Basic Information

Insect: Atta texana
Gene Symbol: -
Assembly: GCA_004480015.1
Location: QEPB01027548.1:1033-4503[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0035 0.43 11.6 0.4 1 23 119 142 119 142 0.90

2 13 0.0064 0.8 10.8 4.7 2 23 264 286 264 286 0.91

3 13 1.1 1.4e+02 3.7 1.5 8 23 332 348 331 348 0.94

4 13 5.1 6.4e+02 1.7 7.6 3 23 437 458 436 458 0.95

5 13 5 6.2e+02 1.7 2.1 1 23 508 531 508 531 0.93

6 13 0.0017 0.21 12.6 0.2 2 23 579 601 578 601 0.94

7 13 0.00045 0.056 14.4 0.1 3 23 624 645 623 645 0.96

8 13 0.0067 0.83 10.7 3.6 2 23 697 719 696 719 0.96

9 13 0.09 11 7.2 4.2 3 23 734 755 732 755 0.92

10 13 0.00023 0.028 15.3 0.1 2 23 803 825 803 825 0.94

11 13 0.11 14 6.9 0.5 1 23 904 926 904 926 0.98

12 13 0.015 1.8 9.7 2.4 2 23 943 965 942 965 0.93

13 13 0.0059 0.74 10.9 0.8 1 23 1038 1061 1038 1061 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0035	0.43	11.6	0.4	1	23	119	142	119	142	0.90
2	13	0.0064	0.8	10.8	4.7	2	23	264	286	264	286	0.91
3	13	1.1	1.4e+02	3.7	1.5	8	23	332	348	331	348	0.94
4	13	5.1	6.4e+02	1.7	7.6	3	23	437	458	436	458	0.95
5	13	5	6.2e+02	1.7	2.1	1	23	508	531	508	531	0.93
6	13	0.0017	0.21	12.6	0.2	2	23	579	601	578	601	0.94
7	13	0.00045	0.056	14.4	0.1	3	23	624	645	623	645	0.96
8	13	0.0067	0.83	10.7	3.6	2	23	697	719	696	719	0.96
9	13	0.09	11	7.2	4.2	3	23	734	755	732	755	0.92
10	13	0.00023	0.028	15.3	0.1	2	23	803	825	803	825	0.94
11	13	0.11	14	6.9	0.5	1	23	904	926	904	926	0.98
12	13	0.015	1.8	9.7	2.4	2	23	943	965	942	965	0.93
13	13	0.0059	0.74	10.9	0.8	1	23	1038	1061	1038	1061	0.98

