Belo023053.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- clz9
- Assembly
- GCA_951217065.1
- Location
- CATNUY010000416.1:1552652-1555151[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-09 8.2e-06 27.1 0.0 2 39 22 60 21 64 0.89
Sequence Information
- Coding Sequence
- ATGACAAGAACAAGTGAGAAGGCGCAAGCAAAAAATGCCAAAAAGCGAGTTATACCGTACAAAGACACAGATTTGGAGCAGGCTTTATTTGAGATCCGCCAAAACAAACTGCCAATTCGAGCAGCAGCCAGAAAGTTTAAGATCCCAAGGACGACTCTGCAGGACAGAGTACATAATAGAACTGCGGATAACCTTGGGAAATTTGGTCCCTGCCCTGTGCTGTCTGCAGAGGAAGAACTAAAACTAAGAAACTGGCTTGTAAACTTAGCTAAATGTGGTTTTCCTCAAACCTCGGAAAATCTATTGAGAACGGTGCAAGCTATTCTTCAAGAAGATGGGCGTAAAACTCCTTTTAAAGACAACAAACCAGGGAAAAAATGGTATTACAGTTTCATGCGACGCCATCCCGATCTAAGCCTTCGAACAGCTGAAACTGTCTCTAAGGCCCGCGCCCAAGTTACCGAGGAAGGGATAAAGAAGTGGTTTGAAGAGCTAAAAGAGTACCTAGCCCAAGAAGACTCTTTAGACATTCTTGAGGACTCTTCCAGAATTTTCAACGCGGACGAAACGGGATTCAGTATGGCTCCAAAAACTGGGAATGTCATTGCCCCAAAAGGAATCAAAAACCTGTATGAAATCAAGGCAgccaatgaaaaagaaaacctAACTGTGCTGATGACTTTCTCCGCAAATGGAAGAACACTACCACCTATGGTTGTTTTGCCTTACAAAAGGTCGCCCAGCTGGCTGAAATCTATCCAAAATAAGAAGCCTGACTGGGTTTTTGGCAAAACAGACAGTGGATGGATGCGGGGAGAAACTTTTCTTCAGTATGTGAAGGATGGCCTGAACAAATGGATTTCAAACAATAGTGTCAAACgtccagttttattttttgttgatggaCATGCTTCTCACATGTCTCTTGAACTCAGCGACTtctgcagcagcaacaacataaTATTGTATGCGCTTCCTCCAAACACCACTCATATCCTTCAGCCGGCTGATGTAGGTGCCTTTAAAGGACTGAAGTCAGACTACAGAAACATTTTGAACGAGTGGCGAAAACGTTCGGGTAACCACGGCAGCACGATGAATAAAGAGAATTTTTGTGACGTGCTAGAAGAGCTGCTGAATTACAAAGATAGGACAACCATCATACAAAATGCCTTCAAAAAATGTGGATTATTTCCATTTGATCCAAATGCCGTGGACTACTCGAAATGTGTCAAAAATACtcttcaaaatttgaataacgTTTCTAATATCGGTGGTGATGCTTGCAGCAGCTGTAGTCTTGGAGATATTGGTCCGGACGTAAATTTTAGAGGCGATGTAGACTTTCAGGGAAACCTTGGAGCTGATTCTGGTGATATGTCTTCTCACTATCCTGATAACAATGGTGGTTTTCCGGATTTTGGTTTAGTCGAAGAACATAACGAAGACTTTGTGGTCAACTTCAACTGCGATGTGGATGGTGGGGGCAGTAATGCTAACGATATTACCCGCCCAAGTTTTATTGAAGCCGAAAAAGTTATACTTCTCCTAAAAGACaaacttaaaatgaaaaacatcgaCCATGAAGTTATTCTGGACCTCATTCGACACGctaagaaaaacattgttgATGTTTCTAAGAGCACTCAAGACATTGAAGGGATATATGAAGTCACCAGCGACGGCACCCTGATGAGATTACCCCAGCTCAGTGCAGGCAGTTTTGAGGCAGGGAATAGTCTACATGCATCAGAAGAAATCATGGatacTATGGACATGGAACTCCGAcatgaaacaagtttttcatCGCATGGTAAAGAGAACATTTTGCAAGATATTTCTTGCCAAATTTTGCAGGAAACCACAAGTCCAACAACTCAGCCGCACTCTTCAAAAAGTCCGTCaatcttcaaaaaattccttAAATACCCTGAACCAATAAGAAACTCGGTAAAACGGTATTTCAATTGTCCGAAACCACCTATGTCCATATCTTCACCGGCTTGGAAAGCTTTCCAACAAAACAAAGAAGCTGAGAAAAAACGTATAGCCGCTGAAGTGGAAGAAAGAAAGCAAGttcgacagaaaaaaaaagaagagaaatcTTTAAAAGCcgctgaaaacaaaaaaataaaacaaaaacgaggagaaaacaacaagccctcgactaaacgaaaaaaaattgtgccaaAATGTCCTTCGTGCAATGAAGACGTCCTTACGGACGTAGAAGAAGATGGGCTCAAAAACTTAGGGTGTGACAATTGCGAAAAGTGGTTTCATCTAAAATGTACCAAATTGTCAGCCATGCCCTTTGCAGATGCTGAACTTAAAGATTTTATATGTAACAATTGTGATAATACACTTTCCAAAATGTGA
- Protein Sequence
- MTRTSEKAQAKNAKKRVIPYKDTDLEQALFEIRQNKLPIRAAARKFKIPRTTLQDRVHNRTADNLGKFGPCPVLSAEEELKLRNWLVNLAKCGFPQTSENLLRTVQAILQEDGRKTPFKDNKPGKKWYYSFMRRHPDLSLRTAETVSKARAQVTEEGIKKWFEELKEYLAQEDSLDILEDSSRIFNADETGFSMAPKTGNVIAPKGIKNLYEIKAANEKENLTVLMTFSANGRTLPPMVVLPYKRSPSWLKSIQNKKPDWVFGKTDSGWMRGETFLQYVKDGLNKWISNNSVKRPVLFFVDGHASHMSLELSDFCSSNNIILYALPPNTTHILQPADVGAFKGLKSDYRNILNEWRKRSGNHGSTMNKENFCDVLEELLNYKDRTTIIQNAFKKCGLFPFDPNAVDYSKCVKNTLQNLNNVSNIGGDACSSCSLGDIGPDVNFRGDVDFQGNLGADSGDMSSHYPDNNGGFPDFGLVEEHNEDFVVNFNCDVDGGGSNANDITRPSFIEAEKVILLLKDKLKMKNIDHEVILDLIRHAKKNIVDVSKSTQDIEGIYEVTSDGTLMRLPQLSAGSFEAGNSLHASEEIMDTMDMELRHETSFSSHGKENILQDISCQILQETTSPTTQPHSSKSPSIFKKFLKYPEPIRNSVKRYFNCPKPPMSISSPAWKAFQQNKEAEKKRIAAEVEERKQVRQKKKEEKSLKAAENKKIKQKRGENNKPSTKRKKIVPKCPSCNEDVLTDVEEDGLKNLGCDNCEKWFHLKCTKLSAMPFADAELKDFICNNCDNTLSKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00976407; iTF_00976406;
- 90% Identity
- iTF_00976407; iTF_00976406;
- 80% Identity
- -