Basic Information

Insect: Augochlorella aurata
Gene Symbol: -
Assembly: GCA_028455555.1
Location: CM052147.1:2289878-2297935[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 5.7e-06 0.00047 20.4 1.0 1 23 218 240 218 240 0.98

2 29 0.0074 0.6 10.6 3.6 1 23 263 286 263 286 0.96

3 29 0.00012 0.01 16.2 0.5 2 23 293 315 292 315 0.96

4 29 0.0091 0.74 10.3 1.0 2 21 337 356 336 357 0.92

5 29 0.0031 0.25 11.8 0.1 2 23 454 475 453 475 0.94

6 29 0.0027 0.22 12.0 0.6 1 23 481 504 481 504 0.92

7 29 0.00011 0.0088 16.4 0.1 1 23 570 593 570 593 0.96

8 29 0.022 1.8 9.1 0.4 1 23 599 622 599 622 0.96

9 29 0.057 4.6 7.8 0.8 1 23 635 657 635 657 0.97

10 29 3.3e-05 0.0027 18.0 0.9 3 23 701 722 700 722 0.96

11 29 0.0012 0.099 13.1 1.0 2 23 782 805 781 805 0.95

12 29 2.9 2.3e+02 2.5 0.0 2 23 814 836 814 836 0.84

13 29 0.063 5.1 7.7 0.1 2 23 843 865 842 865 0.95

14 29 1.2e-05 0.00097 19.4 1.2 1 23 873 895 873 895 0.98

15 29 1.2 95 3.7 2.9 2 23 922 945 921 945 0.94

16 29 0.00019 0.016 15.6 3.3 1 23 948 971 948 971 0.97

17 29 0.00057 0.047 14.1 0.6 2 23 978 1000 977 1000 0.96

18 29 0.00084 0.068 13.6 3.9 1 21 1024 1044 1024 1045 0.95

19 29 0.0025 0.2 12.1 1.8 2 23 1059 1080 1058 1081 0.93

20 29 0.4 33 5.1 1.4 1 23 1084 1107 1084 1107 0.94

21 29 0.035 2.8 8.5 1.0 2 23 1114 1137 1113 1137 0.89

22 29 2.8 2.3e+02 2.5 0.2 2 23 1145 1167 1145 1167 0.94

23 29 0.21 17 6.0 2.7 2 23 1205 1227 1205 1227 0.96

24 29 2.8 2.3e+02 2.5 0.1 2 23 1233 1255 1233 1255 0.94

25 29 6.5e-05 0.0053 17.1 0.2 1 23 1318 1341 1318 1341 0.96

26 29 0.049 4 8.0 2.0 1 21 1366 1386 1366 1387 0.93

27 29 0.45 37 5.0 1.3 2 23 1488 1510 1487 1510 0.94

28 29 0.15 12 6.5 0.6 2 23 1517 1539 1516 1539 0.94

29 29 4.4 3.5e+02 1.9 2.6 1 23 1550 1572 1550 1572 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	5.7e-06	0.00047	20.4	1.0	1	23	218	240	218	240	0.98
2	29	0.0074	0.6	10.6	3.6	1	23	263	286	263	286	0.96
3	29	0.00012	0.01	16.2	0.5	2	23	293	315	292	315	0.96
4	29	0.0091	0.74	10.3	1.0	2	21	337	356	336	357	0.92
5	29	0.0031	0.25	11.8	0.1	2	23	454	475	453	475	0.94
6	29	0.0027	0.22	12.0	0.6	1	23	481	504	481	504	0.92
7	29	0.00011	0.0088	16.4	0.1	1	23	570	593	570	593	0.96
8	29	0.022	1.8	9.1	0.4	1	23	599	622	599	622	0.96
9	29	0.057	4.6	7.8	0.8	1	23	635	657	635	657	0.97
10	29	3.3e-05	0.0027	18.0	0.9	3	23	701	722	700	722	0.96
11	29	0.0012	0.099	13.1	1.0	2	23	782	805	781	805	0.95
12	29	2.9	2.3e+02	2.5	0.0	2	23	814	836	814	836	0.84
13	29	0.063	5.1	7.7	0.1	2	23	843	865	842	865	0.95
14	29	1.2e-05	0.00097	19.4	1.2	1	23	873	895	873	895	0.98
15	29	1.2	95	3.7	2.9	2	23	922	945	921	945	0.94
16	29	0.00019	0.016	15.6	3.3	1	23	948	971	948	971	0.97
17	29	0.00057	0.047	14.1	0.6	2	23	978	1000	977	1000	0.96
18	29	0.00084	0.068	13.6	3.9	1	21	1024	1044	1024	1045	0.95
19	29	0.0025	0.2	12.1	1.8	2	23	1059	1080	1058	1081	0.93
20	29	0.4	33	5.1	1.4	1	23	1084	1107	1084	1107	0.94
21	29	0.035	2.8	8.5	1.0	2	23	1114	1137	1113	1137	0.89
22	29	2.8	2.3e+02	2.5	0.2	2	23	1145	1167	1145	1167	0.94
23	29	0.21	17	6.0	2.7	2	23	1205	1227	1205	1227	0.96
24	29	2.8	2.3e+02	2.5	0.1	2	23	1233	1255	1233	1255	0.94
25	29	6.5e-05	0.0053	17.1	0.2	1	23	1318	1341	1318	1341	0.96
26	29	0.049	4	8.0	2.0	1	21	1366	1386	1366	1387	0.93
27	29	0.45	37	5.0	1.3	2	23	1488	1510	1487	1510	0.94
28	29	0.15	12	6.5	0.6	2	23	1517	1539	1516	1539	0.94
29	29	4.4	3.5e+02	1.9	2.6	1	23	1550	1572	1550	1572	0.92