Sequence Information

Coding Sequence: ATGTCGAATATGACATCGTCGCAAGACCCCACGACGACGGCGGCGGTGGAGACGGAACTGGACAGCGACGGTTCGAGCTGCGGCGAGCGCGACATTTGGAAGCGCGTTCGCGGCGATTCCGCCGACACCGGACCCAAGAAGCGTCGAAAGCAGACCACGCCAGTAAGAGTCTCGTCTGGTCTTGCGGGCGTGCACGAGGATACGCGCGAGGACGAGCGCGAAAACGAAGACGTCAAAGGTAAGCCGTCGTCGCGATCGCCGTTGCTGAGCAACGACCATCACCACCACCaacaccaccaccaccaccatcaCCATCACTCGCCATCGTCGAAAGACGAGAATCTAAACAACGAGTTCCGCTGTCAGCACTGCGGTCGGCTCTTCGACAGCGACGAGACGCTCAATGTCCACGTGGACGGCGAGCACGGTGACGCAAATCAGACGACGTCAGCTGTCACTATCAAGGTAGAGCCGGCGCAGCAGCTGGATCCAACTAATGAGAGTCCCGTTAGTCTCTTAAGCGTTAAGAACTTCGCGACCACGTGGTTGGCGTCCGGCAGCCAGCAGCACGTGCAATCGCAGACACAGATGCAGTCACAGAGCGATGAATCGTGGTCGAGCGGCCCGGTCAATCAAATCGTCACGATGACGAATCATTTACAGGCTCTCTCGAGTTTTCCGGGCACCCTCGCGCAGTATCTACCTCTGCCAAATTTTCCTCTGACCGATTCTCAACTCCCTAGATCCTCCCTCGGTCCTGTACCGGTCAAGATCTTTAATCCGGACGCGTATTGCGATATGTGCAACAAGGAGTTTTGCAACAAGTATTTTTTGAAGACACACAAAGCCAACAAGCATGGAATCTACGTTGATTCGCCAGTGCCAACGGCTATAGACTCCATCAATGTCGCTGGCGGCAGCGTATTCAGTGCCGTGAACTTCCATGCGAGTAACGCGAGCGTGAAATTGGAGCCGCCGGCGACTCCGCCACAGAAACGTTTCCGCAACGAGGATTCTATGAAGAAGCACAAGCAAAAAACGCACAACGAATCACCTGTGGATCAGCAGTCAGATGGCCAACAGATCTCTATGCAGTCGCAGAGCGAGGAGGATCGAATGACGTCGCGTGACAGTCCCAGCGGTATAGAAGCGCTCTTGAAGCAGGAATCGTACGGCATCGAGCAAGAAGATGCAACCTTTATGCCGGCCCCCAGACATCTCTCGCCCCAGTCCATCCAACAAGCACGTGATTCTGGTTTCAGCGCTGATCTTCTGCGCCGACTTGGCGTCATAAATCCCGAGGCATTTTGCGAAATCTGCTGCAAGGAGTATTGCAATAAGTATTTCCTACGCACGCACAAGATGAAACGGCACGGTGTTGTCGTGCAGGACAGCGAGCGATCGCCCGGTAGTTCCGGCACTACTGTCAACACCTGGCACCAGGTGCAAACCAGTCCACTGAACTTGATCGTGTCTGAAGCTGCTACGAATGCGGAGTCTAATGACCGCGGCAGCGAGGAATACGAGTGTAAACCCTGCACTATTCGTTTTCAGACGATCGATCTGTATCAGGCGCATTGCAGGAAGATGCACGAGGGCGAGGAAAGCGGCTCACCGAAACAAGAATACGACTTAGATGGCTCTGATCAGCGTAACGATTCGATCTCAGAAGATCTTCAGAAGCTGCAGACGATGATCATGCAGCTGAATGGTCTAGATTCTGGTAAGGGATTATCCTGCGCTGCCTGCGGCAGAGAATGTGATTCGAGGTCAGCCTTACGCGTTCACATGGCGACCGAACACGGTATCACCGGTGATGAACCCTCATTGTCGCCGCAAAAGTCACCAATAATCATTTCGACTATTCTCTGTACTCTCTGCGAGAAGGATTATCCTAGTCAAGATGCATTAAGGAGACACATTAACGAGGAACATCAGCCCATCGTATCCAGTGCTATTTCTCTGCCAGCACTGCCGCCAACAGTAATTGCCTCTTCCGCTAGTTCGACACCGACTAGTCAGACTCCAAGCGGCCAAGCAACAACGATGACAGAAAAGAAGGTAACGTCACTAACTCCTACATCGAGCTATTGCGAGATATGCAACAAGGAGCTGTGCAATAAGTATTTCATGAAGACGCATATGCAGCGGATGCACGGCATCGAGATCGAAAACGGCGCACAGATCGGCGGCGTCATCTGCAACATTTGCAACAAAGAGCTTTGCAGCAAATACTTTCTGCGAGTTCACAAGCATAATACTCATGGAATCATCGACGATAACACGTCGTCATCAGCGTCGAACAACAAACAGGAATCTTATGATGTTCCTAGTGCCGAGGACTCGGCACTGAAACCGGAACAATTGGGCGATCTTAGTCATagatatttcattcatttcacCGAGGTATGTCCAATTTGCAGTCGGAGGTTCCGCAGCATCAAGTGGCTGAAGGCGCACTTAATGGGCGATCACGGCAAAGCGGGGATCGACAAATGGCGCGAATTGGAACAACAGTATCAAATGACGTCCAGAACCTGTGGTAGAAGTGTTGTTTCGACGAAGAACACGCAACAAACATCAAACCTGAAAATTCCCAATGGTTTCGAGGTTACCCAACAAATCAAACCTGTCGATTACACAAGTCTGGGAAATCAAATGCTATCAAATCTTTTCGGTTCCTCATCTGAGGAGTctcaattaaagaattatcgCTGCGGTTACTGCAACTTTTCGACCCCTGTATTACCCTTTCTGTTTCTTCACGAGCGATCCCACGTGAATCCACAGGAAAATCTCGAAGGAGATCGAGCGATCTCCTCATTACAATGTCCGATCTGCTCGCACGATTTTCATCAACCGGAGCTGCTTCATCAGCATCTGCTTGCCAAGCATCAATTCCCTTCTCTGTTATCGCAATTTCCACATCCTCTCATGAATAATCTTAGATCAGATATTGATATCAAGACGAGCGATACCAAAAATAGAACTGATCAGGATACAAAAGACGATCGTGTGGGATGCAATCCACACACCGATCGGAATATCCCCGAGCCCACCAAAAACCAGCGGCAGGACGAAACTACAGTAAAAGTGACTCCTCAGGGTGTGTATAAATGCGCCCAATGCGGTTATGCGACGACAAATCTGAATCGCATCAAGAAGCACGTGCGGAAAGATCACAAGGCGATAGGCGATCCGACGGAAAGCGTGATTGCCGAGCTCAGCAAGACCCTGAAAGACGTAGCGAACAAGCAGAAGATGCCAGCCTGTTACGCGATGCCGCAGGATATGAACTCAAACCCCGACAAGACCATTATGCAACCGTTCCTGATCGAGGAGCAGGATCTGATGCAGGTGGGCGCCGAGTCTAGCTCGGCGAAGAAATTCGCGCCGGCTCTGGTCTACTTGCCGGTCAAGTCCAGAATCAGCAACTCCCTAACCGCCTCCTTCACTCTCACCCCCGCCTGA
Protein Sequence: MSNMTSSQDPTTTAAVETELDSDGSSCGERDIWKRVRGDSADTGPKKRRKQTTPVRVSSGLAGVHEDTREDERENEDVKGKPSSRSPLLSNDHHHHQHHHHHHHHHSPSSKDENLNNEFRCQHCGRLFDSDETLNVHVDGEHGDANQTTSAVTIKVEPAQQLDPTNESPVSLLSVKNFATTWLASGSQQHVQSQTQMQSQSDESWSSGPVNQIVTMTNHLQALSSFPGTLAQYLPLPNFPLTDSQLPRSSLGPVPVKIFNPDAYCDMCNKEFCNKYFLKTHKANKHGIYVDSPVPTAIDSINVAGGSVFSAVNFHASNASVKLEPPATPPQKRFRNEDSMKKHKQKTHNESPVDQQSDGQQISMQSQSEEDRMTSRDSPSGIEALLKQESYGIEQEDATFMPAPRHLSPQSIQQARDSGFSADLLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGVVVQDSERSPGSSGTTVNTWHQVQTSPLNLIVSEAATNAESNDRGSEEYECKPCTIRFQTIDLYQAHCRKMHEGEESGSPKQEYDLDGSDQRNDSISEDLQKLQTMIMQLNGLDSGKGLSCAACGRECDSRSALRVHMATEHGITGDEPSLSPQKSPIIISTILCTLCEKDYPSQDALRRHINEEHQPIVSSAISLPALPPTVIASSASSTPTSQTPSGQATTMTEKKVTSLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIIDDNTSSSASNNKQESYDVPSAEDSALKPEQLGDLSHRYFIHFTEVCPICSRRFRSIKWLKAHLMGDHGKAGIDKWRELEQQYQMTSRTCGRSVVSTKNTQQTSNLKIPNGFEVTQQIKPVDYTSLGNQMLSNLFGSSSEESQLKNYRCGYCNFSTPVLPFLFLHERSHVNPQENLEGDRAISSLQCPICSHDFHQPELLHQHLLAKHQFPSLLSQFPHPLMNNLRSDIDIKTSDTKNRTDQDTKDDRVGCNPHTDRNIPEPTKNQRQDETTVKVTPQGVYKCAQCGYATTNLNRIKKHVRKDHKAIGDPTESVIAELSKTLKDVANKQKMPACYAMPQDMNSNPDKTIMQPFLIEEQDLMQVGAESSSAKKFAPALVYLPVKSRISNSLTASFTLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423182;
90% Identity: iTF_00182238; iTF_01477233; iTF_00417880;
80% Identity: -