Basic Information

Insect: Augochlora pura
Gene Symbol: salm
Assembly: GCA_028453695.1
Location: CM052105.1:1572240-1583310[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.6e-06 0.00033 20.8 0.9 1 23 381 403 381 403 0.98

2 9 9.2e-06 0.00065 19.8 2.1 1 23 409 431 409 431 0.98

3 9 0.058 4.1 7.9 3.8 2 23 793 814 792 814 0.98

4 9 4e-08 2.8e-06 27.3 0.6 1 23 820 842 820 842 0.97

5 9 5.6e-05 0.0039 17.4 2.6 1 23 852 874 852 874 0.98

6 9 0.0019 0.14 12.5 1.9 2 23 1176 1197 1175 1197 0.97

7 9 0.029 2 8.9 1.0 1 14 1203 1216 1203 1217 0.92

8 9 5.4e-07 3.8e-05 23.7 2.1 3 23 1409 1429 1407 1429 0.96

9 9 1.8e-07 1.3e-05 25.2 0.9 1 23 1435 1457 1435 1457 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.6e-06	0.00033	20.8	0.9	1	23	381	403	381	403	0.98
2	9	9.2e-06	0.00065	19.8	2.1	1	23	409	431	409	431	0.98
3	9	0.058	4.1	7.9	3.8	2	23	793	814	792	814	0.98
4	9	4e-08	2.8e-06	27.3	0.6	1	23	820	842	820	842	0.97
5	9	5.6e-05	0.0039	17.4	2.6	1	23	852	874	852	874	0.98
6	9	0.0019	0.14	12.5	1.9	2	23	1176	1197	1175	1197	0.97
7	9	0.029	2	8.9	1.0	1	14	1203	1216	1203	1217	0.92
8	9	5.4e-07	3.8e-05	23.7	2.1	3	23	1409	1429	1407	1429	0.96
9	9	1.8e-07	1.3e-05	25.2	0.9	1	23	1435	1457	1435	1457	0.98

