Basic Information

Insect: Bactrocera latifrons
Gene Symbol: -
Assembly: GCA_001853355.1
Location: NW:2691670-2698884[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6.1e-06 0.00034 20.4 2.8 1 23 396 418 396 418 0.95

2 17 2.3e-07 1.3e-05 24.9 2.3 1 23 424 446 424 446 0.99

3 17 0.0057 0.32 11.1 5.3 1 23 452 474 452 474 0.99

4 17 7.4e-05 0.0041 17.0 0.4 1 23 480 503 480 503 0.97

5 17 6.2e-05 0.0035 17.2 0.2 2 23 516 537 515 537 0.97

6 17 0.001 0.057 13.4 5.8 1 23 615 637 615 637 0.98

7 17 3.1e-05 0.0018 18.2 0.7 1 23 645 668 645 668 0.96

8 17 0.00022 0.012 15.5 0.2 1 23 675 697 675 697 0.96

9 17 0.0008 0.044 13.8 0.3 1 23 1114 1136 1114 1136 0.99

10 17 0.11 6.4 7.0 0.3 1 23 1141 1163 1141 1163 0.95

11 17 6.2e-06 0.00034 20.4 1.1 2 23 1171 1193 1171 1193 0.93

12 17 0.002 0.11 12.5 0.1 1 23 1198 1220 1198 1220 0.96

13 17 5.2e-06 0.00029 20.6 8.0 2 23 1227 1248 1226 1248 0.97

14 17 3.1e-05 0.0018 18.2 0.5 1 23 1302 1324 1302 1324 0.98

15 17 7.1e-05 0.004 17.0 4.0 1 23 1330 1352 1330 1352 0.98

16 17 5.8e-06 0.00032 20.5 2.8 1 23 1358 1380 1358 1380 0.98

17 17 6.1e-05 0.0034 17.3 0.2 1 23 1386 1409 1386 1409 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6.1e-06	0.00034	20.4	2.8	1	23	396	418	396	418	0.95
2	17	2.3e-07	1.3e-05	24.9	2.3	1	23	424	446	424	446	0.99
3	17	0.0057	0.32	11.1	5.3	1	23	452	474	452	474	0.99
4	17	7.4e-05	0.0041	17.0	0.4	1	23	480	503	480	503	0.97
5	17	6.2e-05	0.0035	17.2	0.2	2	23	516	537	515	537	0.97
6	17	0.001	0.057	13.4	5.8	1	23	615	637	615	637	0.98
7	17	3.1e-05	0.0018	18.2	0.7	1	23	645	668	645	668	0.96
8	17	0.00022	0.012	15.5	0.2	1	23	675	697	675	697	0.96
9	17	0.0008	0.044	13.8	0.3	1	23	1114	1136	1114	1136	0.99
10	17	0.11	6.4	7.0	0.3	1	23	1141	1163	1141	1163	0.95
11	17	6.2e-06	0.00034	20.4	1.1	2	23	1171	1193	1171	1193	0.93
12	17	0.002	0.11	12.5	0.1	1	23	1198	1220	1198	1220	0.96
13	17	5.2e-06	0.00029	20.6	8.0	2	23	1227	1248	1226	1248	0.97
14	17	3.1e-05	0.0018	18.2	0.5	1	23	1302	1324	1302	1324	0.98
15	17	7.1e-05	0.004	17.0	4.0	1	23	1330	1352	1330	1352	0.98
16	17	5.8e-06	0.00032	20.5	2.8	1	23	1358	1380	1358	1380	0.98
17	17	6.1e-05	0.0034	17.3	0.2	1	23	1386	1409	1386	1409	0.92

