Basic Information

Insect: Bactrocera minax
Gene Symbol: -
Assembly: None
Location: JAPVRH010000162.1:11822-27744[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.7e-05 0.0036 17.9 1.7 1 23 554 576 554 576 0.97

2 18 1.4e-05 0.0011 19.6 0.4 1 23 582 604 582 604 0.97

3 18 0.0012 0.094 13.5 0.5 1 23 610 632 610 632 0.95

4 18 2.4e-05 0.0018 18.9 3.1 1 23 638 660 638 660 0.97

5 18 5.4e-05 0.0041 17.8 4.7 1 23 666 688 666 688 0.99

6 18 9.8e-05 0.0075 16.9 5.7 1 23 694 716 694 716 0.97

7 18 4.8e-07 3.7e-05 24.2 4.3 1 23 722 744 722 744 0.98

8 18 1.7e-07 1.3e-05 25.6 2.4 1 23 750 772 750 772 0.97

9 18 0.0001 0.0077 16.9 6.7 1 23 778 800 778 800 0.97

10 18 2.9e-05 0.0022 18.6 6.5 1 23 806 828 806 828 0.98

11 18 4.9e-06 0.00037 21.0 4.5 1 23 834 856 834 856 0.98

12 18 1.8e-05 0.0014 19.2 7.1 1 23 862 884 862 884 0.98

13 18 9.2e-06 0.00071 20.2 7.6 1 23 890 912 890 912 0.97

14 18 1e-06 7.9e-05 23.2 7.7 1 23 918 940 918 940 0.98

15 18 0.00032 0.025 15.3 9.5 1 23 946 969 946 969 0.95

16 18 0.00027 0.021 15.6 0.5 1 23 975 997 975 997 0.97

17 18 0.00039 0.03 15.0 4.5 1 23 1007 1029 1007 1029 0.98

18 18 1.4e-05 0.0011 19.6 1.6 1 23 1035 1058 1035 1058 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.7e-05	0.0036	17.9	1.7	1	23	554	576	554	576	0.97
2	18	1.4e-05	0.0011	19.6	0.4	1	23	582	604	582	604	0.97
3	18	0.0012	0.094	13.5	0.5	1	23	610	632	610	632	0.95
4	18	2.4e-05	0.0018	18.9	3.1	1	23	638	660	638	660	0.97
5	18	5.4e-05	0.0041	17.8	4.7	1	23	666	688	666	688	0.99
6	18	9.8e-05	0.0075	16.9	5.7	1	23	694	716	694	716	0.97
7	18	4.8e-07	3.7e-05	24.2	4.3	1	23	722	744	722	744	0.98
8	18	1.7e-07	1.3e-05	25.6	2.4	1	23	750	772	750	772	0.97
9	18	0.0001	0.0077	16.9	6.7	1	23	778	800	778	800	0.97
10	18	2.9e-05	0.0022	18.6	6.5	1	23	806	828	806	828	0.98
11	18	4.9e-06	0.00037	21.0	4.5	1	23	834	856	834	856	0.98
12	18	1.8e-05	0.0014	19.2	7.1	1	23	862	884	862	884	0.98
13	18	9.2e-06	0.00071	20.2	7.6	1	23	890	912	890	912	0.97
14	18	1e-06	7.9e-05	23.2	7.7	1	23	918	940	918	940	0.98
15	18	0.00032	0.025	15.3	9.5	1	23	946	969	946	969	0.95
16	18	0.00027	0.021	15.6	0.5	1	23	975	997	975	997	0.97
17	18	0.00039	0.03	15.0	4.5	1	23	1007	1029	1007	1029	0.98
18	18	1.4e-05	0.0011	19.6	1.6	1	23	1035	1058	1035	1058	0.96

