACTTACGCGAACATTATATGTTGCATTTAGGCGAACCTACTGGTAAACacgcatacaaatgtaaatattgtgaTGAAAGTTTTCGCCGATTTGACAATATGCGCTTACACATTTGTGAGGAACTACGCAAATCTTTGCAGAATGGCGCCAATTCACATACCATTATAGGTGCGAAAAACCGTAGAAATAAGTTGGCAAAAAaacATATGCATCAAGAACCAGTCGAACTGAAGAGAGActacatgaaaaatattcgtCATGTTTGTTTGAAATGTGGAAATTCATATGGTAAGTTGTTTCATTGCAAAcggcatatgtatataaaacatgGCATGAGCAAGCCATCACGGCTGGACTTTAAAAAGATAGCAAATCAAAGTGCATCCGAAGTTTATGAATGCATGATATGCGAAGAGTTCACCTGCGATTTCGATTTAAATACAATGTTAGTGCACGCGCGTATACATACCGTATATGACCCGTTActatgtaaaatttgtaatacatCATTCGCTTACGAAACTGACATACCAGGACATGTTTGTATGGATGTGGAGGTTGTTGAAGCAGTGAaagAATCAAGATTTCCACGAGAGATCCCCGTACAAAATATGGATACTTTTTGCCCTAAATGCGATTTAACATATACAACACCTTCCTCTTTAACAAGACACATGAATAGAATGCATGGAATGCATGAACCTTATGGGCTTGGCTTTGTAGTGTGCGACAAAATTAATGATAGCAGTGAGGATGTATTTCGTTGCACcgaatgtgaaaattttaccataaatgagaaaaatttaaaaactatgcTGGAGCATGCGCGACTTCATATGCCCTATGAAAGTTTCAGATGTGTCTTCTGTAAGGAACGATTTCGTTTCAAAGAGCAAGCGCGACAACATCAATGTACAAATAATACGACTTTTACTGTTAATGCAGTGGATAAATATGATCAAAAGATCTTGAAGACGCGCTTAAATAAAATGGGGCGTTTATGTCCTAAGTGTGgtaaaaagtttgcaaaaacaacagtttGTAAAGTGCATACGACAAATATACATGGGTTAGATAAACCTGCTGGACTTGGCTTTGAAGCACTCAATGCGGATAATGTTGATAATAATCGAGAAACATACCGTTGTATTGAATGCTTGAGCTTCATTGtagaaaaatttgatttaagttTAATGTCAGAGCATGCAAGAGAACATTTTCCTTACGACAGTTTCTGGTGCATGTTATGCGGCgaacaatttaaattcaaattgcaAGCAATAGAACATAAATGCCCAAATGATACAATTAAAGTGGAAGAAAATAACGACGTTGATTTCGAAAACACAGCACAtacaaaatatccaaaaacatttgaaaagaTTATAAGGAAATTTTGTCCCGAATGCAACTTTGAAGTACCAACAATGAAAGCCTGGCGTTGGCATATAAGTAAATACCATGAAATGACAACACTTGCGGGATTACAGATGAAGCAGGCAAAGGGCAATTTAGTAGAATGTTTGATTTGTGAAGTGAAGACGACATACATAAGACGTTTAGATCACCGATTTGTGCATCTGCCCTTTAAGCCTTATCAATGCAGATATTGCTTGGAATATTTCATCGAAGTTGAAAAGGCGAAAGCGCATTGTGGTGATTGCACTGTTGCGCCAACAGAATTCGACGAAACGGAGGAAATAAAAAAGCCGCAAGCAAATAAGCGTATAGCCAAACGCGTGGAATCGAAATTGGATagtaaaagaacaaaaatacaaaatgagcACGAAACTGCATCACAGGTAaaagtgaatgaaataaaCTCATCCAGTGAACGGATAGAATCCGAAAGTGAAAATGATAATAGAGACGCCAACAGAGGTATTAGCGTTGTACTTACTGATGATAATGACTTTGCAAAGTTCATACGTATATGCTGTCCGTTATGCCCAGATACCGAATTTGAATCAAATCTAATGCTAACACGACATTTCAACGAAGCACATAATAACTTTCGCGAACACTTCACAATTCATCCAACAAATGCGGCGAATTGTAAAtcgtgcaataaatattttaatatcatatacAAGAAGACTATGATAAAGCactatttaagtgaaattaacgCTACATGTTTCTGTTGTCGTCTatgtgataaaaatattttatattttgaaacaatgcGTTCACACCTGCTAGATGATCATCAAGCTGTGATTGCCGGACAGCAGACACATGAGAATAGTAGCACACCCACAGAGGTTGGTGAGGAGGTAGATCCTTTGAAAGTTACTGCTGTGGATATATCGAAAGTATCACGCACCACCATGGCAATACCGACTAGTAAAACTGCggtatttaatgaatttaatgcatatatttcatatgcaTGTCCAGAATGCAATGAGCCCTTCGATACATCTGAACAGTGGCATTTACACATAAATGGTGCACATAGTTTCTTCGAACAACATCAGTTGAATATTGAAGCCACATCGGATGGTTTTAAGCGTTGCAAACAATGCAGTGTTAATATAAGTGGCGGTATCTTGGCGGAGCAACGACATAAATTAACACATATGCAATACAAATCGTTCATTTGTATACTGTGCCAACATCGCTCGACCACTTTGGGTGTGCTCACACAGCATTTTCGCCGTCGCCACTTTGCAAAGGGGACGTTTAAGTGTGTGCTATGTCCAAGTGTACTAAATACTTCATGCGAACAAATCGAACATATGAAAAATGAGCATGATCCAAGTGAATATCCATCAAAATTATGTCGCGTCTGCTTCAGCATGTTCAGTTCAAATAACGCACTGAACACCCATATGGATTTGCATAACCCCAATCGGAAAGTGTTTCAATGCGACTATTGCGATCGTTATTACAAGTACAAGAGGGAACTGGGTTTACATGTACGTGCTAAACACCCCGAACAAGAAGCCAAAATCAGTGATAGAAGTCactaa
- Protein Sequence
- MEKESITVPQDIPKQAINNQSNIDENRKKDTKLIGDEYDSDSNTNSNADNEEYYDSGSESSFHFEYGPDMGRSFPVLQSLDAKKKAYIKSANYIYGKYVMRQCPMCDSEFNSAHCWKKHINYIHHLATPEDLQFKYNEIGAKCKMCDFQTATPDFNKLLDHQISHMPFSHFLKCKLCDWRTKTHPSMNFHLRQQHSDKLDMTTKSIELTVCPYCQQEFSSQWYLRKHMIQEHEKTIDDRTCFICLECGEEFSTNVSLRAHVFEKFAYKSVEELGFKEVISHDDNDISFKCTQCPTIYRKNTSSRTLTNLREHYMLHLGEPTGKHAYKCKYCDESFRRFDNMRLHICEELRKSLQNGANSHTIIGAKNRRNKLAKKHMHQEPVELKRDYMKNIRHVCLKCGNSYGKLFHCKRHMYIKHGMSKPSRLDFKKIANQSASEVYECMICEEFTCDFDLNTMLVHARIHTVYDPLLCKICNTSFAYETDIPGHVCMDVEVVEAVKESRFPREIPVQNMDTFCPKCDLTYTTPSSLTRHMNRMHGMHEPYGLGFVVCDKINDSSEDVFRCTECENFTINEKNLKTMLEHARLHMPYESFRCVFCKERFRFKEQARQHQCTNNTTFTVNAVDKYDQKILKTRLNKMGRLCPKCGKKFAKTTVCKVHTTNIHGLDKPAGLGFEALNADNVDNNRETYRCIECLSFIVEKFDLSLMSEHAREHFPYDSFWCMLCGEQFKFKLQAIEHKCPNDTIKVEENNDVDFENTAHTKYPKTFEKIIRKFCPECNFEVPTMKAWRWHISKYHEMTTLAGLQMKQAKGNLVECLICEVKTTYIRRLDHRFVHLPFKPYQCRYCLEYFIEVEKAKAHCGDCTVAPTEFDETEEIKKPQANKRIAKRVESKLDSKRTKIQNEHETASQVKVNEINSSSERIESESENDNRDANRGISVVLTDDNDFAKFIRICCPLCPDTEFESNLMLTRHFNEAHNNFREHFTIHPTNAANCKSCNKYFNIIYKKTMIKHYLSEINATCFCCRLCDKNILYFETMRSHLLDDHQAVIAGQQTHENSSTPTEVGEEVDPLKVTAVDISKVSRTTMAIPTSKTAVFNEFNAYISYACPECNEPFDTSEQWHLHINGAHSFFEQHQLNIEATSDGFKRCKQCSVNISGGILAEQRHKLTHMQYKSFICILCQHRSTTLGVLTQHFRRRHFAKGTFKCVLCPSVLNTSCEQIEHMKNEHDPSEYPSKLCRVCFSMFSSNNALNTHMDLHNPNRKVFQCDYCDRYYKYKRELGLHVRAKHPEQEAKISDRSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00193166;
- 90% Identity
- -
- 80% Identity
- -