Aio006361.1
Basic Information
- Insect
- Automeris io
- Gene Symbol
- -
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000006.1:5540175-5540576[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-10 4.3e-07 30.2 0.0 1 44 10 52 10 53 0.90
Sequence Information
- Coding Sequence
- ATGCCTCCcacaaaaattctgcagtatGATGAGGAAGTTATGACAAAAGCCCTGGATGACGTGATGCGTGGGGTACCTGTGTACGCGGCTGCTAAGAAGTACAAAATACCCCGCTCTACACTTCGGAGCAAGGTCAAAGGGATCAACCCAATATCAAGAAAAATGGGAGCCCGTACGGCTTTTACGGCCGATGAGGAACTGAAAATTGAGGAATGGGTCCTTGAATTAGCGAGAAAAGGATTTCCCGTTTCGAAAGGAACCTTTTTAATAAGCATGCAAAGATTAGCCGCTCAATTAGGGATGGACATTTTCCGTGATAAGGTTCCATCCAAAAAGTGGTATGGCAGTCATGGGCGACTGTGGAAATGGCCTCAAAGGGAGGATCGGTTATTTTATGCTTGA
- Protein Sequence
- MPPTKILQYDEEVMTKALDDVMRGVPVYAAAKKYKIPRSTLRSKVKGINPISRKMGARTAFTADEELKIEEWVLELARKGFPVSKGTFLISMQRLAAQLGMDIFRDKVPSKKWYGSHGRLWKWPQREDRLFYA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187099; iTF_00957886; iTF_00957887; iTF_00187094; iTF_00187080;
- 90% Identity
- iTF_00187080; iTF_00187094; iTF_00187099; iTF_00957886; iTF_00957887;
- 80% Identity
- -