Sequence Information

Coding Sequence: ATGCAGCTCATGAGATGGAGCATTACGCGTCGTCTCGAATCCCGCGGCATCAAGCAAAGCACCTGCAGACAGTCGAGGCTCTCGTGTCCCCGATCTTCCGGAGAAGAAAATGACTTTACATCGGACGGTGAAGAGAGCGGTGGTCCGGGAGGCGGAGGAGACGAAGCTGTGGATCTCACTGCAGCCCGATCTCATCAGGGCGATGAGGACGATAAGGACCAGGATGACGCTCTGGAGGAGGACGAAGAGGAAGGCGTGGACGAGCAGGACGAGCAGGACGACGACGAAGAGGGTTCGCGCAAACAGATGCACCATCGTCAAGACGCGGAGAACAACAACAATTTCGTGGAGAGCGGCGCGGCCGCCGGCCTGTTTCCACCAGCTGGAACTAGTCATGTCACCTTGGAAGCCCTGCAGAACACAAAAGTGGCGGTCGCGCAGTTCGCGGCGACAGCCCTGGCCGGTGGCGCCGACAGCGAGGCGGCCCTGCAAGATCTGGCGTTGCTGCAGAGCACCTTGTACACTCTGCAGCATCAGCAGGTGTTCCAGTTGCAGTTGATCAGCCAACTACAGCAACAACTGTCCATCACGCACAGCCAGTCGGCGCAACAGCAGACCGTGGGTGAGCCGTCGGATAACAAAGAAGTATCTCCGTCTCCCATAATCCAACCGAAACCCATCTCGAGTTTAACGTCGCCTCCGTCGTCGCGTCCGCCGAGCCACCAGCAAACGTCGCCGGCCCCCATGACGCCGAATCTGTCCCAAGAACGACCGACTCCGACGAGCAGCGCTTCCCCTTTGAATCTTCCGTTACCTTCGTCGAACGCCACCGGCACCACGGCTACTACGAGCAGCAGCAGCAGCAGCCAGGTGCCGATGTCTCATCAGATGCCACCCCTCTGTTCCATCAGCTCCTCCCTCGCCTCGTCGATAATAACGAACACCGATCCGCCGCCGTTGCACGAGCCGAACACGCTGGAGATGCTGCAGAAGAGAGCTCAGGAAGTGCTCGACAACGCCAGCCAGGGTCTGCTGGCCAACAACTTGGCTGACGAGCTCGCGTTCAGGGGTGGGAAGGGCTCCCGTCCCTCTCCGTACGACTCAAAGTCTGGTAgcggtcgcggggagccgttcttcaagcatcggtgccgctactgcggcaaggtgttcggcagcgattcagcgcttcagatccacatacgatcgcacacaggtgagcgaccctttaaatgcaacgtctgcggcagccgcttcaccacgaaagggaacttgaaggtccacttccaaaggcatacggccaagTTTCCACATGTTAAGATGAACCCGAATCCCGTTCCGGAACACCTGGACAAGTACCATCCACCCCTGCTACAGCAGATCGCCTCCGGTCAGAGACCAATGCCGTCCCCGCCGCCGCCGCCACCTTCTCATCATCCCTCTTTTCACCCGGCGGCGGCGCATGGTTTTTTACCTCCTCAGCCGCCCCTGCCACTCAGTTTAGCCCTGCCCGGTATGCCGCCCTTGTACAGATCACCGGTCGTCGCCCATCGAGACGATCAGGACGTACCGGAGAACCTGAGCAAACCCGTAACCACTGCCCCCACCACGTCTCCACATTCCCCCGCGATTGTGTCGAACTCTCGTCATTCCTTTCACGACAATCACCAACAACAAAAGCAGCAGCTCGAACAGAGGGACGAGATCAAGCTCGAGCAGCGGTCGCCCATGCAAGAGCAGTACCAACAGCGGCCCACGAGTCGAGAGGCGTCCGAGAGGATAACGCCGAAGAAGGAGCCGGAGGAGACCGAGGAGCCGACGGAAGAGGAGAGCGAGGACTTCGAAGAGGCGTCCAGACGGTACTTGAACTCTCCCCAGTCGTCCGTGAATCCGCTCTCGCATCCGCAAGCGTACGAGGACTGCAGCCTGGACAGCAAGATCAGCGGACGACTGGAAGCGGACGGTGACATGGAGGTCGACGAAGAGATCGAGGAACAGCCCGAGAATTTGTCCGGTCGGGGAGCCATGAACCGTTTGCCGCAACAGATCGTCGCTTATCCGGGAGCATCGCCTGCCAGCAGTAGCGCGAGCAGCGGGAGTCTCCAGACCTCGTTCGCGGGGATTCTTTTCCCCGGGCCGCCGGCGCACCATCAAATACCCCATCACGCCGCGACGGCGGTCGCGAACACGCCGCTTCCCGTTTCCACCAACGAGATGATCGACCCGGCCAAGGACCCGGCCATCTACTCGAGCCTCCTGCCACGACCGGGCAGCAACGACAACTCCTGGGAAAGTCTGATCGAGATCACGAAAACTTCGGAGACGTCCAAGTTGCAACAGTTAGTCGACAACATCGAGCACAAGCTGACCGATCCGAaccagtgcgtgatctgccacagagtgttgtcctgcaagagcgcgctgcagatgcactacaggacccacaccggtgaacgtccgttcaaatgtaaaatctgcggtcgcgcgttcactaccaagggcaacctgaagacgcacatgggcgtgcacagagcgaAACCGCCACTCAGAGTGCTGCACCAGTGTCCCGTCTGTCACAAGAAATTCACGAACGCGCTGGTCCTGCAGCAGCACATACGTCTGCATACCGGCGAGCCGACAGAGCTCAGCCCGGAGCAGATCCAGGCCGGTGAGGTGAACGAGTTCCCACCGGGTTATCCTCACCATCCGTTGGCGTCGTTTCTCCCGCAGGGCTTCCCGCCGATTCACCCTGCTGGGCCGGGCTTTCCTCTAGGTTTCCCACCGAAATTGGaactgaaggacgaagtccagcatcagcagcaacaccaacaccaacaccagcaccagcaccacctccagcaacaacagcaacagcagcagcagaggtatacggaagatcaTAGCGAGGAGGCCGACGATCAAGAGGACGAGGAGGAAGACCGTAGAGAGGACGACGAACGGTGCGACGTGAATCGCGACGGCCGATGCGAACCGGAGGACGAGCAGGATCGCGAGAGCGAGGAGAACGAGCACAAGGAGCTCTCTTTGCCGAGTTTCTCGACGTCTCTCGCGGCTCTCGAGAACCAGGTGCGGACCATCACCACGATAGCGACCTCGACGACGGGGAACGCGGCCAGGTCGTCGCCGTTTCACCGATACAACGGCAGCGAGAAGAGCAGCAGCCCTCCGAACTCGGGCGCGCCCCTCGACCTGACGCCGCGTGCATCCTCGACGCCAGCCACCGTGGCCTCGATACCAACGCCGCCGCCGCCTCCGCCGCCTCAGACGCACCATCCACACCCATTCGGCATGTTCGCAGGCCTCCTGCAGGCGGTCTCCTCGTCGCCGTCCACCAGCAGCATAGGATCCTCGAGCATAAATAGTGTCAGTTCGATGAACGCCGTCACTCCGGGATCCGGCGCTGCTGGACCTCTGGCCTCGCTCACCACGTCGGCCGTTCTCGCTGCCACATCCACCTACAACCCGCTCGGCCTAGCTGTCGGAGGGCCAGCAGtgcgtggaaacaccacatgtaatatctgctacaagacatttgcgtgcaactccgcgctggagattcattaccggagccacacgaaggagcgacctttcaaatgcaccatatgcgaccgaggcttttccacgaagAACGACGGTTCCGGTCAGCAAACGTGCAACTGTACACCTCAACCGTTGCCCGATAGTAGTTCGATCACTTCACCCGATTCCCAATATCAAACATCGTGCGCCAGTAATCGAGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAACGGAAGAACCGGGGGCGGAGAGGAGCCGGAGGGGGGCGGGGGCTGACACCTGTCTTTCCTGCCGTCCGCCTACCCTCGCTGATGACACCCGCCGCCCTCGGACTTCTACCCTCGGCCCACAGCCTCCTGGGGAACATGAAGCAACACATGCTAACACACAAAATACGCGACATGCCGCCTCATCTGTTCAGCGACTCGAagcaacagctgcagcagcagcagcagcagcagtctcaggagcacgagacctcgaGGAGTCCGATGTGCGCCGACGACACGAGCCTGCCGCCGCCTCCGCCGCCACCGCCGCCGCCGCCTCCTCCGCCGATGCCGACGACGTCGATAGAGCAAGCGATCTCGGTGAAGAGATCGCCGTCCGAGGGGGACCTGCCAGCACCGAAGAGACCAGCCAgcgtgccgagcaaacacttgtgccagatttgcaataagaatttctcctcatcttcggcgctccagatccatatgagaacccacactggcgacaaaccgttccgatgtaccgtctgccagaaggccttcaccaccaagggcaatctcaagGTGCACATGGGCACGCATATGTGGACCAACGGGGCCTCGCGGCGAGGCCGTCGAATGTCGCTGGATCTGCCTCCCCTACCCATCACGCCCAAGGACTCGGAGTTTCTTCAGCGACGGCCGGATCTCTTCTATCCGTATTTACCCGCGCCGTTCCTTAACGGTGTGCAACAGAAATTGAACGAGATCTCGGTGATCCAAAGTAACAACGGGTTACCGGGTCATTCGGTGGCCACCGGCAAGTACGCGGGCCTGTTCGGCTCGGTATACGCGGCCGGTGCTGGATTTCCATTGGACAAGCAGTCGATGGCCCCGACGAGTAACGGGCCCCTGATCGATGGTAAATCCTCGATCCCGCCCGGCTCCATGCTCTTCCAGACGTCGTCGCCATCGCACTCGCCTGGCACGCCGTCGTCGAACGGCAGCAACCAGAACTCGACGGGGGTGTCCGCGTGGACGGGCGACGGTCTCCAGCACCACTTCGACAGAGAGCCTTCGAACCGGTCCGAGAGCAACTCGACGCCGCCGTCAGCTCGACTGCCGCCACCTCCGGCCGCCAGGGGCGAGGGCTTGGCCACGTGA
Protein Sequence: MQLMRWSITRRLESRGIKQSTCRQSRLSCPRSSGEENDFTSDGEESGGPGGGGDEAVDLTAARSHQGDEDDKDQDDALEEDEEEGVDEQDEQDDDEEGSRKQMHHRQDAENNNNFVESGAAAGLFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHSQSAQQQTVGEPSDNKEVSPSPIIQPKPISSLTSPPSSRPPSHQQTSPAPMTPNLSQERPTPTSSASPLNLPLPSSNATGTTATTSSSSSSQVPMSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRPSPYDSKSGSGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPSHHPSFHPAAAHGFLPPQPPLPLSLALPGMPPLYRSPVVAHRDDQDVPENLSKPVTTAPTTSPHSPAIVSNSRHSFHDNHQQQKQQLEQRDEIKLEQRSPMQEQYQQRPTSREASERITPKKEPEETEEPTEEESEDFEEASRRYLNSPQSSVNPLSHPQAYEDCSLDSKISGRLEADGDMEVDEEIEEQPENLSGRGAMNRLPQQIVAYPGASPASSSASSGSLQTSFAGILFPGPPAHHQIPHHAATAVANTPLPVSTNEMIDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTELSPEQIQAGEVNEFPPGYPHHPLASFLPQGFPPIHPAGPGFPLGFPPKLELKDEVQHQQQHQHQHQHQHHLQQQQQQQQQRYTEDHSEEADDQEDEEEDRREDDERCDVNRDGRCEPEDEQDRESEENEHKELSLPSFSTSLAALENQVRTITTIATSTTGNAARSSPFHRYNGSEKSSSPPNSGAPLDLTPRASSTPATVASIPTPPPPPPPQTHHPHPFGMFAGLLQAVSSSPSTSSIGSSSINSVSSMNAVTPGSGAAGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNDGSGQQTCNCTPQPLPDSSSITSPDSQYQTSCASNREKPKRRRRRPEERKNRGRRGAGGGRGLTPVFPAVRLPSLMTPAALGLLPSAHSLLGNMKQHMLTHKIRDMPPHLFSDSKQQLQQQQQQQSQEHETSRSPMCADDTSLPPPPPPPPPPPPPPMPTTSIEQAISVKRSPSEGDLPAPKRPASVPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPGHSVATGKYAGLFGSVYAAGAGFPLDKQSMAPTSNGPLIDGKSSIPPGSMLFQTSSPSHSPGTPSSNGSNQNSTGVSAWTGDGLQHHFDREPSNRSESNSTPPSARLPPPPAARGEGLAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00118182;
90% Identity: iTF_00676196;
80% Identity: -