Sequence Information

Coding Sequence: atgaattttcgcgttaatataaatatatgtcgTGTCTGCATGAAATCGGACGATGGCGTATCACTTTTGAATGATGAAGAATTGTGCGAAAAGTTTGTGTTTACAACGCATTTgaagcTCACTGAAAGTGATGATATGCCCTCGATAATTTGTTCTAAATGCTTAAAACGACTGCGAGTAGCCTATGATTTCGTAAAGTTAGCCCACGACtcggaaaaaaatttgaaaacgtttCTCGAAAAGATCAGCAAAGACTTTCAATTAGTAACAAATAACGCTATTGAAAAGTCAAATAACAACGAAGATGAGGATGATCTGTTGTCAAACATTCTTGATGAAGAGAATGCTGACAAGAAAACAGAAGCATCAACACAACTGTCGGTACAAAACGATGAAAGCACAATTTCTGCCTCCGAGATGTCTAGTGGTGTTAAAACTAATAACAGAAAAACTGCTATTGGAAAAACGGAAAACAGTATCGAACAAATAACACTGAAGACCACAAGATCTAGCTTAGGTCCATTAGAGGATCCATCGGAGGATATATCAAAagatatacacaaaaataaaatgaaattaaatcttAAGAAAGGAAATGTAGATAAAGAAATAAACACTTTCCAATCTTTTGAGTCCGATATTCAAGTAGAAATAGAAGAAAACCTAGATGATATTACAAAGTGTGAAGTTGAAACACCAAAAGAACATTCACCGGAACACGAAATACAAATACTTGAATATACCGATGAAGAATCTCAAACTGAACTAGAAATATTGGAAGAAAATCTTCAACCAAGTGACGACACCAGAAGCAGTCTTAGTACAGAGGAGCCGCAACCACAAAGTAGTGGAGGATTTCTTAAGGAATATCAAGCAATGCTTGATGAAGATGGCGAGTTTTTGGGAGAGAATAGTTCTAAACACGATAAAACTACAGCAGCTAAAGAATTGGATTACTTTGATGATAGTGAAGAACTATTGGACGACCATGACATCGAAATGAAATCTATGGTCGAAGATAACCTAGATGAAGAACAAAGTGTTGACACCACATCACAGCTGCAAACTGAAGTTgctcaaaaagaaattaaaagtaaaacacGTAAATATCATGCGAAAACCCATGTTCGTGGAACAAGCGCTAAATCAGCCAAAAAAGGCGATACGTTGAATACATCAAAAAGATTTCTATGTTTTAAATGCAATCGGGACTTTAGCACTAAAACAAATCTTACCCGACATATGGCAACACACGAAGGCAACCGACCATTTCAGTGCAATGTGTGTAACAAAAGCTTCACCCAGAATGTATCCTTAAAGcaacacatgtacacacacactgGGGAGAAACCATATCAATGTGAGGTGTGCCATAGAGGTTTTACACAATGTAAAAGTCTAGTATTTCATATACGCCGACATACTGGCGATAAACCATTTCCATGCGAAAAATGCGGTGCACTTTTCCGGCAAAAAGATGGACTTAAGaCCCATATTCTTAAACGACATACAATCAAGTCGCAACATGGAAATATGGAGCTAACAACATGCGCCATATGCAAAGAAGTGTTTGCTGATAAAATACTGCTTCAGGAGCATATGAAAAAACACTTGAACGACTATGTGCGTGTTGACTCTGCCATGTCATGCGCGAACCGTGAAGGAACAACAGAAGAAAATTCAGACATGCTACTCGAATATATAGATGATGATCCTCTACATGATAAAGCAAATGGGATTACTGGCGAAAGCATATCAGAGAGCACTGAGGATATTGGCTCGTCAGCGCATGTCGTAGACTTAATGACGACGTCCGCTTTGGAACCGAGTCGTGCAAAGAAATTCCAGTGccgaaaatgttttaaatgctTTGCAATTAAGAAAAATTTGCTTCGTCATTTGACYACACATGACCTATCCGTTGAGTCTGATTTCGTTTGTAAAATATGCGAACTTTGCTTCGCAACCAGTGAGGACTTAAAAGCGCATACAATAAAAGAGCACACTAACTCTAATGAATGCTTCCAGTGCGAACTGTGTCAATCCGTATTTTCTAACGTTGCAGAGCTAAAAAAACATATGGTTTTGCATAATACCAAAACAGATAAGACACATGGAGTCGTTATGTTGCGAAAAGCTTTAAAACTTACTAATTTAGTACGAcaaacattttgtggcgaatttttaataaattattccaattcaatattcatttatatggaaaatatggaAGTATGCCGTATTTGTGGTGGAGCTGAAAGACTCAAGTGTTTTCAAGGCGATGAGCAATTGACGGAACTTCTAAGAGTTTGCGCGAACATtacaATAGAAGAAAATGACTTTTTACCAAAGCATATATGCGAGCAATGTGAGAATGGTTTGCGTTTTTCTTACCAGTTGCGAAAGCAAAGTGAACAAACCGAAAAGCGGTTGCGGCAGGAGATGCAGACACAAACCCATAGTACGACAATTAATATTCTAGATGAATTTGATCCGAATGATGTGAATGAATTTGATCAAACGGCTGATGTAATAAGACACAAAAGTCTGATTTCAGAAATAAACATCAATATTTCGACAACTACTCAGGAATCGAATTGCGTACTTATTGAAGAAAATCACACACAGGAGATAATTGAGTCCACAAGCCTATGTATGGAAATAAAAGAGCACCAGAGCATTGTAGAAATATTGGATGATGATAATTTACCTGAATTATCAAGCGAAGAGCGTCTCAGGTTAGATCTACAGAAACGCGGTGTCGAAATGCAAAAGCGCTTGATGCCGATAGAAAACGTACAGTTAAATGAGATATCTCAGGGACATGAGGTAATTGCAGAAAAGCGAATTCAACTGGATTTGGATATGCACGCAGATGTATTTAACGATATGGAATTACCGGCAGACaaatgtttagaaattttaaataatgaatttaacaaaGATAATGACGAGGATGATATTATTGAAGTAATTGACGATGATTCAATGCCAGGATTAGCGCATGAAGAATTTTCTACCAAACAAGTATGCCAAACACTGAATGCATGCGATTATCAAAATGAGAACTTTGTAGAAGAGATATTGTCTTCAGACGAAGAAAGTCAGTGCAACCAAACTGATGTAGTATATGAAGAAAACTCTGACGGCGTTGACGACTCCGACAATATTGATGATTGTGAAATGCATTTTATGAAGGAAGAAAGTAGTGATTTCCCTGGTAATGAGTGCACTGAAAATGAGTCGGTCACAACACAAGAAATTGAGAAGGACGAAACGACAATAGGTGAGGCTGGTGAAACACCTAGTAATTCAAGTGCAGTGGAATCTaTAAGCGTATACACCTGCCCGACATGCGACGTACAACTACCTACATGGGCAGATTATTGTGAGCATATCAAAACACATGGTGATAAAAGGTTTCTCTGCAAGATATGCAATATATGGTTTCCACTACGTAGCAGATTGGAAAAGCATTTACTGTCTCATGAAgacaaacaagaaaaaccaGAATGTCCGCACTGTGGACGTACATATCAGAGCCGTTATAATTTAAGACGGCACATACTTGGCATGCATGATAATGTTGCTCACATATGCGTCATTTGTGGTAAAGCGTTTCTCCGGTCTGACGTGCTCCAAGTTCACTTGGCCACACATTTGGAGGATGAGGAGCTTCGATGCGAGCACTGTTCGAGAtgTTTTAGTACAAAGAGTACATtgaaaaatcatatgaaaaCTCATCTAAAGTCCTCAACTGTGAAAGAAGGTGAAAAAGTCGCGAAGAGTGATGAAAAAAACACCACTGGAAAAAAGGTTTACTGCTGCCACTACTGCGGCAAAGAGTCCAAACACCATTTCACCCACAAAATGCATATGCGCATACATACGCAAGAGCGGCCGCATAAATGTGACGCTTGTGATAAGGCTTTCCGCACAATGGCCGCGCTGATTACACACCAACGCATACACGAGGATGTACGACCATATCAGTGTGAACACTGTTTGCTCTCCTTTCGACAGCAAGGCCATCTAAAGGAACATCGTATGATACACGAAGGCATTACACCGCATAAGTGTAGTATTTGCCAATTATCTTTTACTAAAAAGAGCAATATGCTTGTGCATATGCGTATACACTCAGGTGAAAATCCCTACAAGTGCGTTATATGTGATAAGCAATTCAAAAAAGCCGCACTTTTGCGAAAACACGAAATCGAAGTGCATAACAAAAACCCAACTGATGAGGAAGTGGGCGATAGCCCGTTTATTGATTTAGCAGAAGAGTTGGTGTGCAGCGATAGCAACAGTCTGGAGGTAATAGAAACGGAAAATGCCTCGTCCATTGAAAGTAGTGCCATAAGCAATGTCGGAGATGTTCAGCAGGGCTTCGAAGAAATGCCCGAAGTAATTAGAAATGCAGTTTTagaacaaaattattgtaataatcCAGCCAATAATGATTTTGAGGCAGTGGACAGTGGTGTGGTATTGGTGGTGGATGATAACGCGAAATTTAACAGTTTATTCATTATGGATGATTAA
Protein Sequence: MNFRVNINICRVCMKSDDGVSLLNDEELCEKFVFTTHLKLTESDDMPSIICSKCLKRLRVAYDFVKLAHDSEKNLKTFLEKISKDFQLVTNNAIEKSNNNEDEDDLLSNILDEENADKKTEASTQLSVQNDESTISASEMSSGVKTNNRKTAIGKTENSIEQITLKTTRSSLGPLEDPSEDISKDIHKNKMKLNLKKGNVDKEINTFQSFESDIQVEIEENLDDITKCEVETPKEHSPEHEIQILEYTDEESQTELEILEENLQPSDDTRSSLSTEEPQPQSSGGFLKEYQAMLDEDGEFLGENSSKHDKTTAAKELDYFDDSEELLDDHDIEMKSMVEDNLDEEQSVDTTSQLQTEVAQKEIKSKTRKYHAKTHVRGTSAKSAKKGDTLNTSKRFLCFKCNRDFSTKTNLTRHMATHEGNRPFQCNVCNKSFTQNVSLKQHMYTHTGEKPYQCEVCHRGFTQCKSLVFHIRRHTGDKPFPCEKCGALFRQKDGLKTHILKRHTIKSQHGNMELTTCAICKEVFADKILLQEHMKKHLNDYVRVDSAMSCANREGTTEENSDMLLEYIDDDPLHDKANGITGESISESTEDIGSSAHVVDLMTTSALEPSRAKKFQCRKCFKCFAIKKNLLRHLTTHDLSVESDFVCKICELCFATSEDLKAHTIKEHTNSNECFQCELCQSVFSNVAELKKHMVLHNTKTDKTHGVVMLRKALKLTNLVRQTFCGEFLINYSNSIFIYMENMEVCRICGGAERLKCFQGDEQLTELLRVCANITIEENDFLPKHICEQCENGLRFSYQLRKQSEQTEKRLRQEMQTQTHSTTINILDEFDPNDVNEFDQTADVIRHKSLISEININISTTTQESNCVLIEENHTQEIIESTSLCMEIKEHQSIVEILDDDNLPELSSEERLRLDLQKRGVEMQKRLMPIENVQLNEISQGHEVIAEKRIQLDLDMHADVFNDMELPADKCLEILNNEFNKDNDEDDIIEVIDDDSMPGLAHEEFSTKQVCQTLNACDYQNENFVEEILSSDEESQCNQTDVVYEENSDGVDDSDNIDDCEMHFMKEESSDFPGNECTENESVTTQEIEKDETTIGEAGETPSNSSAVESISVYTCPTCDVQLPTWADYCEHIKTHGDKRFLCKICNIWFPLRSRLEKHLLSHEDKQEKPECPHCGRTYQSRYNLRRHILGMHDNVAHICVICGKAFLRSDVLQVHLATHLEDEELRCEHCSRCFSTKSTLKNHMKTHLKSSTVKEGEKVAKSDEKNTTGKKVYCCHYCGKESKHHFTHKMHMRIHTQERPHKCDACDKAFRTMAALITHQRIHEDVRPYQCEHCLLSFRQQGHLKEHRMIHEGITPHKCSICQLSFTKKSNMLVHMRIHSGENPYKCVICDKQFKKAALLRKHEIEVHNKNPTDEEVGDSPFIDLAEELVCSDSNSLEVIETENASSIESSAISNVGDVQQGFEEMPEVIRNAVLEQNYCNNPANNDFEAVDSGVVLVVDDNAKFNSLFIMDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00190803;
90% Identity: iTF_00193724;
80% Identity: -