Basic Information

Insect: Bactrocera dorsalis
Gene Symbol: -
Assembly: GCA_000789215.2
Location: NW:297611-304659[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.9e-06 0.00033 20.4 2.8 1 23 394 416 394 416 0.95

2 18 2.2e-07 1.3e-05 24.9 2.3 1 23 422 444 422 444 0.99

3 18 0.0055 0.31 11.1 5.3 1 23 450 472 450 472 0.99

4 18 7.2e-05 0.0041 17.0 0.4 1 23 478 501 478 501 0.97

5 18 6.1e-05 0.0034 17.2 0.2 2 23 514 535 513 535 0.97

6 18 0.00098 0.056 13.4 5.8 1 23 613 635 613 635 0.98

7 18 6.9e-05 0.0039 17.1 0.7 1 23 643 666 643 666 0.94

8 18 0.00051 0.029 14.3 0.2 1 23 673 695 673 695 0.97

9 18 8.4 4.8e+02 1.1 0.4 1 18 790 807 790 807 0.89

10 18 0.0042 0.24 11.5 1.9 1 23 1113 1135 1113 1135 0.98

11 18 0.55 31 4.8 1.7 1 20 1140 1159 1140 1162 0.94

12 18 0.00011 0.0064 16.4 2.6 2 23 1170 1192 1170 1192 0.94

13 18 2.9e-06 0.00016 21.4 0.2 1 23 1197 1219 1197 1219 0.96

14 18 2.3e-05 0.0013 18.6 8.6 2 23 1226 1247 1225 1247 0.97

15 18 1.3e-06 7.4e-05 22.5 0.7 1 23 1295 1317 1295 1317 0.98

16 18 0.00013 0.0072 16.2 4.2 1 23 1323 1345 1323 1345 0.98

17 18 3.5e-06 0.0002 21.1 2.8 1 23 1351 1373 1351 1373 0.98

18 18 6e-05 0.0034 17.3 0.2 1 23 1379 1402 1379 1402 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.9e-06	0.00033	20.4	2.8	1	23	394	416	394	416	0.95
2	18	2.2e-07	1.3e-05	24.9	2.3	1	23	422	444	422	444	0.99
3	18	0.0055	0.31	11.1	5.3	1	23	450	472	450	472	0.99
4	18	7.2e-05	0.0041	17.0	0.4	1	23	478	501	478	501	0.97
5	18	6.1e-05	0.0034	17.2	0.2	2	23	514	535	513	535	0.97
6	18	0.00098	0.056	13.4	5.8	1	23	613	635	613	635	0.98
7	18	6.9e-05	0.0039	17.1	0.7	1	23	643	666	643	666	0.94
8	18	0.00051	0.029	14.3	0.2	1	23	673	695	673	695	0.97
9	18	8.4	4.8e+02	1.1	0.4	1	18	790	807	790	807	0.89
10	18	0.0042	0.24	11.5	1.9	1	23	1113	1135	1113	1135	0.98
11	18	0.55	31	4.8	1.7	1	20	1140	1159	1140	1162	0.94
12	18	0.00011	0.0064	16.4	2.6	2	23	1170	1192	1170	1192	0.94
13	18	2.9e-06	0.00016	21.4	0.2	1	23	1197	1219	1197	1219	0.96
14	18	2.3e-05	0.0013	18.6	8.6	2	23	1226	1247	1225	1247	0.97
15	18	1.3e-06	7.4e-05	22.5	0.7	1	23	1295	1317	1295	1317	0.98
16	18	0.00013	0.0072	16.2	4.2	1	23	1323	1345	1323	1345	0.98
17	18	3.5e-06	0.0002	21.1	2.8	1	23	1351	1373	1351	1373	0.98
18	18	6e-05	0.0034	17.3	0.2	1	23	1379	1402	1379	1402	0.92

