Basic Information

Insect: Augochlora pura
Gene Symbol: RREB1
Assembly: GCA_028453695.1
Location: CM052107.1:9491891-9501131[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0051 0.36 11.2 0.5 1 23 46 68 46 68 0.96

2 16 0.00084 0.06 13.7 0.3 1 23 82 104 82 104 0.97

3 16 4.8e-06 0.00034 20.8 1.1 1 23 110 133 110 133 0.98

4 16 0.34 24 5.5 0.0 1 23 333 357 333 357 0.92

5 16 0.7 49 4.5 1.6 2 23 363 385 363 385 0.92

6 16 4.7 3.3e+02 1.9 0.4 1 19 441 459 441 461 0.79

7 16 0.52 37 4.9 0.1 1 23 575 597 575 597 0.96

8 16 0.0078 0.55 10.6 0.0 1 23 606 628 606 628 0.98

9 16 0.031 2.2 8.8 4.2 1 23 634 657 634 657 0.97

10 16 0.02 1.4 9.4 1.9 3 23 1035 1056 1033 1056 0.95

11 16 0.00064 0.045 14.1 0.1 3 23 1323 1343 1321 1343 0.97

12 16 0.85 60 4.2 6.1 1 23 1349 1372 1349 1372 0.96

13 16 0.004 0.28 11.5 2.2 1 23 1410 1434 1410 1434 0.97

14 16 1.8 1.2e+02 3.2 5.7 1 23 1517 1540 1517 1540 0.95

15 16 0.011 0.77 10.2 0.4 2 23 1591 1612 1590 1612 0.94

16 16 1.3 91 3.7 8.2 1 23 1618 1640 1618 1640 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0051	0.36	11.2	0.5	1	23	46	68	46	68	0.96
2	16	0.00084	0.06	13.7	0.3	1	23	82	104	82	104	0.97
3	16	4.8e-06	0.00034	20.8	1.1	1	23	110	133	110	133	0.98
4	16	0.34	24	5.5	0.0	1	23	333	357	333	357	0.92
5	16	0.7	49	4.5	1.6	2	23	363	385	363	385	0.92
6	16	4.7	3.3e+02	1.9	0.4	1	19	441	459	441	461	0.79
7	16	0.52	37	4.9	0.1	1	23	575	597	575	597	0.96
8	16	0.0078	0.55	10.6	0.0	1	23	606	628	606	628	0.98
9	16	0.031	2.2	8.8	4.2	1	23	634	657	634	657	0.97
10	16	0.02	1.4	9.4	1.9	3	23	1035	1056	1033	1056	0.95
11	16	0.00064	0.045	14.1	0.1	3	23	1323	1343	1321	1343	0.97
12	16	0.85	60	4.2	6.1	1	23	1349	1372	1349	1372	0.96
13	16	0.004	0.28	11.5	2.2	1	23	1410	1434	1410	1434	0.97
14	16	1.8	1.2e+02	3.2	5.7	1	23	1517	1540	1517	1540	0.95
15	16	0.011	0.77	10.2	0.4	2	23	1591	1612	1590	1612	0.94
16	16	1.3	91	3.7	8.2	1	23	1618	1640	1618	1640	0.98

