Basic Information

Gene Symbol
-
Assembly
GCA_032445375.1
Location
CM063647.1:3376245-3385931[-]

Transcription Factor Domain

TF Family
CSL
Domain
BTD domain
PFAM
PF09270
TF Group
Beta-Scaffold Factors
Description
Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 0.034 1.8e+03 1.5 0.0 96 121 153 178 150 180 0.88
2 27 0.027 1.5e+03 1.8 0.0 96 121 185 210 183 211 0.89
3 27 0.044 2.3e+03 1.1 0.0 96 121 217 242 215 243 0.88
4 27 0.017 8.9e+02 2.5 0.0 96 120 281 305 249 307 0.80
5 27 0.49 2.6e+04 -2.3 0.0 96 121 313 338 311 340 0.83
6 27 0.023 1.2e+03 2.0 0.0 96 121 345 370 342 372 0.89
7 27 0.04 2.1e+03 1.2 0.0 96 121 377 402 375 404 0.88
8 27 0.046 2.5e+03 1.0 0.0 96 121 409 434 407 436 0.87
9 27 0.029 1.5e+03 1.7 0.0 96 121 441 466 438 468 0.88
10 27 0.024 1.3e+03 2.0 0.1 96 121 457 482 455 484 0.88
11 27 0.016 8.4e+02 2.6 0.0 96 121 473 498 470 500 0.89
12 27 0.015 8.1e+02 2.6 0.1 96 121 489 514 477 516 0.82
13 27 0.024 1.3e+03 2.0 0.0 96 121 505 530 501 532 0.89
14 27 0.055 2.9e+03 0.8 0.0 96 121 521 546 518 548 0.87
15 27 0.075 4e+03 0.4 0.0 96 121 537 562 534 564 0.86
16 27 0.04 2.1e+03 1.2 0.0 96 121 553 578 549 580 0.88
17 27 0.02 1e+03 2.2 0.1 96 121 569 594 559 596 0.89
18 27 0.062 3.3e+03 0.6 0.0 96 121 585 610 583 611 0.86
19 27 0.021 1.1e+03 2.1 0.1 100 121 605 626 599 643 0.58
20 27 0.047 2.5e+03 1.0 0.0 98 121 635 658 630 675 0.64
21 27 0.084 4.4e+03 0.2 0.0 96 121 681 706 676 708 0.87
22 27 0.061 3.3e+03 0.6 0.0 96 121 697 722 695 723 0.87
23 27 0.036 1.9e+03 1.4 0.0 96 121 713 738 711 740 0.87
24 27 0.088 4.7e+03 0.1 0.0 96 121 729 754 727 756 0.86
25 27 0.085 4.5e+03 0.2 0.0 96 121 745 770 742 772 0.87
26 27 0.34 1.8e+04 -1.8 0.0 96 117 793 814 777 822 0.64
27 27 0.11 6e+03 -0.2 0.0 96 121 825 850 822 851 0.86

Sequence Information

Coding Sequence
ATGTTTCTGGATCGCATAGTCTACAGTGAAGATCTAGTCTTGATCCACCTGCCTCGCAAATCCACGATCTTTGATCGACTAATATTCACCAGGTTCACAGACTTGGACTCGTCAAATATGTTGATGTGCCACTTCCACTTCAATTCGAGAGGAAGACACCCATTCCTTGTGGTGCAGATGAAATGTGGAGATCGCCCTGAGCTGCGGCGAGCAGCGTGGAGAAGCTATGCGTACTGCCGAGAGCTGGCATGTGACCACAGATCAAGGCGAGAAGCGcacccctcgtggacctccgtcaccgcactccgccgccgccgtcgcacttccccgacgcctcgctcggaactctgCCGCGCCcTCCCGGAAGCCCTTGGCGAAGGGGTTGCTCGCAATCTTCAACTGCGTGATCTGCAACAACACAGGCGCCGTCAGCTCCACTGGCGACCACCGAGCTCATCCAACTCCGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCAAACACCGCGCTCATCCAACACCGCGCTCATCCAACAACGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGACCTCATCCAACAACGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGACCTCATCCAACAACGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGACCTCATCCAACAACGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGACCTCATCCAACAACGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGACCTCATCCAACAACGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGACCTCATCCAACAACGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGACCTCATCCAACAACGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGACCTCATCCAACAACGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGACCTCATCCAACAACGCGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGAGCACATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCAAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCTACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGGTCATCCAACACCGCGGTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGCGGTCATCCAACACCGCGGTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGCGGTCATCCAACACCGCGCTCATCCAACACCGCGGTCATCCAACACCGCGCACATCCAACACCGAGCTCATCCAACACCGCGGTCATCCAACACCGCGGTCATCCAACACCGCGCTCATCCAACACCGCGGTCATCCAACACCGCGGTCATCCAACACCGCGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGCGCTCATCCAACACCGAGCTCATCCAACACCGAGTCTCATCGACAGCGCCTCGGGCGACAGAAAACTGATTTCGAAGTAG
Protein Sequence
MFLDRIVYSEDLVLIHLPRKSTIFDRLIFTRFTDLDSSNMLMCHFHFNSRGRHPFLVVQMKCGDRPELRRAAWRSYAYCRELACDHRSRREAHPSWTSVTALRRRRRTSPTPRSELCRALPEALGEGVARNLQLRDLQQHRRRQLHWRPPSSSNSALIQHRAHPTPRSSNTALIKHRAHPTPRSSNNALIQHRAHPTPRSSNTDLIQQRAHPTPSSSNTALIQHRAHPTPRSSNTDLIQQRAHPTPSSSNTALIQHRPHPTTRSSNTALIQHRAHPTPTSSNNALIQHRAHPTPRSSNTDLIQQRAHPTPSSSNTALIQHRPHPTTRSSNTELIQHRAHPTPTSSNNALIQHRAHPTPRSSNTDLIQQRAHPTPSSSNTALIQHRAHPTPRSSNTDLIQQRAHPTPSSSNTELIQHRAHPTPRSSNTALIQHRAHPTPSSSNTALIQHRAHPTPRSSNTELIQHRAHPTPSSSNTELIQHRAHQTPRSSNTELIQHRAHPTPRSSNTELIQHRAHPTPSSSNTELIQHRAHPTPSSSNTALIQHRAHPTPRSSNTALIQHRAHPTPSSSNTELIQHRAHPTPSSSNTELIQHRAHPTPSSSNTALIQHRAHPTPSSSNTELIQHRAHPTPSSSNTALIQHRAHPTPRSSNTALIQHRAHPTPRSSNTALIQHRGHPTPRSSNTALIQHRAHPTPRSSNTALIQHRAHPTPRSSNTAVIQHRAHPTPRSSNTALIQHRAHPTPRSSNTALIQHRAHPTPRSSNTALIQHRAHPTPRSSNTALIQHRGHPTPRTSNTELIQHRGHPTPRSSNTALIQHRGHPTPRSSNTALIQHRAHPTPSSSNTALIQHRAHPTPSLIDSASGDRKLISK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-