Bros070421.1
Basic Information
- Insect
- Bacillus rossius
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_032445375.1
- Location
- CM063648.1:51786848-51790495[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-10 1.2e-05 27.3 0.1 276 300 13 37 5 37 0.89 2 2 0.00021 11 7.7 4.0 120 173 35 88 34 95 0.93
Sequence Information
- Coding Sequence
- ATGGCAGTACCAGTGTCAGTGTGTCGTGTGTCCGTCGTTGCAGGGGAAGCCAACAAGCTGCTGGGGGAGTACAAGTTCAAGCTGCAGAAGGCAGAGCAGGACGTGTCTACGCTGCAGGCCACCGTGGCACGCCTGGAGAGCCAAGTGATCCGCTACAAGTCCGCGTCTGAGTCGGCGGAGAAGGTGGAGGACGAGCTGAAAGTGGAGAAGAGGAAGTTGCAGCGCGAGGTGAAAGAGCTGGCGCAGCGTCTCAGCCAAGCTGAGGCGGCTAAGAACGCCTTGGCACACCAGTTCGACCAGCTAAAGTCGACGCGTCGATAA
- Protein Sequence
- MAVPVSVCRVSVVAGEANKLLGEYKFKLQKAEQDVSTLQATVARLESQVIRYKSASESAEKVEDELKVEKRKLQREVKELAQRLSQAEAAKNALAHQFDQLKSTRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -