Aio025823.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Automeris io
Gene Symbol
bab1
Assembly
GCA_036320925.1
Location
JAUDJH010000038.1:177983-187623[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-25 1.2e-22 80.9 0.1 4 98 26 116 23 121 0.93

Sequence Information

Coding Sequence
ATGGCGCTGCAGCCGCAACAGTTTTGCGTCCGGTGGAATTCCTACCATACAAATTTACAGGCGGTGTTCCCGCGCCTGCTGCTGACGGAACAGTTCGCGGACGTGACCCTCGCCTGCGAGTCCAGACAGCTGCGATGCCACAAGCTGGTGTTGTCCGCCTGCTCGGCGTACCTAGAGCGGCTGCTGCTACAGAACCCGTGCGACCATCCCATCGTCCTCATGAGGGATATGAGATTCAGCGAGATGCAAGCGCTAGTGGACTTTATGTACAAGGGCGAAGTGAACGTGACACAGGAGGAGCTGCCCAGCCTCCTCAAGTCAGCTGAAGCCTTGCAGATACGGGGTCTGTGCTCGAGCGACTCGTCAGGAGCGGCGCCGGAGCCGAGCAAGCCTGACAGCAAGGACTTCTCGGTCGCCAGCGACGCGCTCGTCGCCAACGCGCAGCGCAACTCCGTCGCGAACGGTCCAGCCAACCAACCCTCGAAGCATACCGTAGCGGCGTCCCACAGCGCCGCGAACGGCTCCAAGAAACGGAAGTCGGAGGACAGAGCGGACGTCAAGGAAGAGACCGTGGAAGAGGACGGCCTCTTCTACGGAGAGTTGGACAATGATCACATGGAATATAATGAGGACGATGACACAGGCAAACCCGGAAGCAGTTTGGGGCAACCTTCAGGACGCCGCCAGTCCTCCTACCTCCGAGTTAAGCCGGAAAgtgaattattttttcaaaataagtTACAAAGTTTAGCCAAAGCGAATACGGACTACATAAACAAACTTTCCAAGATGAATTCGGCTGAAATTAAGAACGAATTCTCGAAATATGGCCTAAATACTAATGCTGCTGAGGATTATTTGCAGCAAAAAAATGCTGAGAAAGCTGAAAATGATTACTATAAATCATGGTTAGAACAAAATGGCGAGCTGGAAGTGTCCCTGCTCAAAGCGAGTCAAATAAAGAAGTCCAAAATAGAAACGAAGCCGCAAAAGTCCGAGGTGGAGCTGATACCGAAAAGCGTTGCCAGCAAGGAGATTTACGCGAAACTAGGGGAGAAGTCCCAGATACGTAGACGGGGCAGGCCGCCGATTTTCAAAGACAAGAATATAGACATCGGAGACACCGTGCTGAAGTCAGATCTGGACCAGTTTCTGGAGGGAAAGGAGGTCAGCTCCTCGGGGCTGTCGCGCAAGGACCTCGAACGGGTGATGATGGGCAAGTTCAACCCGAACAGGAGATACTCGAACGAAGCTATGTGGGCAGCCCTGATGGACGTCAAGAAAGGTGGCAGTATTTATAGGGCGGCCCAGACTCATAAAGTTCCAAGGAAGTCCCTCCGTAACTGGATGAAGAGATGTCACATCAAATCGTCCTTCCCTATGCCGCAACAGTTGAAGCAGTTCGTAGAGAACAGCAAAAGGCAGAAGGAGTACAAAAACTATGAATATCAACCGGCAAATGATGGCATGAGTTATGAGAAAAGCGGCCCGGAGACGGAATCTTACGAAACCGAACTAGATTTTGGAAAGCACTTCTTGACGTTCAATTCTACATTGTCCAGCGAAGATGAACTGTCGAAAACTGAGGAGAAATCTCCCGATAACGGGGAGAGTAGCGTAGGAGCTGGCAGCACCGCTATCAATATGTCAATGCACGAATGA
Protein Sequence
MALQPQQFCVRWNSYHTNLQAVFPRLLLTEQFADVTLACESRQLRCHKLVLSACSAYLERLLLQNPCDHPIVLMRDMRFSEMQALVDFMYKGEVNVTQEELPSLLKSAEALQIRGLCSSDSSGAAPEPSKPDSKDFSVASDALVANAQRNSVANGPANQPSKHTVAASHSAANGSKKRKSEDRADVKEETVEEDGLFYGELDNDHMEYNEDDDTGKPGSSLGQPSGRRQSSYLRVKPESELFFQNKLQSLAKANTDYINKLSKMNSAEIKNEFSKYGLNTNAAEDYLQQKNAEKAENDYYKSWLEQNGELEVSLLKASQIKKSKIETKPQKSEVELIPKSVASKEIYAKLGEKSQIRRRGRPPIFKDKNIDIGDTVLKSDLDQFLEGKEVSSSGLSRKDLERVMMGKFNPNRRYSNEAMWAALMDVKKGGSIYRAAQTHKVPRKSLRNWMKRCHIKSSFPMPQQLKQFVENSKRQKEYKNYEYQPANDGMSYEKSGPETESYETELDFGKHFLTFNSTLSSEDELSKTEEKSPDNGESSVGAGSTAINMSMHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00112623; iTF_00114214; iTF_00113428; iTF_01316506; iTF_01317434; iTF_00819313; iTF_00429172; iTF_01430068; iTF_00428281; iTF_00236757; iTF_00235979; iTF_00858710; iTF_01358999; iTF_00859629; iTF_00290836; iTF_00787810; iTF_01010526; iTF_00063734; iTF_01490272; iTF_00341469;
90% Identity
-
80% Identity
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