Sequence Information

Coding Sequence: atgaattttcgcgtcaatataaatatatgccgTGTCTGCATGAAATCGGACGATGGCGTATCACTTTTGAATGATGAAGAATTGCGCAAAAAGTTTGTGTTTACAACGCATTTgaagCTCACTGAAAGTGATGATATGCCCTCGTTAATTTGTTCTAAATGCTTAAAACGACTGCGAGTAGCCTATGATTTCGTAAAGTCCGCACACGAttcggaaaaaaatttgaaggcATTTCTCGAAAAGATTAGTAAAGACTTTCAAGTAGTAACAAATAACGCtattataaacacaaataacagCGAAGATGAGGATGATCTATTGTCAAACATTCTTGATGAAGAGAATGCTGACAAGAAAACAGAAGCTTCAACACAAATGTCAGTACAAAAAGATGAAAGCGCAATTTCTGCCTCCGAGGTGTCTAGTAGCGTTAAAAGTAATAACAGAAAAACTGCTATTGGAAAAACGGAAAACAGTGTCGATCAAATAACACTGAAGACCACAAGATCTAACTTAGGTGATACATCGGAGGATATATCAAAAgatatacacaaaaacaaaatgaaattaaatgttaagAAAGGTAGTGtagataaagaaataaaaactttccaaTCTTTTGAGTCTGATATTCAAGTAGAAATAGAAGAAAACCTGGATGATATTACAAAGTGTGAAGTTGAAACACCAAAAGAACATTCACCGGAACACGAAATACAAATACTTGAATACACCGATGAAGAGTCTCAAACCGAATTAGAAATATTGGAAGAAAATCTTCAACCAAGTGACGATACTAGAAGCAGTCTTGGCACAGAGGAGCCGCAACCACAAAGTAGCGGGGGATTTCTTAAGGAATATCAAGCAATGCTTGATGAAGATGGCGATTTTTTGGAAGATAATAGTTCCATAAACGATAAAACTACTACAGCTAAAGAATTGAATTACTTTGATGATAGTGAAGAACTATTGGATGAACATGATGATATCGAAATGAAATCTATGGTCGAAGATAACCTAGATGAAGAACAAGCTGTTGACACCTCATCACAGTTGCAAACTGAAGTCGctgaaaaggaaattaaaagtaaaacacgTAAATACCAGGCGAAGACACATGTTCGTGGTGCTGGCGCTAAATCAGCCAGAAAAGGCGATACGTTGAATACTTCAAAAAGATTTCTATGTTTTAAATGTAATCGGGACTTTAGCACTAAAACAAATCTTACCAGACATATGGCAACACACGAAGGCAACCGACCATTTCAGTGCAATGTGTGTAACAAAAGCTTCACCCAGAATGTATCCTTAAAGcaacacatgtacacacacactgGTGAGAAACCATATCAATGCGAGGTGTGCCATAGAGGTTTTACACAATGTAAAAGTCTAGTATTTCATATACGCCGACATACTGGCGATAAACCATTTCCATGCGAAAAATGCGGTGCACTCTTCCGGCAAAAAGATGGACTTAAGACCCACATTCTTAAACGACATACAATCAAGTCGCAACATGGTAATATGGAGTTAACAACATGCGCCATATGCAAAGAAGTGTTTGCTGATAAAATTCTGCTTCAGGAGCATATGAAAAAACACTTAAACGACTATGTGCGTGTCGACTCTGCCATGTCATGCGCGAACCGTGAAGGAACAACCGAAGAAAATTCAGACATGCTACTCGAATATATAGATGATGATCCTCTACACGACAAAGCAAGTAACAATATTGGCGAAAGCACATCAGAGAGCGCTGATGATATAGGCTCTTCGGCACATGTCGTTGACTTAATGACGACGTCCGCTTTGGAACCGAGTCGTGCAAAGAAATTCCAGTGccgaaaatgttttaaatgctTTGCAATTAAGAAAAATTTGCTTCGTCATTTGACCACACATGAGCTATCCGTTGAGACTGATTTCGTTTGTAAAATATGCGAACTTTGCTTCGCAACCAGTGAGGACTTAAAAGCGCATACAGTAAAAGAGCACACTAACTCTACCGAACCCTTCCAATGCGAACTGTGTGAATCCGCGTTTTCTAACGTTGTTGAGCTAAAGAAACATATGGATTTGCATAATACCAAAACAGATAAGACACATGGAGTCGTTATGTTgcgaaaaactttaaaacttacTAATTTAGTACGATATTGGATTTTCTcaagtaaacaaacattttgtggcaaatttttaataaattattccaattcaattttcatttataaagaaaatatggaaGTATGTCGTATTTGTGGCGGAGCTGAAAAACTCAAGTGCTTTCAAGGCGATGAGCAATTGACGGAGCTGCTAAGAGTTTGCGCGAACAttgcaatagAAGAAAATGACTTTTTACCACAGCATATATGCGAGCATTGTGAGAATGGTTTGCGTTTTTCTTACCATTTGCGAAAGCAAAGTGAACAAACCGAAAAGCGGTTGCGGCAGGAGATGCAGACACAAACCAATAGTACGACAATTAATATTCTAGATGAATTTGATGCGAATGATGTGAATGCATTTGATCAAACGGCTGATGTAATAAGGCACAAAAGTCTAATTTcagaaataaacataaatatttcgacCACTACTCAGGAATCGAATTGCGTACTTATCGAAGAAAATCACACACAGGAGATAATTGAGTCCACAAGCCTATGTATGGAAATAAAAGAGCACCAGAGCATTGTAGAAATATTAGATGAAGACAATTTACCTGAATTAACAGCCGAAGAGCGTCTCAGGTTAGATTTGCAGAAGCGCGGTGTCGATATGCAAAAGCGCTTGATGCCGATAGAAAACGTACCGTTAAATGAGATAGGACATGAGGTAATTGCAGAAAAGCGAATTCAACTGGATTTGGATACGCACGCAGATGTATTTAGCGATATGGAATTGCCGGCAGAGAAATGTTTAGagattttaaataatgaatttaacgATGAGGATGATATTATTGAAGTAATTGATGATGATTCAATGCCAGGGTTAGCGGACGAAGAATTATCTACCAAACAAGTATGCCAAACACTAAATGCATGCGAATATCAAGGTGAGGACTTTGTAGAAGAGATATTGTCTTCAGACGAAGAAAGTCAGTGCTACCAAACTGTAGTATATGAAGAAAACTCTGATGGTGTTGACGACACCGAGAATATTGAAGATTGTGAAATGCATTTTATGAAGGAAGAAAGTAGTGATTTCCCTGGTAATGAGTGCACTGAAAATGAGTCGGTCACAACACAAGAAATTGAGAAGGACGAAACGACAATAGGTGCCGACAGTGAAAAACCTAGTAATGCAAGTGCAGAGGAACCTatAAGCGGCCACACCTGCCCGACATGCGACTTACAACTGCCTACATGGACAGAATATTGTGAGCATATCAAAACACATGGTGATAAAAGGTTTGTCTGCAAGATATGCAATACATGGTTTCCACTACGTAGCAGATTGGAAAAGCATTTACTGTGTCatgaagaaaaacaagaaaaaccggAATGTCCGCACTGTAGACGTACATATCAGAGCCGTTATAATTTAAAACGGCACATACAAGACATGCATAATAATGATGCTCACATATGCGTCCTTTGTGGTAAAGCGTTTATCCAGTCTGATGAGCTCAAAGTTCACATGGCCACACATTTAGAGGAGGAGGAACTTCGATGCGAGCACTGTTCGAGATgTTTCAGTAGAAAGAGTACCTTTACAAATCATATGAAAACTCATCTAAAGTCCTCAACTGTAAAAAAGAGTGATGCTAAAAACACCACAGGAAAAAAAGTGTACTGCTGCCACTACTGCGGCAAAGAGTCCAAACATCATTTCACACACAAAATgcatatgcgcatacatacgCAAGAGCGGCCGCATAAATGTGACGATTGTGATAAGGCTTTCCGCACAATGGCTGCGCTGATTACACACCAACGCATACACGACGATGTACGGCCATATCAGTGTGAACACTGTTTGCTCTCCTTTCGACAGCGAGCCCATCTCAACTCGCATCGCATGATACACGATGGCATTACACCGCATAAGTGTAGTATTTGCCAATGGTCTTTTACTAAAAAGAGCAATATGCTTCTGCATATGCGTATACACTCAGGTGAAAATCCCTACAAGTGTGTTATATGCGATAAGCAATTCAAAAAAGCCGCACTTTTGCGAAAACATGAAATCGAAGTGCATAATAAAAACTCAACTGAGGAGCAATTGCGCAAGAGCCCGTTTATTGATTTAGCAGAAGAGTTGGTGTGCAGCGATAGCAACAGTCTGGAGGTAATAGAAACGGAAAATGCCTCGTCCATTGAAAGCAGTGTCATAAGCAATGTCGAAGATGTTCAGCAGGGCTACGAAGAAATGCCCGAAGTAATTAGAAATGCAGTTTTAGAACAAAATAATCCTGCCAATAATGATTTTGAGGCAGTGGACAGTGgcgtggtgttggtggtggatGATAACGCGAAATTTAATAGCTTATTTATTATGGATGATTAA
Protein Sequence: MNFRVNINICRVCMKSDDGVSLLNDEELRKKFVFTTHLKLTESDDMPSLICSKCLKRLRVAYDFVKSAHDSEKNLKAFLEKISKDFQVVTNNAIINTNNSEDEDDLLSNILDEENADKKTEASTQMSVQKDESAISASEVSSSVKSNNRKTAIGKTENSVDQITLKTTRSNLGDTSEDISKDIHKNKMKLNVKKGSVDKEIKTFQSFESDIQVEIEENLDDITKCEVETPKEHSPEHEIQILEYTDEESQTELEILEENLQPSDDTRSSLGTEEPQPQSSGGFLKEYQAMLDEDGDFLEDNSSINDKTTTAKELNYFDDSEELLDEHDDIEMKSMVEDNLDEEQAVDTSSQLQTEVAEKEIKSKTRKYQAKTHVRGAGAKSARKGDTLNTSKRFLCFKCNRDFSTKTNLTRHMATHEGNRPFQCNVCNKSFTQNVSLKQHMYTHTGEKPYQCEVCHRGFTQCKSLVFHIRRHTGDKPFPCEKCGALFRQKDGLKTHILKRHTIKSQHGNMELTTCAICKEVFADKILLQEHMKKHLNDYVRVDSAMSCANREGTTEENSDMLLEYIDDDPLHDKASNNIGESTSESADDIGSSAHVVDLMTTSALEPSRAKKFQCRKCFKCFAIKKNLLRHLTTHELSVETDFVCKICELCFATSEDLKAHTVKEHTNSTEPFQCELCESAFSNVVELKKHMDLHNTKTDKTHGVVMLRKTLKLTNLVRYWIFSSKQTFCGKFLINYSNSIFIYKENMEVCRICGGAEKLKCFQGDEQLTELLRVCANIAIEENDFLPQHICEHCENGLRFSYHLRKQSEQTEKRLRQEMQTQTNSTTINILDEFDANDVNAFDQTADVIRHKSLISEININISTTTQESNCVLIEENHTQEIIESTSLCMEIKEHQSIVEILDEDNLPELTAEERLRLDLQKRGVDMQKRLMPIENVPLNEIGHEVIAEKRIQLDLDTHADVFSDMELPAEKCLEILNNEFNDEDDIIEVIDDDSMPGLADEELSTKQVCQTLNACEYQGEDFVEEILSSDEESQCYQTVVYEENSDGVDDTENIEDCEMHFMKEESSDFPGNECTENESVTTQEIEKDETTIGADSEKPSNASAEEPISGHTCPTCDLQLPTWTEYCEHIKTHGDKRFVCKICNTWFPLRSRLEKHLLCHEEKQEKPECPHCRRTYQSRYNLKRHIQDMHNNDAHICVLCGKAFIQSDELKVHMATHLEEEELRCEHCSRCFSRKSTFTNHMKTHLKSSTVKKSDAKNTTGKKVYCCHYCGKESKHHFTHKMHMRIHTQERPHKCDDCDKAFRTMAALITHQRIHDDVRPYQCEHCLLSFRQRAHLNSHRMIHDGITPHKCSICQWSFTKKSNMLLHMRIHSGENPYKCVICDKQFKKAALLRKHEIEVHNKNSTEEQLRKSPFIDLAEELVCSDSNSLEVIETENASSIESSVISNVEDVQQGYEEMPEVIRNAVLEQNNPANNDFEAVDSGVVLVVDDNAKFNSLFIMDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00193724; iTF_00191493;
90% Identity: iTF_00193724;
80% Identity: -