Asol001324.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aulacorthum solani
Gene Symbol
BTBD9
Assembly
GCA_008528875.1
Location
PVMI01072137.1:1-7330[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.9e-26 3.7e-23 82.8 0.1 5 108 103 207 99 209 0.94
2 2 7.2 3.4e+03 -0.8 0.0 82 107 213 238 207 241 0.81

Sequence Information

Coding Sequence
ATGTGTTTAGCACGGTGCACATTCGTAGTCCGGTCGTTGGTcagacaacaacaaaaaaatcgcCATCACCACCATCGACGCAACTTGGAACTAAACTCGGAGGAGATGAcaGCGTACGGACCCTTGTTCTACACTCACCGTAGTGGTGCGATGAGCGGTCAACATTTGGCAGATGGTGCGGTCGACACCAACAATGGAGTAAATCATAGTCCAGTTGACACTAAATCACCTACGTCTATTGAAAAACAACACAGTTACGAGCAAATCGATCATGCTCATTTTTTGGCTAATGACATCGGCACTCTTTATCTCAATGACAgGTTTTCTGATGTTGTGTTGGTAGTGAATGGTGAACGTTTCCATGCTCACAGGGTGGTGTTGGCGTCAAGAAGTgattattttagagCGTTGCTGTATGGTGGTCTCAAAGAATCTCATCAACCAGAAGTGAAAATTACTGAAGCTTCGacaaattcatttaaaaaacttctTGAATATATTTACTCGGGACGCATGaacttaagtatattaaaggatgaagttattttagaaatatttagtctttccaatttatttggttttaccAATTTGGAACTATCGCTCTGCAAGTATTTACGCAGTAATatcaatgtttataatgtgTGCTCCATGTTTGCTGCAGCACGTTTATATCAGCATAAAGAGTTAGTTACTGAAGCGTTGAACTTTACAGACTACCATGCATTGGAAGTACTTCAATCTGAAGCATTTTTATCTCTTTCATCCgaAGCACTTCAAGAAGTACTTAATAGAGATTCATTGTATGCTTATGAATTGGATATATTTCGGGCGGTTTGTCGTTGGATTAAGGCTAATCAAGATGATGAAGATCCTGaggttaaaattaaagtgttaTCTGCTGTCAGATATCCCCTGATGAGCCTGGATGAATTGCTTTCCGTTGTGAGGGAATCACAACTTGTAAGCtctgataatattttggatgCCATACAACTACGAAATACATTACCTTCACATAAACTCAAATTTAGAGGACAGCTAAaacctaatttaaatattgctcATCCTTCACAAGGCGCTCAGGTAATGCAGGGAGAAATGCGTTCAGCATTATTGGAATCTGATTCTAGTGGTCATGATCATGAGCGGGGCTGTACTAGgcatataattaatgaaagcGACAGCGGTATTATGATAAAGCTTGGTCATccttcaattattaattttataaaaatgcaacTATGGGATAAGGATCTCAgGTCCTATTCTTATTACATTGAGGTATCAATGGATCAGCATGATTGGGTGCGTGTTATTGatcattcaaattattattgtcgttcaACACAGCGTTTGTGGATAGAACCTCGAGTAGTGCAATACATTCGTATTGTGGGTACTAATAACACTGTCAATAAATGTTTCCATACAGTGTCAAtggaaataatgtataattccGAAGAAATGCATTTAGTAGACATTGAAAAAGGATTAGTAgtaccaaaatataatgttgctACGATGGCCATGAATGCTATTGTGATCGATGGAGTGAGTCGTTGTCGAAATTCATTATTGGATGGCAACTCTAAAGATTATGACTGGGATTGTGGATACACGTGCCATCAATTGGGTTCTGGATGTATACTTGTTCAACTTGGTCAACCCTATATGCTTAGTTCAATGAGaatgcTACTTTGGGATTGTGACGAccgttattatagttattatgttgAAGTGTCAGTTAACATGTGGGATTGGGAATTGATTGTCGACAAATCAAAAGAGCTAGTTCGATCTTGGCAACTTTTGCAGTTCAACTCTCGGCCCGTTGTATTTATTCGTATAACTGGAACATATAATTCAGCTAATGAGGTAGGCCAGGTTTTTCACTGTGTTCATCTAGAGGCACCGGCTCAGGTTCCATTAGACTTAAATACAGTTGAAGTCGAACaggaaatttcaaatttacaaGTAACCAAAAAAGta
Protein Sequence
MCLARCTFVVRSLVRQQQKNRHHHHRRNLELNSEEMTAYGPLFYTHRSGAMSGQHLADGAVDTNNGVNHSPVDTKSPTSIEKQHSYEQIDHAHFLANDIGTLYLNDRFSDVVLVVNGERFHAHRVVLASRSDYFRALLYGGLKESHQPEVKITEASTNSFKKLLEYIYSGRMNLSILKDEVILEIFSLSNLFGFTNLELSLCKYLRSNINVYNVCSMFAAARLYQHKELVTEALNFTDYHALEVLQSEAFLSLSSEALQEVLNRDSLYAYELDIFRAVCRWIKANQDDEDPEVKIKVLSAVRYPLMSLDELLSVVRESQLVSSDNILDAIQLRNTLPSHKLKFRGQLKPNLNIAHPSQGAQVMQGEMRSALLESDSSGHDHERGCTRHIINESDSGIMIKLGHPSIINFIKMQLWDKDLRSYSYYIEVSMDQHDWVRVIDHSNYYCRSTQRLWIEPRVVQYIRIVGTNNTVNKCFHTVSMEIMYNSEEMHLVDIEKGLVVPKYNVATMAMNAIVIDGVSRCRNSLLDGNSKDYDWDCGYTCHQLGSGCILVQLGQPYMLSSMRMLLWDCDDRYYSYYVEVSVNMWDWELIVDKSKELVRSWQLLQFNSRPVVFIRITGTYNSANEVGQVFHCVHLEAPAQVPLDLNTVEVEQEISNLQVTKKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01346559;
90% Identity
iTF_01038529; iTF_01033118; iTF_01032263; iTF_00941771; iTF_01167789; iTF_00463454; iTF_00136255; iTF_00973162; iTF_00134610; iTF_01304973; iTF_01329100; iTF_01305773; iTF_01304314; iTF_00019374; iTF_01330717; iTF_00308945;
80% Identity
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