Sequence Information

Coding Sequence: ATGGCTGACCCAATCTACTTAACGCTAAACTTACCAAGCGTGACTGTCAATAGTGGACCCAACCAGGGAAACGATAACGAGACCCAAGCCGATGCCGCATCGCCGTTATCAAGCGTGGATCTGCCAGAGTGCGCGCACCCATGTCCCGCGTGTCCCACTGTGCTGTCTAGCACCCACGAGCTGACGAACCACCTGCGCGGCCACAACTCTCCCCGCAGCACGGATTGCAGCGGCGAGGAGGACTACTGTtgcggtgtgtgcagcaaggtgctcagctcggcgagctcgttggacaggcacgtgctggtgcactcgggcgagcgtccgttcaaatgcaagtcctgcgacatggcgttcacgacgaacggtaacatgaacaggcacctgAAAACGGCGCACGGATCGTCGCCGTCGCACAGTTGCACGGAGTCGGAGGGCAGCAGCGACTCGGACAATTCGTCGAAGCGTCGGCACATCGAGGAGTACAACAACAACGAGATCGCGAAGAAAACGGAGCCGAGTCTCAAGCGGAAGTCGCCGGACTTCGTCGAACGGAAGAAGAAGTTGGCGACCGTGAAGAGGAGTTGCACGGACTTCGACGACTGTCAGGATAACTCGCCGGAACAGAATTCGAAGTCGCCGGACTTCATCGATCGGCAGGAGGACATGCCGAATCTGAAGCGGAAGTCGCCGGACTTCCTGGAACGGCAGGATACTACGCCGAACGTGAAGCGAAAGTCGCCAAACTTCCTAGAATGGCAGGAGAATTTGTCGAGCCTGAAGCAGAAGTCGCCAGACTTTGTAGACTGGCAAGAGAACGATTCGAGCATGAAGCAAAAGTCGCCGGACCTCGTGGACCGACAGGAGACCCTGCAGGCCTTGAAGCGAAAGTGTCCGGACTATGTGAGCGACAACGAAACCCTGAAGAGGCACAAGATCATGTTGAACAATGTCCGTATGGAGATCATGGTGAGCCCGGACGACAGCCAAAAAGTTTTCATCTGCCCGATGTGCAGCAGAGAGGATTTCGCGACCAGCGCGCTGTTGGAGTCGCACCTGGAGCAAGCCCATCCCGACTTCCAAGCGAAGTGCGACCCCTGTGACCTGTCCTTCAGAAATCACCGAGTGCTGAACCTCCATCGGTTTATGGTTCACCTGTCGGAGCATGCGATATTCAACGCAAGCCGCAACTCCCGAAACTCCGTCATCGGTTTCAACGATCTGACCTTCATCGACTTCTCCGCGGACAAATTTCCGGCGATCGCCCGAGCCGTCTGCGAGCAGTCGCTTCATCGACCTGCTTCCGGCGAGGTGGCCAAGTTCCAATGCTCCAAGTGCCTCAGAGCGTTCCCGTGCCGACTGGCGTTGGAAGCGCACGAAACCGACTGCGGCACGTCGAACTCCCAAGCCAGGGTGATCGACGACAGCCAATCGAGGAGAGACTACTTCTTCGCGGGTCTCGACCTGCAGAACAAGGCGGCGATGACCGAGGCCAAAGAAGGCAAAGACTTGGCCGACATCCAGAGCATCATCTCGGTCACATCCGGCCCGATTTTGCAGAACTTTCCAAGGTCCGACGCCAGCACGCCCGAAAGCAATATCAGGTTTAATCCGAGCGTCAGCTCGTCCGGCTCCTCCGGCATGTTCTGCTCGGAGTACCACGAGGAAGAAGCACAGGACGCGTTCGCGGCCGAATATAGAAAGATGAAACTGAAAGGCGAGTTCCCGTGCCGACTATGCAAGGCGATATACCCGAATTTGAGAGCGTTGAAGGGCCACAACAGAGCTCACATGAACGTCGATCCAGAGATGCCTTACCCTTGCGTCATATGCCCCTTCAACGGCCCCGACAAGGCCACCCTGGTGAAACACTTGAGATCCCATAACGGTGACAGACCGTTCGAGTGCGCGTTGTGCCACTTCGCGTTCACGACCAAAGCGAACTGCGAGCGACACGTGAGGAACAGGCACGGTAAGGTGACCAGGGACGACATCAAGAGCGTGATAATTTACCATCCGAACGAGGATTCGACCGCGGACAAGGACGACGCGAGGAAGAGCCTGGTGTATACGAACGACGAGCTGCAGCATCAGACGCAGATGCATTACCCGTCGGCGCCGGTGGAGGGCCGCGGCGAGATCAGGATAATCGAGGAGGCGAAGTTGCACAACTCGTTGTCCCTGCACGCCGGCTACGAGAAAGCCGGGAGCTACCCGAGGCTGGGTCAGCAGGCGATCCCGTTGACGCGGAACGCGGACGAGAGGAAGTCGGGGCACAGCAAGCAACAGTACTACACGAAGCTCGAGGAGGACCTGGAGTCGAGGTTGTCGGAGAGCAGCGTGTCTCTAGTCAGTGATACCAAATCCGATTCGCACCAAAGAATACAAGCTAGTCGGATGAACCGAAAGAGGCGTCCTTCGGTGTCGGAGATGACCGGGGACGACGGTCCCCTGGATCTGTCGATGGACGTTCTGGATCTCAGCAAGAAGCCGAAGCGCAACGAGGACGGGGACTGTTCGGCCGCGCAAGAACAATATGGGAAGAAACAGGAGGAGCTGTACAACACTGCGAAACAATTGTTGCTCGCCGAGGCTCTGCTACAGGCGAGCCAGGCTAGCCAGGCGAACGCGCACAACGTGTCGGTGAACGGAGTCAACCCGGACAGTCATTTATATTACCGCGCGTACCCCGACGATCAAGGGCCAAGGATACTGCCGCCGTACTTCTTCGGACCGCACGTGTTCTGCCCGGACTTGGCGTTGAAGGAGAGACTGCAAAAGGAATTGGTCAGAGGCCTGCAACTGACCAGCGGCGGGACTTTGGTAGAGCCATCGGTTGGAACGTCGGTGGAGCCATCGATCGGTACCACCGGATACGGCGCGTATCCTCAAAACAGAGACATGATCTCGCAATCGGCGAACGATCAGAACGATTACGCGAAGTTAATGAACCCGAAGATGTCGAACAAGGCGTTGTCCGGCAAGGACAAGCCCGACAATAAGCAAATACCGTCATCGAACTCGGTGAAGATGGTGATCAAGAACGGCGTGCTGATGCCGAAGCAGAAGCAGAGGCGGTACAGAACCGAGAGACCGTTCGGTTGCGGACACTGCTCGGCGAGATTCACCTTGAGAAGCAACATGGAGAGACACGTCAAGCAACAGCATCCGCAGCATTGGAGACTGAAGACCAGAGGGGGACACTCGACCAGAGGCAGACCGCCTTCCAATCATCCCACCTTGCTGCAGAATCTGAGACAACCCGCGTCTCAAGTATCGCCGTCTTACCTTAATATCCTGCCTAAATCGTTGCCGAGCGCGGACTGCTCCGCGAAACACCCTATCTCGGACCAGGTGAAGTACGCCATCCTGGCGCAGCAGTTGAAGGCCAACAAGGTTGAGGAGAACGACACCGAAGAGGAATTGGTGATCGACGAAGAACCTCAAGAGAAGGAGCAGGAATCTCAGAAGGAGAAGTGCACTAGCTTGTTGAGAGGTCAATTGGAGGGCTCGGATGTAGCAAAAGAGATAAAAGAAGAGCACGAAGAGTGTGTGAAAGGAGAGTCGACCAACACGGAGTCGGCGAACAGCGACAACGCGAACGACGAGTCGAAGATGTCGGACTTGGAACAATCGATGGAAACTAGCGAGCACGACGACGTCAAGATCAAAACCGAGTCGGTGGGTGAGAAGACGGAGAAGATTGACGACGTGGCGACAGACTTGGCCAGCGTATCGGAGCTATTGGACAATGCCTCGCAGCAGTTCCAGCAGTTTCAGCCGCAGTATCTGAGCGACGAAGAGGGCTTGGTCGCGTCGAACAGCGACTGCAACAATTCCGGCAGCGACGAGAAGTCCGACTCTGTGAACTCGTTGAACTCCGTCAGCACATCGTCGAAGAAAAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGTCCGCGTACTCGATGGCGCCGAACCGAGTGATCTGCCCGTATTGCGAGCGACCGTTCCCGTGGACATCGTCTTTGAGACGGCACATCCTGACACACACGGGCCAGAAACCCTTCCAATGCGTGCACTGCTCCCTGCTCTTCACTACCAAGTCAAACTGCGACCGTCATCTGTTGAGGAAGCATAAAACGAGCCCTAGCAAGATCCGCAGGAGTAGGAACTCCTCTTCGCCGGACAGTCAAGCGGTTATCAGCAACAACAACTCGTTCTCCATGAGGAACGTACCTGAGCGACCGTACAAGTGCAATCAGTGTCCAAGCTCGACCTTCTCCACTCTAGGCAATTTGAAGAAGCACCGCTCGACGAAGCACGCTCGCAAAATGAAGTCCAGATCAGACACTCCGTCCAGCGAAGCTCAGAACAGTCCTCAAGAATGCTCGAAGCAGAACGAGCAGACGGATTACGACAGCCAATCGTCGAGCGTCTCCGAGGGAATGGAAACCACATCCGTGTCCGGAGTGCCGAAGTCGAGTCCGACCACCTTGCAGTCCATAAACGACACGCCCAGATCTAGGAGACCCTCACCGAGATCGTCGCCCGGTCCCAGCGACGTACCCTTCAAGTGCCACCTGTGCGACTGCGGCTTCTCCGAGCGGCAAGATTGCTTGGAACACATCAAGGTGAACCATGACAGAGAATACGAGATGCTGGTGGCGAAGGGGGCATTGGACATGGACATTGATACTGTCGAAGATCAGCAACAGCCACCACAGCAAAACCACCCCAGCGATGGCGAGGAGAAGAGAGGTCGCTTCCCGGATTACAGCAATAGAAAGGTGGTATGCGCTTTCTGCATGAGACGGTTTTGGTCAGCGGAGGACCTGCGCCGGCACATGAGGACCCACACAGGCGAGAGGCCGTTCTCCTGCGACATCTGCTGCCGGAGGTTCACGCTGAAGCACAGCATGCTACGACACCGGAAGAAGCACGAATCGGTGGACTCTACTATGTACGTGGGGACCAGCGGCGACGAGGAGAACTCGCCCACGCAGCCGCCCACTATTACACCTAGGAGTCAACAGCAACAACCCCCGGTCCTGGTAGGGAATCCTACAATACAGGACCGAATCTCGTTGCCGTCGGTGGCCCCCGTTGCCACGGGCGACGCGGCGCCCAGTGGGCTGGTGCGGTTCAACCCTTACGGGAACTTGCCATCCTTGACAGGGAAACTGAACGCCACCCCGCAAAACGCGAACCTGGATACCAGCGAGAGCACGGACAACGACCTGATCTCCAATCTCCTAGGCATCCGGGATAAAAATTTCATTGACCGAGTGCTTCAAGCGTCCGCCGATGACGCCGCCAAACTTCTCGGTGTAAAGCATAGCCATGAGTGA
Protein Sequence: MADPIYLTLNLPSVTVNSGPNQGNDNETQADAASPLSSVDLPECAHPCPACPTVLSSTHELTNHLRGHNSPRSTDCSGEEDYCCGVCSKVLSSASSLDRHVLVHSGERPFKCKSCDMAFTTNGNMNRHLKTAHGSSPSHSCTESEGSSDSDNSSKRRHIEEYNNNEIAKKTEPSLKRKSPDFVERKKKLATVKRSCTDFDDCQDNSPEQNSKSPDFIDRQEDMPNLKRKSPDFLERQDTTPNVKRKSPNFLEWQENLSSLKQKSPDFVDWQENDSSMKQKSPDLVDRQETLQALKRKCPDYVSDNETLKRHKIMLNNVRMEIMVSPDDSQKVFICPMCSREDFATSALLESHLEQAHPDFQAKCDPCDLSFRNHRVLNLHRFMVHLSEHAIFNASRNSRNSVIGFNDLTFIDFSADKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRLALEAHETDCGTSNSQARVIDDSQSRRDYFFAGLDLQNKAAMTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPESNIRFNPSVSSSGSSGMFCSEYHEEEAQDAFAAEYRKMKLKGEFPCRLCKAIYPNLRALKGHNRAHMNVDPEMPYPCVICPFNGPDKATLVKHLRSHNGDRPFECALCHFAFTTKANCERHVRNRHGKVTRDDIKSVIIYHPNEDSTADKDDARKSLVYTNDELQHQTQMHYPSAPVEGRGEIRIIEEAKLHNSLSLHAGYEKAGSYPRLGQQAIPLTRNADERKSGHSKQQYYTKLEEDLESRLSESSVSLVSDTKSDSHQRIQASRMNRKRRPSVSEMTGDDGPLDLSMDVLDLSKKPKRNEDGDCSAAQEQYGKKQEELYNTAKQLLLAEALLQASQASQANAHNVSVNGVNPDSHLYYRAYPDDQGPRILPPYFFGPHVFCPDLALKERLQKELVRGLQLTSGGTLVEPSVGTSVEPSIGTTGYGAYPQNRDMISQSANDQNDYAKLMNPKMSNKALSGKDKPDNKQIPSSNSVKMVIKNGVLMPKQKQRRYRTERPFGCGHCSARFTLRSNMERHVKQQHPQHWRLKTRGGHSTRGRPPSNHPTLLQNLRQPASQVSPSYLNILPKSLPSADCSAKHPISDQVKYAILAQQLKANKVEENDTEEELVIDEEPQEKEQESQKEKCTSLLRGQLEGSDVAKEIKEEHEECVKGESTNTESANSDNANDESKMSDLEQSMETSEHDDVKIKTESVGEKTEKIDDVATDLASVSELLDNASQQFQQFQPQYLSDEEGLVASNSDCNNSGSDEKSDSVNSLNSVSTSSKKKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPFQCVHCSLLFTTKSNCDRHLLRKHKTSPSKIRRSRNSSSPDSQAVISNNNSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKMKSRSDTPSSEAQNSPQECSKQNEQTDYDSQSSSVSEGMETTSVSGVPKSSPTTLQSINDTPRSRRPSPRSSPGPSDVPFKCHLCDCGFSERQDCLEHIKVNHDREYEMLVAKGALDMDIDTVEDQQQPPQQNHPSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEENSPTQPPTITPRSQQQQPPVLVGNPTIQDRISLPSVAPVATGDAAPSGLVRFNPYGNLPSLTGKLNATPQNANLDTSESTDNDLISNLLGIRDKNFIDRVLQASADDAAKLLGVKHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00184150;
90% Identity: iTF_00184150;
80% Identity: -