Aaur001759.1
Basic Information
- Insect
- Augochlorella aurata
- Gene Symbol
- bab1
- Assembly
- GCA_028455555.1
- Location
- CM052159.1:75706-77538[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-15 5.4e-12 45.1 0.1 3 45 371 413 369 413 0.92
Sequence Information
- Coding Sequence
- atggcgagcacgtcgcagcagtattgtctgcgctggaacaaccaccgttcgaacctgctgacggtgttcgatgagctgctgcagaacgaagcgttcaccgacgtaacgttggcggtggacggcggtgcctcggtcaagtgtcacaaaatggtgctggcagcctgttcctcctactttcaaacgttgtttatcgacctgccctgcaaacatccgatcgtcgttctgaaagatgtcaagtactcggagatcaaggcgattctcgagtacatgtaccggggcgaggtgaacgtggcgcaagagcagctggccggactgctaaaagtcgccgaggtgttgaaggtgaagggcctggtggaggagaacggctccggttcgtcgtcgcaaggtcgccgggccggggtcgaggaggcggagacgtcgatgtcgcccccgccggcgatcagcacgagcacgaccagcagcgcggctcagagcagcggtcacgCGTCGCCCCCGCACTCGACGGCCACTTCGTACAGCGTCTACGGGAAGTCGTCGGACAGAGGCGTGAACCGGCTGCCGTTGCACATGTGGCAACTATCGGGGCTGCCGATCCCTCACACGGGCTCGAACCATCAGGCGGCGCCGTCCCATCATTCCCAGCACTCGCAGCACTCGCAGCATTCCCAGCACGCCCAACAGACCCAACATTCCCAGCATTCGATTCTGTCCGGCTCCTACGACAACGGATACGAAACGTCGCCACTGAAACGGAAGAAGCTCTCGAACATATTGATGAACCGGGACACGCCGATCCTCAGGACGGTCCTCGGCCAGGGCCACGCGGACAGCTCCCAAGGCATCCCTCTGTTGCATCCGGACAGTCACGAGAACAACCACTTTCGTAACAGCAGCAGCAACGGCTCGTCCCACGAACACGACAGGCGGAACAGCGAAGACATCTCGACTCAAGGGGAGCCCGCTCACAGCCCCTACACGGACGTGTCCATGATGGACGAGGACGATAAGCAACCTTCGCCGCAGTCGTACCCCGGGGACGCCAAGTCAGGAATCGTGAATTACGTTCCAACGCAGAAGCCCGAGTGGAAGCGGTACAAGCAGTATACGCGAAACGACATCATGTCCGCGATCGAGGCGGTACGTTCGGGAATGAGCGCGTTGCAAGCGGCACGTAAGTACGGAGTACCATCTCGAACCCTTTACGATAAAGTGAAGAAACTGGGGATCACGACATCGCGGCCTTTCAAGCGCGGCTCGAACGGCAGTGGCGCTTGTTTCCCCTACGGGATCGGCGGTAACGTCAACGGAAGCATATACGGCGGCGGTGGCGGCGGCGGCGGCGGCCTCTCCGAGAACGAGAACGAGAATAGCAACGCGGTGATCGAGAGTCCCGCGTCGATCCTAGACACGTACAAGGCCAGAGAGGCTTCCGTCGATCGTGAGATGTTGGACATCACCCGGTGCAGTTCCAGTCCTCTTCCACACTCGGCGAAACAGCAGCAGGGCAACGAGGACCAGGTGGAGGATCTCTCCGTCGGCCGGAAGTCGGATGTCCGTGTAATCGTACCACCTACATCGGTCGTCAAAGAGGAGGAGGACGTTGGCTCCGATTCCTGCAATCGTAACTGA
- Protein Sequence
- MASTSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGASVKCHKMVLAACSSYFQTLFIDLPCKHPIVVLKDVKYSEIKAILEYMYRGEVNVAQEQLAGLLKVAEVLKVKGLVEENGSGSSSQGRRAGVEEAETSMSPPPAISTSTTSSAAQSSGHASPPHSTATSYSVYGKSSDRGVNRLPLHMWQLSGLPIPHTGSNHQAAPSHHSQHSQHSQHSQHAQQTQHSQHSILSGSYDNGYETSPLKRKKLSNILMNRDTPILRTVLGQGHADSSQGIPLLHPDSHENNHFRNSSSNGSSHEHDRRNSEDISTQGEPAHSPYTDVSMMDEDDKQPSPQSYPGDAKSGIVNYVPTQKPEWKRYKQYTRNDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGSGACFPYGIGGNVNGSIYGGGGGGGGGLSENENENSNAVIESPASILDTYKAREASVDREMLDITRCSSSPLPHSAKQQQGNEDQVEDLSVGRKSDVRVIVPPTSVVKEEEDVGSDSCNRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071088;
- 90% Identity
- iTF_00183207;
- 80% Identity
- iTF_00184024;