Basic Information

Gene Symbol
-
Assembly
GCA_905475315.1
Location
FR997787.1:5574024-5578384[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.52 1e+03 0.7 0.3 2 18 70 86 69 126 0.48
2 7 0.0011 2.1 9.3 0.0 21 45 341 366 337 367 0.88
3 7 0.034 65 4.5 0.4 22 45 444 466 416 467 0.75
4 7 0.0025 4.8 8.2 0.2 22 46 579 613 567 613 0.74
5 7 4.9e-06 0.0095 16.8 0.2 3 45 664 713 662 714 0.86
6 7 0.00011 0.22 12.4 0.2 13 39 854 887 839 888 0.83
7 7 0.0031 6 7.8 0.2 2 16 1051 1065 1050 1111 0.65

Sequence Information

Coding Sequence
ATGGATCCAATAGTAGTGAAGACTGAAATGCAGAGTAATGGAGAAATATTACTATTTTATGTTGATGAAAATGGAGGCAATGAAGAAGGTGTTTTAACAACAGTTGAAAGCATAGAAAACCAAGCTATACAACTCCAACAGGACACTTCTTACATAATACCGGACGATGGGGTCACTAATGAAATTAAAATAGAACAGTTACACAGAGATAACTGGACCGAGGACCAAACTAAAAGACTTCTTGTATTCTACAATGATAATAAACAAACTTTCATAACAGGATCCACAAAAAAGAATCATCTTTGGACAGTCGCTTGTAAAACAATGCTTGTAGGCAAAAACCCTAATGCTTGTGAAGCTAAACTGCAGAACTTAAAATCAAAATACTTCGAAATCTGTGGGCATATACAGAAAGGAGTCTATGTAAAGTGGCCATACTTTGAGCTCTGCCATCAAATATTTCATGATGAAAGTGCAGTTATTACTGTTGAAACATTGACCACACCACCAGAAACTCAAGTCATTAAAGTGCCAGCATTACAACCGAGTTATGATAATGTTATGGTGGTGAAGAAAGTTAATAGTCGGACAAAAGCTAATGAGAATGTTGAGACAATGCTGAATTTGTATTTGAAATATAAGAAAAACTTTCAACAGGAGTATTGGAGACGAGGGTTATGGGAAACTATTGCTATGGAAATAGGGGAAGAAGACGGAGAGTATTGGCAGAAGCGGTTCCTAAACTATAAACAACATTACCTTAGGTTGTTGGATAAAAGACGGTTAAGTGGCTCTGAAGGCATCAACTGGCCATATATGGAGCTATACGACAAAATCTTTGAAGGCGACGAAGATTTTCACAGAAAATATCTAACTGACGAATATAGAATGATTGAAAGTGAAGCTATAGCAGAAACGGAACCTTCAAATCAAGTTGAAGACTGGAATACAACAGAAAAAACCGTTCTAGTTAAATACTGTTACGATTGCTTTGACGAGTTCGAAGATCCGACAATACCAAATAATTTCTTATGGAACGAAATTGGTAGATTACTTGACAAGACTGCTGATGCTTGCAAACAGAAATACCAAGATCTCAAAATCGAGCACTTAGACAAATATATAGAAGGTAGTTATAACCTCCGAAATAGGAACCCTATGGCTATATTATTTGATAATATAATATCTAAAGAAATACAGGTGGAAATAAGTAAGAACGTTAATAAGCCGGAGCATTTAGAAATTTGGAAGACGGATGAGTTAGATGAATTGGTTCAATTCTTCTATGATAACATAGAGATGTATAAAGACCTTATTTGTCACTTTGTGTGTTGGGCAGCAGTTATTAAAAAGTTAAAAAGGAATCTTCATAATTGTAGAAGCCAGTGGGAGGATCTTTTGGGTCTTTATAAAACTATTTTGGAAGATAAAAAGGAGAATCCAGATATGCAGATTGATTGGCGTTATATAGAAGTTTTTGATAGGATTTTTGATTACGGTATGGATGCTAATTTGTTGGATGGATATGAAACTACTAAAGATAGTAAACAACAGAAAAATAACAGTGGGAAGATTGGTGTTAAAAAAGTAATCATACATATCGATGAAGCTACTGAAGAATTCTCTGAAGATGAAGAATCTTTCGACGAACGTGGCTTTACCAAACGCACAAAACGTCGCTCCGGTGACTCCAAAGCTTTCAAAATCTTGGAATACTACCAGAAAAATAAAGACAAGTTCTCCACAACGAACAGAAACAAACATTCTCTATGGGAAGTGTTAGCTAAACAAATAGGTATATCAGCTACGCAGTGTGCACATAGATTCAGGAACCTAAAACAAGTTTACACAGCTTATGTTCAAAGGGAAATTAACAAACCAGAAATGCCAATACTCTGGCCGTACTACGCTCTATGCAAAAAAGTATTTGGCTACCGAGCAATAAAAAATAAGCTCAAAAACGGTAAACTTGATTCTGACGACAGTGAGGACTGGTCAGCTAAAGAAATAAAACAGCTAATCAATTACTTTGCTCAGAACTTGGACGATGAAAACGTGGATGATAACACAAAATGGACGGATTTAGCTGGTGAGATAGGTAAAAGCGAGAATTCTTGTAAGGAGAAGTTTTTGGAACTTCGTAAGTCTTATAGGAAGTTGAAGACTATGAAGAGTAGGAATTCTGATGTGAAGATATCTTGGAAGTACTTTGTTATGTTCGAGAAGATATATAGTGTTATGGAAGAAGGGAATGATGCTATGCAGGTAGATGATGAGCAGGAGACGTACTTGACCGTTGAGGGTTCTGATGAGAAGGCGGATCAAGAAGAAGATGACTACCAATGTATCATAGTTATACCAGAAGGACAAGACATATCACAGATAGACTCAGCACAGATTATAATACAAGGACCAGACCAACAGCAAGACCAAGAAATGACCGAAAATACATCGGATTACATCGAACAATCCGATCAAAATGGACAAACAGAAGTAAAAGAATCAAAACCACTGCTCAAATGGACAAAACGCTCCAAAAAGAGGCTTCTTATCTTCTACATCAATTACATAAGATCTCATAAAGGAAAAGAAATTAGCGCCAAAGAAATGTGGGCAGAAATTGCCGCGAAACTAGGCGACAAAACACCCTTATCCTGCAGAAAAATGATCGCGAAACTCAAAGCTAATCATAATAATAGCAAGGAAATTGATGAATTCAATCCTAATTCGAAGAAAACTCCATATTACACGTTAATGGAAAAAGTTATCCGTTTAAAACCGAAATTCATGAAAACGGACCAAAATAAGGCGTTGAAAGATGGAAAAATATACAAAGATGTTGTATTGCCTAATAATAAAGTAGAACAAGCCTTACAATATTATTTGGAAAACATCGAAGATTTTGTAAGCCCAAGGTATGAGAAAAAATACTTATGGACCGAACTAGCCAATTACGTTTGTGAGCCCATAACTAAAGTCTTCAACAAAATAAACTATTTAAAACAAGCATACAACTTAAATACAGATGAAATTGCCGGAGAGAAAACTCCCTTTTCTGACCTTCTGAAAAGTATTTTGGCTAGAGAAGAGGCTGTGAAACTTCTATTAGAAAATACACCAAAACCAGTCGTCGAAGATTCTGGAATTGAAGAGCCATGGACGGATGAGGAGACAGAACAACTACTAGAATGGTACCTAAGCAATTTAGACAAATTTAAGAACCCTAAATATGTTAGGACTTATCTTTGGATGGAAATTTCTGAATTGCTAAACAAAACCGCTATAACTTGTTCCAAGAAAATGTCTGAAATAAGGACGCAATACAGAACTATGGTGAGGGAAAGGCCAGATGAACTAAATCAATGGCGGTTCCTTAATTTGTGCCAGAAAATCTATGGAACAGGGAAAAAAGGGAAGTCAGATGAATGA
Protein Sequence
MDPIVVKTEMQSNGEILLFYVDENGGNEEGVLTTVESIENQAIQLQQDTSYIIPDDGVTNEIKIEQLHRDNWTEDQTKRLLVFYNDNKQTFITGSTKKNHLWTVACKTMLVGKNPNACEAKLQNLKSKYFEICGHIQKGVYVKWPYFELCHQIFHDESAVITVETLTTPPETQVIKVPALQPSYDNVMVVKKVNSRTKANENVETMLNLYLKYKKNFQQEYWRRGLWETIAMEIGEEDGEYWQKRFLNYKQHYLRLLDKRRLSGSEGINWPYMELYDKIFEGDEDFHRKYLTDEYRMIESEAIAETEPSNQVEDWNTTEKTVLVKYCYDCFDEFEDPTIPNNFLWNEIGRLLDKTADACKQKYQDLKIEHLDKYIEGSYNLRNRNPMAILFDNIISKEIQVEISKNVNKPEHLEIWKTDELDELVQFFYDNIEMYKDLICHFVCWAAVIKKLKRNLHNCRSQWEDLLGLYKTILEDKKENPDMQIDWRYIEVFDRIFDYGMDANLLDGYETTKDSKQQKNNSGKIGVKKVIIHIDEATEEFSEDEESFDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWEVLAKQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKNKLKNGKLDSDDSEDWSAKEIKQLINYFAQNLDDENVDDNTKWTDLAGEIGKSENSCKEKFLELRKSYRKLKTMKSRNSDVKISWKYFVMFEKIYSVMEEGNDAMQVDDEQETYLTVEGSDEKADQEEDDYQCIIVIPEGQDISQIDSAQIIIQGPDQQQDQEMTENTSDYIEQSDQNGQTEVKESKPLLKWTKRSKKRLLIFYINYIRSHKGKEISAKEMWAEIAAKLGDKTPLSCRKMIAKLKANHNNSKEIDEFNPNSKKTPYYTLMEKVIRLKPKFMKTDQNKALKDGKIYKDVVLPNNKVEQALQYYLENIEDFVSPRYEKKYLWTELANYVCEPITKVFNKINYLKQAYNLNTDEIAGEKTPFSDLLKSILAREEAVKLLLENTPKPVVEDSGIEEPWTDEETEQLLEWYLSNLDKFKNPKYVRTYLWMEISELLNKTAITCSKKMSEIRTQYRTMVRERPDELNQWRFLNLCQKIYGTGKKGKSDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01487655;
90% Identity
iTF_00185267;
80% Identity
-