Bcor012631.1
Basic Information
- Insect
- Bactrocera correcta
- Gene Symbol
- PAXBP1
- Assembly
- GCA_027475135.1
- Location
- CM050327.1:38021138-38026210[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.54 8.1e+03 -3.2 0.1 144 175 430 461 407 476 0.53 2 2 2.8e-29 4.2e-25 89.6 0.7 4 271 646 852 643 855 0.93
Sequence Information
- Coding Sequence
- ATGTCGTTATTTCGTAAGCCAAAGAAAATACAGAGGCGTGTTTTTTCAAGCGCTCTAGACGAAGAGGATGAAAATGCGGCGGATGATATGGAAGTGGAGATCGATGGGGAGCAATCTTTGCAAAATAACAAAAAAAGTAAAGACGGCGGCCCAAAAAAATCTGGCAATAAAGCAGATAAAATCGAAGAACCTAAAACGAAGGCTCTATTAAGTTTTGCAGACGATGAGGAAGATACCGAGGTATTTCAGGTGCGAAAGTCGTCAAACAGTAAAAAAATTATGCGCATGTTGGATCGAGAGCGACGTCGCAAGCGTAAGGAGGAACGCCATAATACACAGTCATCTGTAGACGTTGGTAACAGTGATTGTGGTGATGGTGGTGCTTCCATTGGACGACAACGTGAACGACAGTCATACGAACGTTCTGAGAATGGAAAATCTACTAACGGCAGTAGTAATTATTCTCACAATTTAGGTTCCACTACCACATCAAGTAATAAATATAAGGGTACAACAGCATTAGCATCGAGCGGAAAGTCCCTAGGCACTGTCTCAGCATCTGCTGTTGAACAGTGTAAAAGTAAAAAATCTGATAGTATCCAAACAGAAATACGCACAGACGACTTTGTGCTTGTTGTTAAAAAATCTGAACCAGAAATTATACTTAATGGACGCGCAGCGATTTGTGCTGGTCGCAACGACATGTCAGACGAAGATGGACCCGAAGCAGATGAAGATGAGCGTGAGGGAAAACATCGTTTTTCAAAGCCTGAACACCTAAAACAAATGTTGGAAAGCGGTTCTATACCCGATGCCGCAATGATACACGCTGCACGAAAACGTCGACAGAAAGCGCGAGAACAAGGTGATTTTATACCAGTCGAGGAGCCAAAAGAGCCAGTGAAGAAAGGCAGCCGGTTGGCACGTGAAGATGTGGAGGGTGATAATTCTGATGACGAAGAGCGTATGGACATGACAGTTGCGACTGCCAAAAAGGAACGTGAAGAGCGACGTGAACAATTTTACGCCGTGGAAAACAACGATTATTCCGATGAAGATTCTGATCGCGAAATGCATGAGTGGGAGAATCAACAAATACGTAAAGGTGTAACCGGTGCCCAATTGGTGAGTGCACAACATGATGCGGTGCTCTCACGATTCATGATAAAGCCTGCAACTACCAATGCATTAGAATATGTGCCAGAACAACAATCGACTTCGACGCTGTTGGAACAAGCCTATGCTAAGAGTGCTCTGCAGAAACCCCAACAAATATTGAGCGGATCAACGAAACCGAAAAAGGAAAAGGTTAAAGCCGCTTCTATGCGCACACCGAAGGAGATACACGATGCAATACGTACACGTTTGACGAAATTACAAGAGGTTAACCAGAAACACATGAGTGATATTGAACGTATAGTCAATGATTTGAAGATATTAAAGTTAGAGGAATTAGATTGTACACAGAAAGCGCCAACAGCGGCAGCTAAATACCGTTTTTATCAAGAACTTAAATGCTACGCTGCCGATTTGGTGGATTGTCTGACGGAGAAGACACCAACAATCAATGAATTGGAGAAACGCACTTTGCTGGTATATTCAAAGCATCAAAACTTTCTCATTGAGCGTCGCCGTCAGGATGTGCGCGATCAGGCCAAGGAAATGGCGGAGGCTTCAAAACCTGCTGGCTCACGGCGTGCACCCGAGTCGGAGGAGCAAATTAGACGTGCCGCAGAGCGCGAAGGCAGACGTACGCGCCGTCGTTGTGAACGTGAAAAAAATGAACTGCTGACATCACATTTGGATGGCATGTCTAGTGATGATGAGACATCGGATCGCTATCAGGAGCAATTGAAAACTAACTTAGAGCAAATACAAAAGGAATCAGAGGCAATATTTAACGATGTAAATGATGACTTTTATAAAGTCGATTTGATATTAATGAAATTTTATGCTTGGCGCAAAACTGACATTGAATCCTACAAAGATGCTTTTGTTAGTTTATGTCTGCCTAAGGTTCTTGGTCCTCTTGTGCGTTTGGAAATGCTGTCCTGGTCACCACTACTCGATGAATATAAAGATATTGAGAAAATGAACTGGTATTCAGCTTGTATGCTTTATGCTGGTGGTGAAGATGAAACCGAAGCAACTTTAAGACTTGATCCCGATATTAATTTGGTGCCAACGATTATTGAGAAAATTGTGCTACCCAAAATGACAGATATTGTGAATCAATGCTGGGATCCCTTATCAACAACGCAGACATTACGTTTAATTGGCTTTATAAACCGTTTGGCACGCGATTTTCCACTTAAAGAGAGTTCAAAACAGTTGCAACAATTATTTGAGAAGATTTTAGAAAAAATGAAGCTAGCTTTGGAGAACGATGTCTTCATACCGATATTCCCTAAACAAGTACAAGAGGCAAAAACTTCGTTTTTCCAACGTCAATTTTGTAGCGGACTAAAACTGTTTCGAAATTTTCTTAGCTGGCAGGGTATCTTAGCAGACAAACCCTTGCGTGAAATGGCAATCGGTTTATTACTCAATCGCTACCTATTGCTTGCTATGCGGGTTTGCACAGCCAACGATGCAATAACTAAAGCCTACATCATAGTGAATACATTGCCAACAGTTTGGCTGCAACCGGAATCGGAGACATTGCAGAATTTACAGTTACTAATTACCTACATTAAACAGACTTTGGACGCATTCGATGCAAATAATCCACTTTTTATACAAACTAGTGATAAAGCAAAACAAATACTGCAACGGTTACATAGCTACTAA
- Protein Sequence
- MSLFRKPKKIQRRVFSSALDEEDENAADDMEVEIDGEQSLQNNKKSKDGGPKKSGNKADKIEEPKTKALLSFADDEEDTEVFQVRKSSNSKKIMRMLDRERRRKRKEERHNTQSSVDVGNSDCGDGGASIGRQRERQSYERSENGKSTNGSSNYSHNLGSTTTSSNKYKGTTALASSGKSLGTVSASAVEQCKSKKSDSIQTEIRTDDFVLVVKKSEPEIILNGRAAICAGRNDMSDEDGPEADEDEREGKHRFSKPEHLKQMLESGSIPDAAMIHAARKRRQKAREQGDFIPVEEPKEPVKKGSRLAREDVEGDNSDDEERMDMTVATAKKEREERREQFYAVENNDYSDEDSDREMHEWENQQIRKGVTGAQLVSAQHDAVLSRFMIKPATTNALEYVPEQQSTSTLLEQAYAKSALQKPQQILSGSTKPKKEKVKAASMRTPKEIHDAIRTRLTKLQEVNQKHMSDIERIVNDLKILKLEELDCTQKAPTAAAKYRFYQELKCYAADLVDCLTEKTPTINELEKRTLLVYSKHQNFLIERRRQDVRDQAKEMAEASKPAGSRRAPESEEQIRRAAEREGRRTRRRCEREKNELLTSHLDGMSSDDETSDRYQEQLKTNLEQIQKESEAIFNDVNDDFYKVDLILMKFYAWRKTDIESYKDAFVSLCLPKVLGPLVRLEMLSWSPLLDEYKDIEKMNWYSACMLYAGGEDETEATLRLDPDINLVPTIIEKIVLPKMTDIVNQCWDPLSTTQTLRLIGFINRLARDFPLKESSKQLQQLFEKILEKMKLALENDVFIPIFPKQVQEAKTSFFQRQFCSGLKLFRNFLSWQGILADKPLREMAIGLLLNRYLLLAMRVCTANDAITKAYIIVNTLPTVWLQPESETLQNLQLLITYIKQTLDAFDANNPLFIQTSDKAKQILQRLHSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00091240;
- 90% Identity
- iTF_01562891;
- 80% Identity
- -