Atri020778.1
Basic Information
- Insect
- Abrostola tripartita
- Gene Symbol
- GATA-B
- Assembly
- GCA_905340225.1
- Location
- HG996489.1:15082527-15088187[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-18 1.7e-14 53.4 3.9 1 34 112 144 112 146 0.97 2 2 1.2e-17 3.7e-14 52.3 7.2 1 34 179 211 179 213 0.97
Sequence Information
- Coding Sequence
- ATGCTCACGTGGGTGGGATGTGGCGGGAACAATGCAGCGGCCGGGTCGACGCTCGCGGCCGTTAGCGGCTGTGACGTCACGGCGGATCCAGTGACGTCACAGCCCGCTCGGCCAACGCGGACGTGCGCATGCGCGCTGTGTCAGCACGGCGCTCACGTGCATCTCTCCGGCGCGCGGCGGGCGGCGGTGAATCAACAACAACTGTCACTGTCAAGGTCGCGGACGGACCATGTTTGGCGCTCCTTTGTTTCATATTGTTCTCTGCACAAACTCAATGCTGACGAGCACAAAATCCGCTTCGACGTGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTGTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCGTCGCCGCGCCGCACGCGCCCGCGCACGACATGGGCACCAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACCACGACGACGTCGCTGTGGCGCCGCAACTCGCTCGGCGAGACCGTGTGCAACGCGTGCGGCCTGTACTACAAGCTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACTCCATACAGACGAGAAAAAGAAAACCTAAGAATAGCATAAAAGCGGAGAGAAGTATCAAGACAGCCGTGCAGCGCACCGTCACATCCGGCGTCAAGATAGAGAACCTCTTGGAGGGCGGGGCCGGCAGCGGCGCGCGCTCCCCGCTGGCGCTCAACTACTACGTGCAGCAGCACCCGCTCAAGCTGGAGGAGCCGCCGCCGGCGCACAACGCGCACGCGCAGCCGGCGCAGCACTCGCTGGCTCACTCGCACGCCGCGCACGGCTCGCACGGCCCGCACGGCTCGCACGGCGCGCACTCGCACGCGCACGCGGCTCACGCGCACTCGCTGTACGACGACGAGTACCGGCGCGCGGCCGACGAGCGCGTGGAGCGGCCCACCGTGGTGTCGCTGGGCAGCTGA
- Protein Sequence
- MLTWVGCGGNNAAAGSTLAAVSGCDVTADPVTSQPARPTRTCACALCQHGAHVHLSGARRAAVNQQQLSLSRSRTDHVWRSFVSYCSLHKLNADEHKIRFDVAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRVAAPHAPAHDMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERSIKTAVQRTVTSGVKIENLLEGGAGSGARSPLALNYYVQQHPLKLEEPPPAHNAHAQPAQHSLAHSHAAHGSHGPHGSHGAHSHAHAAHAHSLYDDEYRRAADERVERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00186795;
- 90% Identity
- iTF_00001665;
- 80% Identity
- -