Basic Information

Insect: Augochlorella aurata
Gene Symbol: lov
Assembly: GCA_028455555.1
Location: CM052153.1:12106173-12113012[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-18 3.1e-15 55.5 0.0 1 44 532 575 532 576 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-18	3.1e-15	55.5	0.0	1	44	532	575	532	576	0.96

Sequence Information

Coding Sequence: ATGTCGAGCGCCGCAGACAGTCCCGATGGGATGGCTTTGCAGTCGCACTACTCCCTACGATGGAACAATCATCAGACCCACATACTCCAGGCTTTCGAGGCGCTGCTGCACGCCGAGATACTCGTCGACGTGACCCTGGTATGCGCCGAGACCAGCCTCAGGGCGCACAAGGTTGTCCTTAGTGCCTGCAGTCCGTTCTTTGAGAGGATATTCGCGGAGCACCCCTGCAAGCACCCGGTGATCGTGTTGAAGGACTTCCCAGGCCACGAAGTTGCAGCGCTGATCGACTTTATGTACCGTGGCGAGGTGCGGGTCGGTCGCGAGGAGTTGCCCGGTCTGATGAGGGCTGCGGAGAGTCTGCAAGTGCGTGGATTGGCGTCGTCGGAGCCAAGACTGGCGTCCCCGCCGGAGACGCCGACCGCCGATCTTCTTCTGGGCGAGCCGTCGACGCCCGAAGGCGCCAGGCACAGCACTCCGGAGGAGGACGACAACGCGTCGGAGAGCACGGCGCCGGCATCCACGCGAGAACCAATGGCGGCCGCGACGCCCACGATCTTTCACCCGGCGAGGGATCATCGCGACAGGTTACCGCACATGAGTCACTTGAACTTTGGGGTGCGCGAGCTACGGGAGAGCTGCGGATCGCCGATACCTCGTCGGAAACAGGCACGACCGCGGAGAAGATCCGGCGATTTGGTACCGCAGGATCTCAGCCGACCGCATCCGCCGACTAGCCTGAGCCCACCGGCGAGCGGGCTGAACCTCAGCGGCAGTCAACAACAGTCACAACACCACCAACACCATCAGCAGTCATCGATCTCGCAGAACCAGCAACATCAGCAGGAGGACATAGCGGAGAACCTCTCGATGAAGAGGTCATTGTCACCCAGTGGAACCGATCAGCACCACATGAAGGCGGAGAGCAGCGAGGCGGCGAGTAGTCCGAGAGGCTCGCCATTGACCGGCACGAGTCTTCTACACCCCGACGGTTCCCTCCAAGATATTCCGTCTGCGGCAGCAGCAGCGGCGGCGGCGGCTGCGGCAGGCCTGCCGTCGATGTCGGCGTTGTCGTTGACACCGCCGCATCATCACAGCGAGTACCTGACGAGTCTGGGCCAGCTGGCGGCCCAGTGGTTGCCAAATCATCCGCAGAGCCAACTGCCACCACCGCATCAGGGTCATCATCCGCGGGAAGGTAGTCCGCACGGGCCGGGCAGAACGCACCCCTATCAACAGTCCCAGCAACAGCAGCAGCAGCAAGAATCGCCGCTGGCACCGCGGCGTAGCTCCGTTACGTCGATGTTCCCATTGGACGGTGTGGCTTCTCTCGGCGGAGGACTATTCCCTCACGCGGGTGCTCTCGACAGGGGAACCCTTTTAGCGGATCTCCACGACAGCTTTAAGCCGGAAACGCTGCACGGGCTGTTCGGCGCGGCAGGGCTCGGTGGTCATCATCCAGGAAAGAAGCCTAAGAAGCACAGGGGCGACGGCGACACGCCGCGCAGGTGGGGAGACCACGGCAGTCGGGGTTTGCCGGTGGGAAGACCGAAGGGTCAGCACAGCGCGCCCAGAGGCGGACCCCCGAGGTCGTGGACGAACGCGGAGCTGACCGAAGCGCTTCAGCACGTGTGGAATAAGAAGATGACGACGTCGCAAGCGAGTAGAATCTTCGGTATTCCGTACAACAGTCTCCTGATGTACGTGCGAGGTAAATACGGGAAGAGTCTGAAGCTCGAGCAGCTCCGAAGGGATTGCACGGGCGCGACGACGGGCGACGTCGTGATGAACTCGTTGAACAACAACGTCAAGACCGTCCAGCCGCCCACGCAAATGACCCACCCGCTCGCCGGTCTACCACCTCATCCAGGCGACGACAGCGGATTTCCTCATCATTCGTTGCTAGGAAGTAATCTGCCGCAGGGTTTCTTTCCCGACTTTGCGGCCGCGGCGTTTCCCGTGCCAGTTAGTATGGTGCATTTGCTACCGCCGAGCGAACAGAAGGCCTTCGAACCAGCCGGGAACCCGGGTGGCGGCGGTGGTGGTGGCGGCAGCGGCGACCTCTCTACTTCGCGGAGTAGTCGAACACCGTCGCCGATTGATCATCATCACCACCATCATCACGAGTCGTTGCAGCCGCAACCGCCTCAATCGGCGCCCGCGCTACTTCAACAAAACGGTTCGGATTAG
Protein Sequence: MSSAADSPDGMALQSHYSLRWNNHQTHILQAFEALLHAEILVDVTLVCAETSLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGHEVAALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASSEPRLASPPETPTADLLLGEPSTPEGARHSTPEEDDNASESTAPASTREPMAAATPTIFHPARDHRDRLPHMSHLNFGVRELRESCGSPIPRRKQARPRRRSGDLVPQDLSRPHPPTSLSPPASGLNLSGSQQQSQHHQHHQQSSISQNQQHQQEDIAENLSMKRSLSPSGTDQHHMKAESSEAASSPRGSPLTGTSLLHPDGSLQDIPSAAAAAAAAAAAGLPSMSALSLTPPHHHSEYLTSLGQLAAQWLPNHPQSQLPPPHQGHHPREGSPHGPGRTHPYQQSQQQQQQQESPLAPRRSSVTSMFPLDGVASLGGGLFPHAGALDRGTLLADLHDSFKPETLHGLFGAAGLGGHHPGKKPKKHRGDGDTPRRWGDHGSRGLPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGDVVMNSLNNNVKTVQPPTQMTHPLAGLPPHPGDDSGFPHHSLLGSNLPQGFFPDFAAAAFPVPVSMVHLLPPSEQKAFEPAGNPGGGGGGGGSGDLSTSRSSRTPSPIDHHHHHHHESLQPQPPQSAPALLQQNGSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01539520;
90% Identity: iTF_00184036; iTF_00762469; iTF_00763153; iTF_00762653; iTF_00863366; iTF_00863190; iTF_00861049; iTF_00861274; iTF_01070951; iTF_01071106; iTF_00625416; iTF_00625606; iTF_00861995; iTF_00861794; iTF_00864556; iTF_00864740; iTF_00865428; iTF_00865233; iTF_00862677; iTF_00862479; iTF_00863869; iTF_00864074; iTF_01169085; iTF_01169276; iTF_00966110; iTF_00965956; iTF_00866624; iTF_00866797;
80% Identity: iTF_00184036;