Basic Information

Insect: Bacillus rossius
Gene Symbol: -
Assembly: GCA_032445375.1
Location: CM063640.1:279542425-279543564[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00047 0.13 15.2 3.3 1 23 152 174 152 174 0.97

2 8 4.6e-05 0.013 18.4 6.4 1 23 180 202 180 202 0.96

3 8 5.9e-05 0.016 18.1 5.3 1 23 208 230 208 230 0.99

4 8 1.6e-05 0.0043 19.9 2.1 1 23 236 258 236 258 0.95

5 8 4.2e-06 0.0011 21.7 0.8 1 23 264 286 264 286 0.97

6 8 9.1e-06 0.0025 20.6 0.1 1 23 292 314 292 314 0.97

7 8 0.00035 0.095 15.6 0.8 1 23 319 341 319 341 0.97

8 8 1.1e-05 0.0031 20.3 2.4 1 23 348 370 348 370 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00047	0.13	15.2	3.3	1	23	152	174	152	174	0.97
2	8	4.6e-05	0.013	18.4	6.4	1	23	180	202	180	202	0.96
3	8	5.9e-05	0.016	18.1	5.3	1	23	208	230	208	230	0.99
4	8	1.6e-05	0.0043	19.9	2.1	1	23	236	258	236	258	0.95
5	8	4.2e-06	0.0011	21.7	0.8	1	23	264	286	264	286	0.97
6	8	9.1e-06	0.0025	20.6	0.1	1	23	292	314	292	314	0.97
7	8	0.00035	0.095	15.6	0.8	1	23	319	341	319	341	0.97
8	8	1.1e-05	0.0031	20.3	2.4	1	23	348	370	348	370	0.96

Sequence Information

Coding Sequence: ATGAATGAAAGTCTTCAACAAAATGGACCACATCAAGCTCATAATCCAGTGAGAAAGCATCATGACATATTTAACATTGCCTGTGAGAAAGGCTGCAATTGTGAAACTGCTAATTCCATTTTCCGCGCAGGGAATAGCCTAATGTTTTCTCCCGACAAGCATCCTGCCACATCTAAACATTTCATGTCACCATGTGGCCCTTTGCAGTTAACAGCACAGGAATGTGGCGAACTGTTGCTGAAGAAAGTGTCTACTGCTGGCAGTATTATCGGGCCAGAGACGTTAAACATGAGTGTTGACAATCAGAGTCCAGTCGATGGCAGCAACGTGCAGAGAAAAAGTCGACCACCTGGGAGCAACGTAACTGTAGTTCACCAAGGCACTCTGACTGAAAATGGGGCTAAAATCTCACCTTTGCAAGGTCAGAAGTACCGGGTTGCAAAAGAGCGTCCCTTTTCGTGCACAGAGTGTGGGAAGTCATTCCTCCTGAAGCACCACCTGGTGACCCATGCCCGCGTTCACACCGGTGAGAGGCCACATGTCTGCCCAGAGTGTGGGAAGAGCTTCGCCCACAAGCACTGCCTCAGCACGCACCTTCTCCTCCACAGCAGCGACCGCCCCTACAAGTGCATGGAGTGCAAAAAGTCTTTCACTCTCAAGCACCACTTGGTCACGCACGCCCGGGTCCATAGCCGGGACCGGCCCTTCGTGTGCCAGGAGTGCGGGCGGACGTTCCCCCAGAAGCGCCACTTGGTGACGCACGGCAAGTTCCACTCGGGTGAGCGCCCGTTCGTCTGTGACGAGTGCGGCGAGTCCTTTGCTCAAAAGGACCACCTGGTGATGCACTCGCGGTTCCATGGCGCGCAGCGTGCATTCGTCTGCCCGGACTGCGGCAGCACCTTCGCTCGGAAGTTCGAGCTGGTGAACCACGGCAGGCTGCATGGCCGTCTGCCGCACTCGTGCGAGATATGCGGGAAGGAGTTTCTCCAGAAGCGCACTCTGCTTGCACACGCCCGCCTGCACATCGAGGGCGAACGGCCGTTTGTCTGCCAGCACTGTGGTGAGCACTTTGCCCGCAAGTCGGAGCTCACGGAGCATTCCAGCATCCACACTGAGGATACTAAGTTCGTTTGCAGGTAA
Protein Sequence: MNESLQQNGPHQAHNPVRKHHDIFNIACEKGCNCETANSIFRAGNSLMFSPDKHPATSKHFMSPCGPLQLTAQECGELLLKKVSTAGSIIGPETLNMSVDNQSPVDGSNVQRKSRPPGSNVTVVHQGTLTENGAKISPLQGQKYRVAKERPFSCTECGKSFLLKHHLVTHARVHTGERPHVCPECGKSFAHKHCLSTHLLLHSSDRPYKCMECKKSFTLKHHLVTHARVHSRDRPFVCQECGRTFPQKRHLVTHGKFHSGERPFVCDECGESFAQKDHLVMHSRFHGAQRAFVCPDCGSTFARKFELVNHGRLHGRLPHSCEICGKEFLQKRTLLAHARLHIEGERPFVCQHCGEHFARKSELTEHSSIHTEDTKFVCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01449877;
90% Identity: -
80% Identity: -