Basic Information

Gene Symbol
-
Assembly
GCA_905146925.1
Location
LR989874.1:5092904-5097249[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.78 1.4e+03 0.0 0.2 1 15 69 83 69 126 0.69
2 7 0.0022 3.9 8.2 0.0 22 45 342 366 337 367 0.88
3 7 0.028 48 4.7 0.1 22 45 444 466 418 467 0.75
4 7 0.0023 4 8.2 0.2 22 46 578 612 566 612 0.74
5 7 4.6e-06 0.0081 16.8 0.2 3 45 663 712 661 713 0.86
6 7 4.6e-05 0.081 13.6 0.2 13 42 853 889 838 893 0.81
7 7 0.0029 5.1 7.8 0.2 2 16 1050 1064 1049 1110 0.65

Sequence Information

Coding Sequence
ATGGATCCAATAGTAGTGAAGACTGAAATGCAGAGTAATGGAGAAATATTACTATTCTATGTTGATGAAAATGGAGGCAACGAAGAAGGAGTTCTAACAACAGTTGAAAGCATAGAAAACCAAGCTATACAGCTCCAACAGGACACTTCTTACATAATACCAGACGATGGTGTCACCAATGAAATTAAAATAGAACAGTTACAAAGAGATAACTGGACTGAGGACCAAACCAAAAGACTCTTAGTATTCTACAATGATAATAAACAGACTTTCATAACAGGGTCCACTAAAAAGAATCACCTTTGGACCGTGGCTTGTAAGACCATGCTCGTAGGCAAAAACCCTAACGCTTGTGAAGCTAAACTACAAAGCTTAAAATCAAAGTACTTTGAAATCTGTGGGCACATACAGAAAGGAGTCTATGTAAAATGGCCATACTTTGAGCTCTGCCACCAAATATTTCACGATGAAAGTGCAGTTATAACAGTTGAAACATTGACAACCCCACCTGAAACTCAAGTTATTAAAGTCCCGGCTTTACAACCGACTTATGATAATGTTATGGTAGTGAAGAAAGTTAACAGTCGGACTAAAGCCAATGAGAATGTTGAGACGATGCTGAATTTGTATTTGAAATACAAGAAAAACTTTCAACAGGAGTACTGGAGGCGAGGGTTATGGGAAACTATTGCTATGGAAATAGGGGAAGAAGATGGTGAATATTGGCAGAAGCGGTTCCTAAACTATAAACAGCATTATCTAAGGCTGTTAGATAAGAGACGGCTTAGTGGCTCTGAAGGCATCAACTGGCCATACATGGAGTTATATGACAAAATCTTCGAAGGTGATGAAGATTTTCATAGAAAATACCTCACTGATGAATACAGAATGATTGAAAGTGAAGCTATCGCAGAAACTGAACCTTCAAATCAAGTAGAAGACTGGAATACAACGGAAACTACTGTTCTAGTTAAATACTGCTATGATTGCTTTGACGAATTTGAAGATCCGACGATACCAAACAATTTCTTATGGACTGAAATAGGTAGATTACTCGACAAGACGGCTGATGCTTGCAAACAGAAATACCAAGATCTCAAAAACGAGCACTTAGACAAGTATATAGAAGGTTCTTATAACCTCCGAAATAGGAACCCAATGGCTATATTATTTGATAATATAATATCTAAGGAGATACAGTTGGAAATAAGTAAGAACGTTAATAAGCCTGAACAATTAGAGATTTGGAAGACAGATGAACTAGATGAGTTGGTTCAATTCTTTTATGACAACATAGAAATGTATAAGGATCTTATTTGTCACTTTGTGTGTTGGGCAGCGGTTATAAAAAAGTTGAAAAGAAACCTTCATAATTGTAGAAGCCAGTGGGAAGATCTTTTGAGTCTTTATAAAACTATTTTGGAAGATAAAAAAGAGAATCCTGATATGCAGATTGATTGGAGATATATAGAAGTTTTTGATAGGATTTTTGATTATGGTATGGATGCCAATTTGTTGGATGGATATGAAACTAACAAAGATAGTGAACAGCAGAAAAATAGTGGGAAGATTGGTGTGAAAAAAGTAACCATAAAAATGGATGACGCTATTGAAGAATTCTCCGAAGATGACGAATCTTTCGACGAACGTGGTTTCACGAAACGCACAAAACGCCGCTCCGGAGACTCCAAAGCCTTCAAAATACTAGAATACTATCAGAAAAATAAAGACAAGTTCTCCACAACGAACAGAAACAAACATTCTCTATGGGAAGTGTTGGCTAAACAAATAGGTATTTCAGCTACACAGTGCGCCCATAGATTCAGGAATCTAAAACAAGTCTACACAGCTTATGTCCAAAGAGAGATCAATAAGCCAGAAATGCCAATACTCTGGCCATACTACGCTCTGTGCAAAAAAGTATTTGGCTACCGAGCAATAAAAAACAAGCTCAAAAACGGTAAGCTCGATTCAGACGACAGTGAAGACTGGTCCGCTAAAGAAATAAAACAACTAATCAATTACTTCGCTCAAAACTTGGACGATGAGAATGTAGATGATAACACAAAATGGACGGACTTAGCTGGAGAGATAGGTAAAAGCGAGAATTCTTGTAAAGAAAAGTTTTTGGAACTTCGTAAGTCTTATAGGAAGTTGAAGACGATGAAGAGTAGGAACTCTGATGTGAAGATATCTTGGAAGTATTTTGTTATGTTTGAGAAGATATACAGTGCTATGGAAGAAGGGAATGATGCTATGCAGGTAGATGATGAACAGGAGACGTACTTGACTATCGAGGGTTCTGATGAGAAGGTGGAGCAAGAAGAAGATGACTACCAATGTATCATAGTTATACCGGAAGGTCAAGACATATCACAGATAGACTCAGCTCAGATTATAATACAAGGCCCAGACCAACAGCAAGACCAAGAAATGGCCGAAATTACATCGGATTACATCGAACAAACCGACCAAAACGGTCAAACAGAAGTAAAAGAATCAAAACCACTCCTGAAATGGACAAAACGCTCCAAAAAGAGGCTTCTTATCTTCTACATCAACTACATAAGATCTCATAAAGGTAAAGAAATAAGCGCCAAAGAAATGTGGGCAGAAATTGCCGCGAAATTAGGCGACAAAACACCATTATCCTGCAGAAAAATGTTCGCGAAACTCAAAGCTAATCATAATAATAGCAAGGAAATTGATGAATTCAATCCTAATTCGAAGAAAACTCCCTATTACACATTAATGGAAAAGGTAATTCGTTTGAAACCGAAATTCGTGAAAACTGACCAAAATAAGGCGTTGAAAGACGGAAAAGTTTACAAAGATGTTGTATTGCCTGATAATAAAGTAGAACAAGCTTTACAATACTATTTAGAAAACATTGAAGATTTTGTAAGCCCAAGGTACGAGAAAAAATACTTATGGACCGAACTCGCAAACTATGTCTGTGAGCCTATTACTAAAGTCTTCAACAAAATAAACTATTTAAAACAAGCATACAACTTAAATACAGATGAAGTTGCCGGAGAGAAAACACCATTCTCTGACCTTCTAAAAAGTATTTTAGCTAGAGAAGAGGCTGTGAAACTTCTATTAGAAAATACACCAAAACCAGTCGTTGAAGATTCTGGGATTGAAGAACCTTGGACTGATGAGGAGACAGAACAACTACTAGAATGGTACCTAAGCAATCTAGACAAATTCAAGAACCCTAAATATGTTAGGACCTACCTTTGGATGGAGATTTCTGAACTGCTAAACAAAACCGCTATAACTTGCTCTAAGAAAATGTCTGAAATAAGAACTCAATACAGAACTATGGTGAGGGAAAGACCAGATGAATTGAACCAATGGCGGTTCCTAAATTTGTGTCAGAAAATTTATGGCACAGGGAAAAAAGGCAAGTCCGACGAATGA
Protein Sequence
MDPIVVKTEMQSNGEILLFYVDENGGNEEGVLTTVESIENQAIQLQQDTSYIIPDDGVTNEIKIEQLQRDNWTEDQTKRLLVFYNDNKQTFITGSTKKNHLWTVACKTMLVGKNPNACEAKLQSLKSKYFEICGHIQKGVYVKWPYFELCHQIFHDESAVITVETLTTPPETQVIKVPALQPTYDNVMVVKKVNSRTKANENVETMLNLYLKYKKNFQQEYWRRGLWETIAMEIGEEDGEYWQKRFLNYKQHYLRLLDKRRLSGSEGINWPYMELYDKIFEGDEDFHRKYLTDEYRMIESEAIAETEPSNQVEDWNTTETTVLVKYCYDCFDEFEDPTIPNNFLWTEIGRLLDKTADACKQKYQDLKNEHLDKYIEGSYNLRNRNPMAILFDNIISKEIQLEISKNVNKPEQLEIWKTDELDELVQFFYDNIEMYKDLICHFVCWAAVIKKLKRNLHNCRSQWEDLLSLYKTILEDKKENPDMQIDWRYIEVFDRIFDYGMDANLLDGYETNKDSEQQKNSGKIGVKKVTIKMDDAIEEFSEDDESFDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWEVLAKQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKNKLKNGKLDSDDSEDWSAKEIKQLINYFAQNLDDENVDDNTKWTDLAGEIGKSENSCKEKFLELRKSYRKLKTMKSRNSDVKISWKYFVMFEKIYSAMEEGNDAMQVDDEQETYLTIEGSDEKVEQEEDDYQCIIVIPEGQDISQIDSAQIIIQGPDQQQDQEMAEITSDYIEQTDQNGQTEVKESKPLLKWTKRSKKRLLIFYINYIRSHKGKEISAKEMWAEIAAKLGDKTPLSCRKMFAKLKANHNNSKEIDEFNPNSKKTPYYTLMEKVIRLKPKFVKTDQNKALKDGKVYKDVVLPDNKVEQALQYYLENIEDFVSPRYEKKYLWTELANYVCEPITKVFNKINYLKQAYNLNTDEVAGEKTPFSDLLKSILAREEAVKLLLENTPKPVVEDSGIEEPWTDEETEQLLEWYLSNLDKFKNPKYVRTYLWMEISELLNKTAITCSKKMSEIRTQYRTMVRERPDELNQWRFLNLCQKIYGTGKKGKSDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01487655;
90% Identity
iTF_00186134;
80% Identity
-