Bmin018179.1
Basic Information
- Insect
- Bactrocera minax
- Gene Symbol
- -
- Assembly
- None
- Location
- JAPVRH010008166.1:1130985-1137057[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.8e-09 1.4e-05 25.0 0.1 3 44 256 297 255 298 0.93 2 3 6.3 1.3e+04 -3.7 0.1 28 36 328 336 328 339 0.74 3 3 1.1e-08 2.3e-05 24.3 0.0 11 40 374 402 368 406 0.86
Sequence Information
- Coding Sequence
- ATGTCGGAAGTTGAGAATAACCAAGAAACCAACGGAACTAGTAATGGTGATGTGCctgaaattgaattgattaTTAAGGAAGAATTTATgcttgaaaatgaaattgtgggGAATGCGAACGAGCTCAACATCAACAGAGTAGCAGTTGACGACAGTTTAAATGATGTGGAcgagaaagaaaatatagttGAATCGAAATTACAATTAAAGCAATTGCAGCatcagcaacaaataaaagagtgcaaaacaacaaacacagaaAAATCAATCGCTCTACGAAAAGATGCTTTTGTGAAAAGGCGCAACGAGTTTTCAGATAGTGGCCATGTTCTTATGCTTACTCATCACGACaatcaacattttcaattcgAATATGTAGCCCCGAAGCAAAATGAGAACGTGCTGCTGGATACAGTCTCCGCTGTGGAACAACACACAACATGCTTTCAAATGGATGAAAATCTTAACAGAGAAAACTTATCCATAAATCATATGAATCGAGTTCCCTTTGCTCAAAAACATATGAAAGATGAACTGGTAGATAAAGGGGAATTTCCAAGTGACAATAACCCAGTAAACAATTTAGATTTCGCCGCAATGGTAGCCGAGGCATGCGAAGgaatttttgatgaaatcGAAAACGACTTGAGAGcatgcaataataatagcgTTTATAATAGCTGTCatgataatgaaataatttctgaTTCTGCGTGTAACGGTGCAGAACATATTGTGAAGAGAAAAAAACGAGCGCATAACTCGGAAGCGGTACAACTTGCTGCAAATGCCGTATTGGATGGCCGTATGAGTTTGGGGGAGGCCGCTAAGTGTTATAATGTGGTGCGTTCAACAGTGTCTTCACGAGTGTCCAAACATCCTAAACATAAAGGACGAAAATCGAATAAGGAATTAGAGGAGCTAATTTACAGTAAACTGAAGGCTGGTGTGCAAATTTCGGAAGTTTCACGCTCTTTACATGTTCCCAAGTCAActgttcatttatataaaacaagaCTGAAGAATGATGGATTGTTGCCCGCTGTATGGATTAGGAATGGCAGTAAGGATATGGTTGATCATGGCGTTCAAGAAAGATTATTGCAAGCATATCGTGGTCATATTGTAAACGGAATGTCAGTACGTTTCGCTGCTGAGTTTTTCTCGTTGCCACTTACAACCTTATGGCGATACATAAAACGGAGAAAAGGTCCCACTGTTGTTGACGATCAcattaaaaaatctgaaaaggAAGAATACACTGAGAAGGAAAGTTATGTTAACGTTTTAAATGACTTTGAAGAGAATCTgcatattaatgaaatgataTCATCTCACTCTCAAGCTTCGTATCCTACAGATCTGGAAACAGTTATTGAAAAAGAAGAACAAACGATAGAACAATCTTTATTAAATCAACTGTTAGAGTaa
- Protein Sequence
- MSEVENNQETNGTSNGDVPEIELIIKEEFMLENEIVGNANELNINRVAVDDSLNDVDEKENIVESKLQLKQLQHQQQIKECKTTNTEKSIALRKDAFVKRRNEFSDSGHVLMLTHHDNQHFQFEYVAPKQNENVLLDTVSAVEQHTTCFQMDENLNRENLSINHMNRVPFAQKHMKDELVDKGEFPSDNNPVNNLDFAAMVAEACEGIFDEIENDLRACNNNSVYNSCHDNEIISDSACNGAEHIVKRKKRAHNSEAVQLAANAVLDGRMSLGEAAKCYNVVRSTVSSRVSKHPKHKGRKSNKELEELIYSKLKAGVQISEVSRSLHVPKSTVHLYKTRLKNDGLLPAVWIRNGSKDMVDHGVQERLLQAYRGHIVNGMSVRFAAEFFSLPLTTLWRYIKRRKGPTVVDDHIKKSEKEEYTEKESYVNVLNDFEENLHINEMISSHSQASYPTDLETVIEKEEQTIEQSLLNQLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00192744;
- 90% Identity
- -
- 80% Identity
- -