Sequence Information

Coding Sequence: ATGGAGCCCAGGGAACGCTATCAGGAGCTCTGCAGACTTTGCGCATCCTACGACGCCGTCAAGATGGACATCTTCGGTCAAGAGGGCAAGAATAGACAGCTTGTTGACAAGATACAAGCTTGTCTACCGTTTAAGATTTCAGAAGATGATCGTCTACCAAAATGCCTCTGTTATCGATGCATGTACAATTTGGAAAATTTCTATGATTTTAGAACAGCATGTGTCAATGCAGTGGCTCTCTTGGAAAGATGCTTACCACCATCAGAAAAAGTTGAAGGTATTACAACCACCTTAAGATGCTGCGATAACTCAGAGCTCTTGAAGCGAAAAGAAAACATACCTATATTGATCCCAGAGGCACCTATTGTGAATCCCAATGCTGCCTTAGGCACACCACCTAGATTAAATTCTGATGAGGAAGCAGATCACGAATCAGAAGAAATTATTGATAATAGTTTCACAGATGAAGCAACAATAGTGGATGACTCTGAGGATCACCCGTCAGAAGAATATGAAATGGATATGGAAACAAATCCAAGTGATTTCCTGGAGATGACTTCAATAGTTACTGAAGAACCTGAAGACCCAGAGCTGAAACATCAGGAACATTCTAGTAGTAACCCAGAACATGCATCTCAACAACACGAAGTTTATGTCTGTTCCTTGTGCAACAAAGCATTCAGTTCAAAGGGCCACTTATCTTTGCATGCGCGTATTCATGTCGGGGCCGGTGACGTAATTGGCGAAAAAGTTCTTACGGATGACCATACTTCCTACAAGAGACCGTACCAATGTGATCTTTGTCATAAATCTTATTCGACTGCGAAGCATCGTTGGGGTCATGTTTCAACGTCTCACAGAGGCCATCCGGCAGTGACATGCGGTTATTGTTCCCGGATCTATTCAACTCGAACAAATTTGGAAGAACATATAAAATCACGTCATGCTGGTCTTCCAGCACCCTTGGAAGTTCCTTTGAACAATACCTATCGACCTGAAAATAGATGCCAGTGCAATGTTTGTGGAAAGATTTGCACTGATACCATGGAATTGAATCTTCATGGCAGAGTTTGTATCGAAGCGCAAAAATCCGATTTTGTAGCTAAGAGTGAGAACAAAGATACCAAAATAGTAGACAGTTGTGAAGGATCATCAAGCATTGGTAGTGATGACGATAGCAAAGATTATAGAAGTGCAGAAGCAAAGCTGGCTAAAAATCCACAATTAACAATCTTGAAGCAAGCACTAATGAAAGGTGACAGTCTTAAACGAGACTTTGAAGATAAATTCACGACAAATTGTAAACCAAAAAAACTGCCAAAAACAGAAAACACGGATGTTAAGAATGATAAGAAGTGGTACTGTGAATTGTGTCCTCAATTTTTTACATCAGTCGAAAATTTGAAAGAACATGAGGCAGTACATGATGCCGACAAGCCGTACATCTGTATTCTATGCAAAAAAGATTTTGTTCTTAAGTCTTCCTTGAGTAGACATATTCAAACGTTACATGGTGTTGATCCATATCCTATTGTAGAGAGTGATAAATGTTTAAAGAAGATTGTCTCACGACATTGGAATGAACAAATGGATCTTGATTATGAACAAAAAACTAATGAGTTTCCATTATCTCCGGAAACAAATGTTGAAAATGAAGAAGATGATCACGAGAGTGGACAAGAAAATCTTATTGAAATTGAAACCGTATTTGTTTGTGAAATTTGTACCCGTGATTTTAATGATCGTGCTTCTCTTTGGCTTCACATTCGAGCCACTCATAAGGAATTCGCAGCATTTGCATGTGGCGTTTGTTTGAAAATCTGTGCAGACAATACACAACTTCTAAATCATGTAAATATGTATCACGGTGGATCAAAATTGTTACTCTCTGAACAAAGGAGGTACAGTTGCACAATTTGTGGCAGACAACATGACTCTAGGAAGAAATTAATTGCACACGTATCCATACATAACATTGACCAAAATTATGATCCAGCAACTTTCGTACAATTGAACAGTAATTATTATGGGGAGAATGTTAATGGAAATGAAACTACAGAAACAATGCTCGATTATGAAGAGGAAGGAGACAAAGTAGACTGTTACATTTGTTATAAGTCATTTCCAAACGAAGATCATTTAATACGGCATCAAAGAAATGCACACAGATCTGAACAACCAATACCAACAGGGGACTCGATGAATCAGTCTAATTTAAATGGTGGTGGAAATAGAGCCCAATATCACTTGTTCTTTGTTTGCGAACTTTGTGGCAGTTCACATCCTAGTAAATGGGAACGTTGGTTACATGTCAGCTCTGTTCATGCCAATGAACCAGCCATAAAATGTGATCGTGATGATTGTGGTAAAATATTTGCAACAAAATCTCTTAGAAACGATCACATTCAACATCATATAATTCAGGGTCCCTCCCCAAACACTTGTGAAATCTGTGGTAAACTTTGGGGTAGTAGAGTAGATTATTGGAAGCATGTTATGGGCGTTCATTCAGATACTGTTCCATTGATTTGTGGTGTTTGTCTGAAAGTTTTTCCGAATGTATTACAATTAAGTAATCATGTCAAATCGAAACATTGGCCGTTAACAAATGGTGATTTTAGTTGTGATATATGCGGAAGACCGTATTCGAACAAATCTAAAATGTCTAGGCATAGAAAAATTCATGGTTTTGAAGAAACTTGCGACAATGGAGTTGAAGGTAATGAAAGCAAACAAGATGGGAGAATTAGGGAAACAGAATTAAGTTGTGAACATTGTACAGACTTAAAGTTTGCTAGTTTAGAGAAGTTATGTAATCACAGACGAATCGTTCATGGCCTTTTCCCTTGCGACCTCTGTAATAAATGTTATGGAAGAACCTCACACCTATGGAAACATGTTAATAGAGTCCATAAAGGTCATGAGGATGTTACATGTCCTTATTGCTTAAAAACTAGCGCATCAAAAGATCATTTGGCAACACATATTTCTAAAATTCACAGGTACGAACCTGATTCTAGAAAAGATGGTAAAGACACTAGACAATTTAAAACTGACGAAGTTAGTTTACATTACTGCGAGAAATGTAATAAAGGATTTCATAAGCGATATCTGTTACGTAGGCATATGAAAGGATGTCAGAATTACAGGAAGGATCCTGGTGCGTTGCTTACTCGATGTAGAGCTTGCGAAAGAATCTTTAAAGATCGTGCTAGTTTACAAAAACATATTGAAAATCATCATAGTACATACACATGTCATCTTTGTAACGAAACTATCACTTCAAAATTGGGAATTATGACGCATAATAGAGTGAAACATATGGATCATCCGGATTTGACTTGTAATTTTGGAGCTTGTAAAAAGTTATTCAGGACAAAGGAAGATTTAGAATCGCATAAAAAAGACCACAGATATCATACAAATCCTAACGTTTGTGATTTCTGTGGTGACACTGTTGAGAATAAATTGAAATTGAAGATGCACGTGCTGTCTCTTCATCGTAATGAAATTGGAGTATCTTGTGGTGTATGCTTAATTCCAATGAAAGATCCGAAAGAACTTAAAGGTCATGTAGAAGAAGTTCATGCTAGTGTTCTTTCGAAACCTAATACTTGTCAAGTATGTGGTAAACAATATGCTTCAAAATGGAAAGCTTTTGACCATACTAAAAAGTGTCATGGCAAAGTATTCCGGACGTGTAAACAATGTTTAGCAGTTTTCACAGAAGATTCTGCTATTAGAGATCATTATGAAATGGTACATAATGTTCCGAAAGATCAACTTGCAGCATTTGAGTACAGGTTGGACATTGGATCGAAACATGACGATTTCGAAATGGAGTCTCCTGACGTTATCGTCAAAGAAGAACCAGATGATTTGGAGTATGATGTAGATCTGTGTGATGAGGACTCCAGTGATTCAAAAAGAAGAAGATCAATGACTGATACATTTGACTGTGAAATGTGTCCCGAAATGTTTGCGAATAGTGATGCTCTTTCTAAGCACTATCGTAATATGCATAATACAGATCCAGAAAGAATGTTTAAGAGACTGAAGCAAGAAGAGCAAAGAAGAATGCGTGGAAAAATAAGTTTTGCTTGTAAGAACTGTAAAAGACAATTTTGTACAAAAACAGTGTATTGGAACCATATTGCAACTTGTAGAAGAAATACTTTCCGAAAAGAGGAAGAACTTGCGTCTTTGCAGAATGACATGTTAGATAATCAAGAGGATAACAGAGAAGAAATTTTGAAAAATAACAATCAAATAAAAAAGGAAGAAAGTACATCAAATTTGAATATCCCTGACTTTAATCTATTTGAAGACATAAATCTTCAATTATCAGGTCAAAGACCTCTTCCAAATCTGATGCCATTATCTCAAAGAGTAAAAACAACAATGAAATGTTCAAGAAAAGACTCTAGGAAAGTTTACGATGAATCGACGAATACAGAATGTGCTTGTGAAGTCTGCGGAAAACAGTGGCCGGCAAAGAAACATTTATGGCAACATTTAATTCGCTTTCATCGAGCAGAAGCTGCAGTCACTTGTGGAGTATGTTTGAAACTCTGCAAGGATTATGATAATTTAGCAGAACATTTGAAAGATACGCATGCTGCAATTCTTTCTTGTGAAGGAAACAATTTTACGTGCAAAACTTGTGGCAGATATCACAATGCACGCAGTAAGCTGTTATTACATACAAGTATTCATATTGGTCATGCAAGTAATGGCACTACATGTCCGAAATGTTACAAGAATATTACTGATGAAACTGATCATTCTAATACATGCACTGGAAAAACAGAAGAACAACACTTGAAGACTGAGGAAAAACCAGAAGGGAGCCTGATAGCAGATGACGCAATGATAGAAGAGGTGGAGGAAGGGGATTTTGAATCTGAGGCAGAAGAGGCAGATTCAGCAGAATCAGATAGTGGTAGTAGTACGGAGGTGGAAGAAGAAAATGATTCTGAAGGAGAATCCAGGGCTACAGAAGAAATTACATACAACTCGGATACTGATGATTCCGAAGAATTGGCTTTAGAAGGCCTCCAGGAATCCAAAGATACAGAAGCAGGAAAAAATGACGGTGATTTGTCAGATGATGACGGCCCCCCCGTGCTCAGTCCTATAATGCCTCTACTAAGTGGAAATATGTCTGGAGAACAGTCGATAAGTCACAAACTTGGATCGAGAACGACGACAATGGAGAAAGAAGTAGAAATTTGTAATTTAGCAGAAATTCAAAATCAATCTTCCTCAAAATCAGTGAATTTCTATGGAAAGGATTTATGTAACAATGAATCCTTAGATTTTGAGTCCGAAACGTTTATAAATCGAAGCGACGAAGAATACGAAGATACGAAAAATGGATACGATGAAAATTCTATGGAAGAAAACGAGGACGAAAATGAAGAGATTGTAGATAATGATGAAGCAGTAGAGAATGAAGAACATGAAGAAAACGGAGAAATTGAGCAGGACGACGAAAATGAGGAAAATGAGGAAAACGTGGAAATAAACGAAAACAGTGAAGGAAATGAATTGTATGAAGAAACCGAAGAGAATGAATCAAATGAAGAAATCGAAGATAATGAAGACAATGACGAACATGAAGAGAATTATGAGAATGAAGAAAATGAAGACAGCGAGGAAAATGAAGAAAACGAGGAAAAGGTCGAAGGCATGCAACTGGATGATTTGGAAAATGCTGTACTAATGGTGACCGAAGGAAATGAAATATTAATACAACAAGATATATTAGAAGATGGAATTGAAAATGTAAATCAAGCATACGTTTATTCTACGCTTGCTTATAGTACGGATGAAGACAGTGATGATGCAGGAAAATGA
