Basic Information

Insect: Atta texana
Gene Symbol: ZFX
Assembly: GCA_004480015.1
Location: QEPB01014970.1:1-1786[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1 1.3e+02 3.8 3.8 1 23 64 87 64 87 0.81

2 14 6.7e-05 0.0083 17.0 2.8 2 23 175 197 174 197 0.96

3 14 0.00093 0.12 13.4 0.2 2 23 210 231 210 231 0.98

4 14 5.8e-06 0.00072 20.4 2.3 2 23 234 255 233 255 0.97

5 14 0.00072 0.089 13.8 0.3 1 23 261 283 261 283 0.96

6 14 1.4e-05 0.0017 19.2 4.3 2 23 290 311 289 312 0.95

7 14 0.036 4.5 8.4 3.7 5 23 325 343 324 343 0.97

8 14 7.2e-06 0.0009 20.1 1.5 3 23 350 371 349 371 0.97

9 14 0.0033 0.41 11.7 0.3 2 23 387 407 386 407 0.97

10 14 2.2e-05 0.0027 18.6 0.7 1 20 413 432 413 435 0.92

11 14 2.7e-05 0.0034 18.3 2.7 1 23 443 465 443 465 0.99

12 14 0.00076 0.094 13.7 3.2 1 23 471 493 471 493 0.97

13 14 1.4e-06 0.00017 22.3 3.9 1 23 499 521 499 521 0.99

14 14 0.00047 0.059 14.4 6.3 1 23 527 549 527 550 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1	1.3e+02	3.8	3.8	1	23	64	87	64	87	0.81
2	14	6.7e-05	0.0083	17.0	2.8	2	23	175	197	174	197	0.96
3	14	0.00093	0.12	13.4	0.2	2	23	210	231	210	231	0.98
4	14	5.8e-06	0.00072	20.4	2.3	2	23	234	255	233	255	0.97
5	14	0.00072	0.089	13.8	0.3	1	23	261	283	261	283	0.96
6	14	1.4e-05	0.0017	19.2	4.3	2	23	290	311	289	312	0.95
7	14	0.036	4.5	8.4	3.7	5	23	325	343	324	343	0.97
8	14	7.2e-06	0.0009	20.1	1.5	3	23	350	371	349	371	0.97
9	14	0.0033	0.41	11.7	0.3	2	23	387	407	386	407	0.97
10	14	2.2e-05	0.0027	18.6	0.7	1	20	413	432	413	435	0.92
11	14	2.7e-05	0.0034	18.3	2.7	1	23	443	465	443	465	0.99
12	14	0.00076	0.094	13.7	3.2	1	23	471	493	471	493	0.97
13	14	1.4e-06	0.00017	22.3	3.9	1	23	499	521	499	521	0.99
14	14	0.00047	0.059	14.4	6.3	1	23	527	549	527	550	0.96

Sequence Information

Coding Sequence: TTGTACATGGGTCAAGAATCTTCGCGTATGTCCACCTCTTACGATCTGTTGGCTCGAGAAAGCTGGGAAGAATCAGAAGGATCCGATAACGAGATCAGCGGGCCATTATTGGATAGTAGATCGTTGGCCACACACTTTACTTCGAGTTTGTTTCTGGATCGGGATCGGAAGACACCGACCAAACGAACATTCAAGTGTTCCCACTGTAGCGAAGTGTTTGATTGTCCGAAGGAACGTAGAGTTCATAGCACAACGGTGCATAAGGATGCAATGCCCAGTAGTAGCAGAGATCAGTTGGATCAACCAGAAGTAAAGGACATTAAATTGCTGGATAGTCGCATGAATATGTTCGACGATATATTCATGCCGAGTATACATATGCAACAGCACATGTATCATCATCAGCAACCGATGTTGCACCAACTGCAGCCACCGACACAGCCTGGATCGGACGGTTTGACGAAGGCCGAGGCCGACCAGAAGATTGGCGAGAATCTAGTGATACCGTCGAATATTGAGGTGGTCTGCACGATATGCAATCAGCGATTCAATAGCGAGAAGTCTCTGCAGACGCATCACCGACGCATGCATATCGCCGATGTGAACAAACGCATACGCGAGACCGCCAAGTGCCAGATATGTAACGAGGAATTTCCATCAGTGTTCCTGTTCAATGCTCATTTGAAGATACATCCGTTAGAGTGCGGACAGTGTGGCAAGTATTTTTATCGCAAGCAGAACTTCAAACTTCACATGAAACGTCACCTGGGCATCAAACCGTTCCCATGTACCGTGTGCGACAAGGCGTTTCTCACTAAGCAAAAACTAGAGGAGCACACCAATGGCCACACTGGCAACGCGCCCGTCAGATGTAGTCTGTGCAATGAAACTTTCCGCAGATATTCGAATTTGACCCAGCACAAAAACAGGCATCACCTTAATATCAAGAAGAAGCTTAAAGATTACATATGCCACTGCGGCGAAGTATTCCATACGAAGAAGAAGCTTGCCTGGCACAAGGAGACGCACGATGAGAAGCCCAAGGCGTGCACGTATTGCAATGAGCGATTTATCCACATGGCTAGCCTGACGCGTCATATGCGTCGCGCCCACAATCGCCGATTCGTTCCCGACGCTCAGCGCGAAAGCGAGAACGTCGAGTGTCCGATCTGCAAGTGTATTTACTTGCGATCGTCGCTGGCGGTACATATGCGTGTGCACAACGGCGAGCGGCCATATGAGTGTCAGGTCTGCTCCAAAGCGTTCAGCACTAAGTGGAATCTGCAGCTACACAAGTGGACGCATGCAGCGCGCAGCACCAAACCGTTCAAATGTAATCAATGCAGCGCGGCATTCTACCGTCATAGCGACTACACGGCGCACATGAATTCTCATCGGAACGTGCGGCCATACACGTGCAACTACTGCGGCGCGCAATTCATTCGCAAGTACAACTGTCTACGACACGTGAAGGAACACGAGGAGAACAAAGCGTACACGTGCGATGTGTGCAACAAGACCTTCCATCGCTCGTACTATCTTAAAGAGCATTTGCGGGTGCACTCGGGTGCGCGGCCATATACGTGTCACATCTGCGGCAAGTCCAGTGGCACCAAATCCAATCACAACAAGCACGTGCGAATTCATCACGCGCGCGAGCCTGTAAATACCGAGAATTGA
Protein Sequence: LYMGQESSRMSTSYDLLARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCSEVFDCPKERRVHSTTVHKDAMPSSSRDQLDQPEVKDIKLLDSRMNMFDDIFMPSIHMQQHMYHHQQPMLHQLQPPTQPGSDGLTKAEADQKIGENLVIPSNIEVVCTICNQRFNSEKSLQTHHRRMHIADVNKRIRETAKCQICNEEFPSVFLFNAHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLEEHTNGHTGNAPVRCSLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389664;
90% Identity: -
80% Identity: -