Sequence Information

Coding Sequence: ATGAATAGTGAACATGCAACAGTAAAAGCAAGCGGTGGTGAGTCAGCGAAAGCCTCAATTACTATAGCCACAGCTAATGAATTGAATCAACAATATCAACAGCAGCAACTACATTCACCACAGCAACATATTAACAATTCTCATCATTTGCAGCAActacaattgcaacaacaacagacgCAAAACCATCAATTGAACGAGccACAGCAAATCCGAAGACAGCaaacagcacaacaacaattgcagctGCAGCAGTCGCAGCGGCAGAATAATTCAATGTCGTTGAACAGTGCAAGCGGTGGGGGTGGTGGTGGCTCCAACGCCATAGTAACATCCCCTTCCACTATGACCACTGTCACCGTCGGAGCTGGAGTCGGCATGGTTGGTGTTGCCGGTAATGCCCTAATACCACTGGCAGCCCCGGTCCAGCATCAGCCAGTTTCAATAGCAACTGTGACGGCAGCAACGATTGCAGCCGCTGCAGTTGGAGGTGGCACACCAACCACCCTAACCGCTACGCCTGTAACTATCGGTGGTCTGAGCATAAGTGTCACGAATCCTGTAGCTGTCGTTACTGGCAATATTGCTGATGCAAAGATAGGACAAACGAcattgcaacaacaccaacaacaaatacaccagcagcaacaaataataagttcAACTGGAGCCACAGTAGCAACGGGATCAACCACAACAACTGCACTATTGCCAAATGCACCAAACTTGAGCAAATATTGGGTAGTCTCAAATGGACAAGCGCTTCCCTATAACATTTTGCCAAATGGAACAATAATCACACAACATCAGCGGCAGCAAACAACGGAACAGGAAACACATTCACAACAACAGGTTCaattgcagcagcagcaacaacaacagcagcaaattcACGctgCGGTAAATGCAAACGATGACAAtcgacagcagcagcagcatatATCGCAACAGCAACATGTAGCCGCCGCTGTGCAGCAGTCACAGCAAactcaacaacagcagcagcagccacaacaacaacagcaacaactgttACAACGAGAAAATATTAAGGAGGAGAAACCATTTTTAGATAACGGAAAACTAAATCAGTCCATAGTTATGCAACACGTCGGCGCAACGGCTTCGGCGTCGACGACGTCCGGTGCAACCACCATAACGTTAGGTGCGCCGAAAACTGAAGTAAAAGATGATGTTGGAATGGGCAAACCGCCCATTGAAATGTATAAAGTTAACATTGAAGACTTTTCCCAGCTTTTCACGTATCATGaagtttttggtaaaattcaCGGTGATGTCATGAATCAGGCTGCTCATGCAGTGCCCAATGCCGCACCGCCACCACCGCACAGTAATGCAAGCAACAATGCCGCAGTTGCGGCCGTAGTGGCCAGCGCTaatgctgccgctgctgctgctgctgcggctgCGGCAGCCGCAAATACAACAAGCGGTGTGGTGGCCCCCACAACAACCACCAATCTAACAACGGCAATTAGCACTAGTGGCACCACAACTGCCCCCGCTACTGCTGTAACAGCAACCCCAACCGTGACCGGGGAGCTATTGATGCCTAAAATGGAGGGCGGTCTTCCGGTTGTGGATCAGACGACAACCATCGCGCTTGCACCTGATGGCACACCAATCGCTACTGGTACACATGTCTGTGACATTTGCGGCAAAATCTTCCAATTTCGCTATCAATTGATCGTACATCGACGTTATCATAGTGAACGGAAACCATTCAACTGTCAAGTTTGTGGACAGGGCTTCACCACCTCACAAGATTTAACGCGTCATGGGAAGATACACATTGGCGGTCCAATGTTTACGTGCATCGTTTGTTTCAATGTATTCGCTAACAATGCAAGTCTCGAACGGCATATGAAGCGACATTCGACAGATAAGCCATTCGCATGTACGATCTGTCAGAAGACATTTGCACGCAAGGAACATTTGGACAACCATTTTCGTTCGCATACAGGCGAGACGCCGTTCCGGTGCCAATATTGCGCTAAAACATTCACAAGGAAGGAACACATGGTGAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGgTCAAACACCTCACCAGTGCGATGTATGTGGCAAGAAGTATACACGCAAAGAGCACCTAGCTAATCATATGCGTTCACACACTAATGACACACCTTTTAGATGTGAGATATGCGGCAAAAGTTTCAGTCGCAAGGAGCACTTTACCAATCACATTCTCTGGCATACAGGCGAAACACCACATCGTTGCGATTTTTGCTCCAAAACGTTTACACGCAAGGAACATTTGTTAAATCATGTTCGTCAACATACGGGGGAATCGCCTCATCGTTGCACATATTGTTTGAAAACGTTCACACGCAAGGAACACCTAGTGAATCACATACGTCAGCATACAGGTGAAACACCGTTCAAATGCACCTATTGCACGAAGGCATTTACACGCAAAGATCATATGGTGAATCATATTAGGCAGCACACTGGCGAATCGCCGCACAAGTGCACATACTGCACAAAAACGTTCACCCGTAAGGAGCATCTGGTAAATCATGTGCGTCAGCATACTGGCGAATCCCCACATCGCTGCAGTTACTGCAAGAAGACATTTACGCGCAAGGAACATTTGACGAATCATGTGCGTTTGCATACTGGCGATTCACCGCACAAATGTGAATACTGTCAAAAGACATTTACGCGTAAGGAGCATCTGAACAATCATATGCGTCAGCACTCCAGTGACAATCCACATTGTTGCAATGTGTGCAACAAGCCATTCACACGTAAAGAGCATCTCATTAATCATATGTCACGTTGCCACACTGGTGATCGTCCTTTCGCTTGTGAAACTTGTGGTAAATCATTTCCACTCAAAGGAAATCTGCTTTTCCACCAACGTAGTCACACTAAAGGACAGGAATGTGAACGTCCGTTTTCATGCGAGAAATGCCCCAAGACCTTTATTTGCAAGggtCATCTTGTCTCACATATGCGTTCGCATTCGGGTGAGAAACCGCATGCCTGTACATTGTGCAGCAAGGCTTTTGTTGAGCGTGGAAATTTGAAGCGTCACATGAAGATGAACCATCCCGATGCGGTAATGCCTCCTCCGCCGCAACCCCATCCGCAAATACCAGCTGGTATATTGACATCGGTCAAAGAGGAAATAAAACCAATATTTCtTCCGCATCAAACACCGACCATGCACACCATCCAACAGATTACATCAGGCGCAGCTGCGGCAAATGCTGTGCAATTGGCTCCTAGTCTTGTGCCGTTGGTTACCTCAACGATAACTTCGCATAATAACCAAAaaccgcagcagcagcaacaacaacaacaacaacaacagcagcagcagcaacagcaagcacatcaacagcaccaacaacaggtgcaacagcaacagcaacagcagcaacaacatcaacagcagcagcaacaacaacagcagcaactaCTACAATTATCCTTACAACATCAGCAACAGCAGGAACAACATCGCcaacaccagcaacagcaacagcaacaggcACATCATCAACAAACACAGGCGCaggcacaacaacaagctcATGCGTCACAACCTCAACCACAACAGCCGCCACCTGTGCCTATTGCACTAATACAAACTGATCCGAGCGTCTTGGCGCGTGCCGCCATGCAATTGCAGCACCTGCCAGCGAATGTCGAGCAACATCCGGTGGTTTACTAA
Protein Sequence: MNSEHATVKASGGESAKASITIATANELNQQYQQQQLHSPQQHINNSHHLQQLQLQQQQTQNHQLNEPQQIRRQQTAQQQLQLQQSQRQNNSMSLNSASGGGGGGSNAIVTSPSTMTTVTVGAGVGMVGVAGNALIPLAAPVQHQPVSIATVTAATIAAAAVGGGTPTTLTATPVTIGGLSISVTNPVAVVTGNIADAKIGQTTLQQHQQQIHQQQQIISSTGATVATGSTTTTALLPNAPNLSKYWVVSNGQALPYNILPNGTIITQHQRQQTTEQETHSQQQVQLQQQQQQQQQIHAAVNANDDNRQQQQHISQQQHVAAAVQQSQQTQQQQQQPQQQQQQLLQRENIKEEKPFLDNGKLNQSIVMQHVGATASASTTSGATTITLGAPKTEVKDDVGMGKPPIEMYKVNIEDFSQLFTYHEVFGKIHGDVMNQAAHAVPNAAPPPPHSNASNNAAVAAVVASANAAAAAAAAAAAAANTTSGVVAPTTTTNLTTAISTSGTTTAPATAVTATPTVTGELLMPKMEGGLPVVDQTTTIALAPDGTPIATGTHVCDICGKIFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAVMPPPPQPHPQIPAGILTSVKEEIKPIFLPHQTPTMHTIQQITSGAAAANAVQLAPSLVPLVTSTITSHNNQKPQQQQQQQQQQQQQQQQQAHQQHQQQVQQQQQQQQQHQQQQQQQQQQLLQLSLQHQQQQEQHRQHQQQQQQQAHHQQTQAQAQQQAHASQPQPQQPPPVPIALIQTDPSVLARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358224;
90% Identity: iTF_00193723;
80% Identity: -