Aio024541.1
Basic Information
- Insect
- Automeris io
- Gene Symbol
- -
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000032.1:3366212-3366709[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-07 7.5e-05 23.1 0.0 2 44 11 52 10 53 0.88 2 2 6.6 4.4e+03 -1.8 0.0 24 29 155 160 155 161 0.84
Sequence Information
- Coding Sequence
- ATGCCTCCcacaaaaattctgcagtatGATGAGGAAGTTATGACAAAAGCCCTGGATGACGTGATGCGTTGGGTACCTGTGTACGCGGCTGCTAAGAAGTACAAAATACCCCGCTCTACACTTCAGAGCAAGGTCAAAGGGATCAACCCAATATCAAGAAAAATGGGAGCCCGTACGGCTTTTACGGCCGATGAGGAACTGAAAATTGAGGAATGGGTCCTTGAATTAGCGAGAAAAAGATTTCCCGTTTCGAAAGGAACCTTTTTAATAAGCATGCAAAGATTAGCCGCTCTATTAGGGAAGGACATTTTCCGTGATAAGGTTCCATCCGAAAAGTGGTATGGCAGTTATGGCAGTCATGGGCGACTGTGGAAATGGCCTCAAAGGGAGGATCGGTTATTTTATGCTTGGGACGATGTTGTGGGCAAAATAAAAACGCCCACCAAATTTAGTTCAACTAGGAAGATTTATGATGTGCCCCAAGTTGCAAatctttaa
- Protein Sequence
- MPPTKILQYDEEVMTKALDDVMRWVPVYAAAKKYKIPRSTLQSKVKGINPISRKMGARTAFTADEELKIEEWVLELARKRFPVSKGTFLISMQRLAALLGKDIFRDKVPSEKWYGSYGSHGRLWKWPQREDRLFYAWDDVVGKIKTPTKFSSTRKIYDVPQVANL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187081;
- 90% Identity
- iTF_00187081;
- 80% Identity
- -