Basic Information

Insect: Bactrocera latifrons
Gene Symbol: -
Assembly: GCA_001853355.1
Location: NW:57131-78523[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.5e-05 0.0019 18.0 1.7 1 23 494 516 494 516 0.97

2 18 1.1e-05 0.0006 19.6 0.4 1 23 522 544 522 544 0.97

3 18 0.00091 0.05 13.6 0.5 1 23 550 572 550 572 0.95

4 18 1.8e-05 0.00098 19.0 3.1 1 23 578 600 578 600 0.97

5 18 4e-05 0.0022 17.8 4.7 1 23 606 628 606 628 0.99

6 18 7.3e-05 0.0041 17.0 5.7 1 23 634 656 634 656 0.97

7 18 3.6e-07 2e-05 24.3 4.3 1 23 662 684 662 684 0.98

8 18 1.3e-07 7.1e-06 25.7 2.4 1 23 690 712 690 712 0.97

9 18 7.4e-05 0.0042 17.0 6.7 1 23 718 740 718 740 0.97

10 18 2.1e-05 0.0012 18.7 6.5 1 23 746 768 746 768 0.98

11 18 3.6e-06 0.0002 21.1 4.5 1 23 774 796 774 796 0.98

12 18 1.3e-05 0.00075 19.3 7.1 1 23 802 824 802 824 0.98

13 18 6.8e-06 0.00038 20.3 7.6 1 23 830 852 830 852 0.97

14 18 7.6e-07 4.3e-05 23.2 7.7 1 23 858 880 858 880 0.98

15 18 0.00024 0.013 15.4 9.5 1 23 886 909 886 909 0.95

16 18 0.0002 0.011 15.6 0.5 1 23 915 937 915 937 0.97

17 18 0.00029 0.016 15.1 4.5 1 23 947 969 947 969 0.98

18 18 1.1e-05 0.00059 19.7 1.6 1 23 975 998 975 998 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.5e-05	0.0019	18.0	1.7	1	23	494	516	494	516	0.97
2	18	1.1e-05	0.0006	19.6	0.4	1	23	522	544	522	544	0.97
3	18	0.00091	0.05	13.6	0.5	1	23	550	572	550	572	0.95
4	18	1.8e-05	0.00098	19.0	3.1	1	23	578	600	578	600	0.97
5	18	4e-05	0.0022	17.8	4.7	1	23	606	628	606	628	0.99
6	18	7.3e-05	0.0041	17.0	5.7	1	23	634	656	634	656	0.97
7	18	3.6e-07	2e-05	24.3	4.3	1	23	662	684	662	684	0.98
8	18	1.3e-07	7.1e-06	25.7	2.4	1	23	690	712	690	712	0.97
9	18	7.4e-05	0.0042	17.0	6.7	1	23	718	740	718	740	0.97
10	18	2.1e-05	0.0012	18.7	6.5	1	23	746	768	746	768	0.98
11	18	3.6e-06	0.0002	21.1	4.5	1	23	774	796	774	796	0.98
12	18	1.3e-05	0.00075	19.3	7.1	1	23	802	824	802	824	0.98
13	18	6.8e-06	0.00038	20.3	7.6	1	23	830	852	830	852	0.97
14	18	7.6e-07	4.3e-05	23.2	7.7	1	23	858	880	858	880	0.98
15	18	0.00024	0.013	15.4	9.5	1	23	886	909	886	909	0.95
16	18	0.0002	0.011	15.6	0.5	1	23	915	937	915	937	0.97
17	18	0.00029	0.016	15.1	4.5	1	23	947	969	947	969	0.98
18	18	1.1e-05	0.00059	19.7	1.6	1	23	975	998	975	998	0.96