Protein Sequence: MEPRERYQELCRLCASYDAVKMDIFGQEGKNRQLVDKIQACLPFKISEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPSEKVEGITTTLRCCDNSELLKRKENIPILIPEAPIVNPNAALGTPPRLNSDEEADHESEEIIDNSFTDEATIVDDSEDHPSEEYEMDMETNPSDFLEMTSIVTEEPEDPELKHQEHSSSNPEHASQQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVLTDDHTSYKRPYQCDLCHKSYSTAKHRWGHVSTSHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPAPLEVPLNNTYRPENRCQCNVCGKICTDTMELNLHGRVCIEAQKSDFVAKSENKDTKIVDSCEGSSSIGSDDDSKDYRSAEAKLAKNPQLTILKQALMKGDSLKRDFEDKFTTNCKPKKLPKTENTDVKNDKKWYCELCPQFFTSVENLKEHEAVHDADKPYICILCKKDFVLKSSLSRHIQTLHGVDPYPIVESDKCLKKIVSRHWNEQMDLDYEQKTNEFPLSPETNVENEEDDHESGQENLIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICADNTQLLNHVNMYHGGSKLLLSEQRRYSCTICGRQHDSRKKLIAHVSIHNIDQNYDPATFVQLNSNYYGENVNGNETTETMLDYEEEGDKVDCYICYKSFPNEDHLIRHQRNAHRSEQPIPTGDSMNQSNLNGGGNRAQYHLFFVCELCGSSHPSKWERWLHVSSVHANEPAIKCDRDDCGKIFATKSLRNDHIQHHIIQGPSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSNHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGFEETCDNGVEGNESKQDGRIRETELSCEHCTDLKFASLEKLCNHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCPYCLKTSASKDHLATHISKIHRYEPDSRKDGKDTRQFKTDEVSLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVKHMDHPDLTCNFGACKKLFRTKEDLESHKKDHRYHTNPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKELKGHVEEVHASVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTEDSAIRDHYEMVHNVPKDQLAAFEYRLDIGSKHDDFEMESPDVIVKEEPDDLEYDVDLCDEDSSDSKRRRSMTDTFDCEMCPEMFANSDALSKHYRNMHNTDPERMFKRLKQEEQRRMRGKISFACKNCKRQFCTKTVYWNHIATCRRNTFRKEEELASLQNDMLDNQEDNREEILKNNNQIKKEESTSNLNIPDFNLFEDINLQLSGQRPLPNLMPLSQRVKTTMKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKDYDNLAEHLKDTHAAILSCEGNNFTCKTCGRYHNARSKLLLHTSIHIGHASNGTTCPKCYKNITDETDHSNTCTGKTEEQHLKTEEKPEGSLIADDAMIEEVEEGDFESEAEEADSAESDSGSSTEVEEENDSEGESRATEEITYNSDTDDSEELALEGLQESKDTEAGKNDGDLSDDDGPPVLSPIMPLLSGNMSGEQSISHKLGSRTTTMEKEVEICNLAEIQNQSSSKSVNFYGKDLCNNESLDFESETFINRSDEEYEDTKNGYDENSMEENEDENEEIVDNDEAVENEEHEENGEIEQDDENEENEENVEINENSEGNELYEETEENESNEEIEDNEDNDEHEENYENEENEDSEENEENEEKVEGMQLDDLENAVLMVTEGNEILIQQDILEDGIENVNQAYVYSTLAYSTDEDSDDAGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00218574;
90% Identity: iTF_00966151;
80% Identity: -