Apul031033.1
Basic Information
- Insect
- Autographa pulchrina
- Gene Symbol
- GATA-B
- Assembly
- GCA_905475315.1
- Location
- FR997764.1:15117783-15123463[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-18 2.2e-14 53.5 3.9 1 34 97 129 97 131 0.97 2 2 1.1e-17 4.8e-14 52.4 7.2 1 34 166 198 166 200 0.97
Sequence Information
- Coding Sequence
- ATGTATTGGAATTGGGGCGGAGTTTACGGTACAGTAGCGAGTGCGGGAACAGTTCAGCGCCGGGAGCAGGGTCGACGCTCGCGGCCGTTAGCGGCGTGTGACGTCACCGTGCCGGTGCGTGACGTCACCGCTCGCGAGCTCCGCGCCAAGACGTGCGCGCGCGTGCTGTGTCAGCAGAGCCCGCGCTCACGTGTCGCTCCGGCGGTGAATCAACAACTGCCACTGCCAAGGTCGCGGACGGACCATGTTGGGCTCGACGTGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGGCTGTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCGTCGCCGCGCCGCACGCGCCCGCGCACGCGCACGACATGGGCACCAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACCACCACCACGTCGCTGTGGCGCCGCAACTCGCTCGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACTCCATACAGACAAGAAAGAGGAAACCTAAGAACAGTATAAAAGCGGAGCGAAGTATCAAGACAGCCGTCCAGCGCACCGTCACGTCCGGCGTCAAGATCGAGAACCTGCTGGAGGGCGGGTCGGCAGGCGGGAGCGGCGCTCGTTCCCCGCTGGCGCTCAACTACTACGTGCAGCAGCACCCGCTCAAGCTGGAGGAGCCGCCGCCGGCGCACAGCGCGCACGCGCAGGCTGCGCAGCACGCGCCGCACGCTCTCGGCCACGCGCACGCTGCGCACGCCGCGCACGCCGCACACCCGCACGCCGCGCACGCGCACGCGCTCTACGACGACGAGTACCGGCGCGCCGCGGACGAGCGTGTCGAGCGCCCCACCGTGGTGTCGCTGGGCAGCTGA
- Protein Sequence
- MYWNWGGVYGTVASAGTVQRREQGRRSRPLAACDVTVPVRDVTARELRAKTCARVLCQQSPRSRVAPAVNQQLPLPRSRTDHVGLDVAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRVAAPHAPAHAHDMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERSIKTAVQRTVTSGVKIENLLEGGSAGGSGARSPLALNYYVQQHPLKLEEPPPAHSAHAQAAQHAPHALGHAHAAHAAHAAHPHAAHAHALYDDEYRRAADERVERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00001665; iTF_00000850; iTF_01222134;
- 90% Identity
- -
- 80% Identity
- -