Sequence Information

Coding Sequence: ATGTTGCAGCCACAGCAAATCCGAAGACAAcaaacagcacaacaacaacaacaattgcaactgCAGCAGACGCAGCAACAGATTAATTCAATGTCGTTGAGCAGTGTAAGTGGTGGAGGTGGTGGCGGGGGCTCCACTGCCATAGTGACAACCCCCTCCACTATAGCCACAGCAGGCGGCATGGTTGGTGTTGCCGGTAATACTTTAATACCACTGACAGCCCCAGTCCAACAGCAGCCAGTTTCAATAGCCACTTTGACGGCGGCGACAATTGCGGCCGTTGCAGCTGGAGGTGGCACACCAACCACTCTAACCGCGACGCCAGTAACTGTCAGTGGTCTTAGCATAAGTGTTACGAATCCTGCAACTGTCGTTACTGGCAATATTGCTGAYACAAAGATAGGCCAAACGGCATTgcaacagcaccaacaacaaacgCATCAGCAGCAACAAAYAATAAGTTCAACTGGAGACACATTAGCAACGGCATCAACCACAACTGCACTATTGCCAAATGCACCAAACttgagCAAATATTGGGTCGTATCAAATGGTCAAGCTCTGCCCTATAATATTTTGCCAAATGGAACAATAATCACACAACATCAGCGGCAGCAAACGTCGGACCAGGATACACATTCACAGCAACAGGTTcaactgcagcagcagcagcaacaacaacagcaacagcaaactAATGCATTACAAATTCACgctgcAGTAAATGCAAGCGATGACAatcgacagcaacaacagcagcatgtTTCGCAGCAGCAACATGTAACTGCCGCTGTGCAGCAGTCACAGCAAGCTCAACAACAGCACCAACagccccaacaacaacaactcctacaacgagaaaatattaaagaggAGAAACCATTTTTAGATAACGGGAAGTTAAATCAATCCTTAGTGATGCAACACGTAGGCGCAACAGCATCGTCCGCGCCGACGACATCCGGTGCTACTACCATAACCCTAGGTGCGCCGAAAACCGAAATTAAAGATGATGTTGGAATGGGCAAACCGCCTATTGAAATGTATAAAGTTAACATTGAAGACTTTTCCCAGCTTTTTACCTATCATGaagtttttggtaaaattcACGGTGATGTCATGAATCAGGCCGCACATGCAGTACCCAATCctgcaccaccaccaccgcatGGTAATGCGAGCAACAATGCTGCAGTTGCGGCCGTTGTGGCCAGCGCTAATGCTGCCGCtgtcgctgctgctgcggcCGCGGYAGCCGCAAATACAACAAGCGGTGTTGTGGCCCCCACAACAACTACCAATCTAACGACGGCAATCAGCACTAGTGGCACTACCACTGCCCCCGCAACGGCTGTAACAGCAACCCCAACTGTGACTGGGGAGCTATTGATGCCGAAAATGGAGGGCGGCCTACCGGTTGTGGATCAGACAACAACCATCGCGCTTGCTCCTGATGGCACACCTATCGCTACTGGTACACATGTCTGTGACATTTGTGGCAAAATCTTCCAATTTCGCTATCAGTTGATCGTACATCGACGTTATCATAGTGAACGGAAACCATTCAATTGCCAGGTTTGTGGACAGGGCTTCACAACTTCACAAGATTTAACGCGCCATGGGAAGATTCACATCGGTGGACCAATGTTTACGTGTATCGTTTGTTTCAATGTATTCGCTAACAATGCCAGTTTGGAACGCCATATGAAACGACATTCAACCGATAAACCATTTGCATGTACGATCTGTCAGAAGACATTTGCACGCAAGGAACATTTGGACAACCACTTTCGTTCGCATACGGGCGAGACCCCTTTCCGGTGCCAATATTGYGCAAAGACATTCACACGGAAGGAGCACATGGTGAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGgTCAAACACCTCACCAGTGCGATGTATGTGGCAAGAAGTATACACGCAAAGAGCACCTAGCTAATCATATGCGTTCACACACTAATGACACACCATTTAGATGTGAGATATGCGGCAAAAGTTTCAGTCGCAAGGAGCACTTTACCAATCACATTCTCTGGCATACAGGCGAAACACCTCATCGTTGCGATTTCTGCTCGAAAACATTTACACGCAAGGAACATTTGCTAAATCATGTACGTCAACATACTGGCGAATCGCCTCATCGTTGCACATATTGCTTGAAAACGTTCACACGCAAGGAACACCTAGTAAATCACATACGTCAGCATACTGGTGAAACACCGTTCAAATGCACCTATTGCACGAAGGCATTTACGCGCAAAGATCATATGGTGAATCATATTAGGCAACATACCGGAGAATCGCCGCACAAGTGCACATACTGCACAAAAACATTCACACGAAAGGAGCATCTGGTAAATCATGTGCGTCARCATACTGGTGAATCTCCTCATCGTTGCAGTTACTGCAAGAAGACTTTTACACGCAAGGAGCATTTGACGAATCATGTACGTTTGCATACTGGCGATTCACCGCATAAATGTGAATATTGTCAAAAGACATTTACGCGTAAAGAGCATCTAAACAATCATATGCGCCAGCACTCCAGTGACAATCCACATTGTTGTAATGTGTGCAACAAGCCATTCACTCGTAAAGAGCATCTCATCAATCATATGTCACGTTGCCACACCGGTGATCGTCCTTTCGCTTGTGAGACTTGTGGTAAGTCATTTCCACTCAAAGGAAATCTGCTGTTCCACCAACGTAGTCACACTAAAGGACAGGAATGTGAACGTCCGTTTTCATGTGAGAAATGTCCCAAGACCTTTATATGCAARGGTCATCTTGTCTCGCATATGCGTTCGCATTCGGGCGAGAAACCGCACGCCTGCACATTGTGCAGCAAAGCTTTTGTTGAGCGTGGAAATTTGAAGCGTCACATGAAGATGAACCATCCCGATGCGGTAATGCCTCCTCCGCCGCAGCCTCATCCGCAAATTCCAGCTGGTATACTGACGTCGGTCAAAGAGGAAATAAAACCAATATTTCTTCCTCATCAAACACCGACCATGCACACCATCCAACAAATAACATCGGGTGCAGCTGCGGCAAATGCCGTGCAGTTAGCTCCTAGTCTAGTGCCGTTGGTTACCTCAACGATAACTTCACATAATAATCAGaagccgcagcagcagcaacagcaacaacagcagcaacaacaacaacagcaacagcaacaagcacatcaacagcaccaacaacaggtgcaacagcagcagcaacaacatcagcagcagcagcaacagcagcaacaacaattactacAATTATCCatacaacatcaacaacagcaggAGCAACATCGccaacaccagcaacagcaacaggcGCATCATCAACAAACACAGGcgcaagcacaacaacaagctCATGCACCACAACCTCAACCGCAACAACCGCCACCCGTGCCTATCGCACTCATACAAACCGATCCGGGCGTCTTGGCGCGCGCCGCCATGCAACTGCAGCACCTGCCAGCGAATGTCGAGCAACATCCGGTGGTTTACTAA
Protein Sequence: MLQPQQIRRQQTAQQQQQLQLQQTQQQINSMSLSSVSGGGGGGGSTAIVTTPSTIATAGGMVGVAGNTLIPLTAPVQQQPVSIATLTAATIAAVAAGGGTPTTLTATPVTVSGLSISVTNPATVVTGNIADTKIGQTALQQHQQQTHQQQQXISSTGDTLATASTTTALLPNAPNLSKYWVVSNGQALPYNILPNGTIITQHQRQQTSDQDTHSQQQVQLQQQQQQQQQQQTNALQIHAAVNASDDNRQQQQQHVSQQQHVTAAVQQSQQAQQQHQQPQQQQLLQRENIKEEKPFLDNGKLNQSLVMQHVGATASSAPTTSGATTITLGAPKTEIKDDVGMGKPPIEMYKVNIEDFSQLFTYHEVFGKIHGDVMNQAAHAVPNPAPPPPHGNASNNAAVAAVVASANAAAVAAAAAAXAANTTSGVVAPTTTTNLTTAISTSGTTTAPATAVTATPTVTGELLMPKMEGGLPVVDQTTTIALAPDGTPIATGTHVCDICGKIFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAVMPPPPQPHPQIPAGILTSVKEEIKPIFLPHQTPTMHTIQQITSGAAAANAVQLAPSLVPLVTSTITSHNNQKPQQQQQQQQQQQQQQQQQQAHQQHQQQVQQQQQQHQQQQQQQQQQLLQLSIQHQQQQEQHRQHQQQQQAHHQQTQAQAQQQAHAPQPQPQQPPPVPIALIQTDPGVLARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358224;
90% Identity: iTF_00193723;
80% Identity: -