Basic Information

Insect: Atta texana
Gene Symbol: -
Assembly: GCA_004480015.1
Location: QEPB01048116.1:9590-15879[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0045 13 6.4 2.2 3 43 59 102 57 103 0.82

2 12 7.2e-05 0.21 12.2 0.1 2 28 119 143 118 158 0.75

3 12 0.00021 0.61 10.7 0.5 5 39 175 208 173 215 0.92

4 12 0.00054 1.5 9.4 2.3 10 43 281 320 278 321 0.92

5 12 3.6e-06 0.01 16.3 0.1 2 40 337 372 336 375 0.82

6 12 0.0059 17 6.1 0.4 5 39 393 426 391 436 0.85

7 12 0.0044 13 6.4 6.8 3 43 499 544 497 545 0.91

8 12 5.3e-10 1.5e-06 28.6 1.2 2 44 561 600 560 600 0.90

9 12 0.035 1e+02 3.6 0.0 5 38 618 650 616 650 0.69

10 12 0.004 12 6.6 6.0 3 44 722 768 720 768 0.90

11 12 3.2e-10 9e-07 29.3 1.2 2 44 784 823 783 823 0.93

12 12 0.057 1.6e+02 2.9 0.0 5 23 841 858 839 873 0.71

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0045	13	6.4	2.2	3	43	59	102	57	103	0.82
2	12	7.2e-05	0.21	12.2	0.1	2	28	119	143	118	158	0.75
3	12	0.00021	0.61	10.7	0.5	5	39	175	208	173	215	0.92
4	12	0.00054	1.5	9.4	2.3	10	43	281	320	278	321	0.92
5	12	3.6e-06	0.01	16.3	0.1	2	40	337	372	336	375	0.82
6	12	0.0059	17	6.1	0.4	5	39	393	426	391	436	0.85
7	12	0.0044	13	6.4	6.8	3	43	499	544	497	545	0.91
8	12	5.3e-10	1.5e-06	28.6	1.2	2	44	561	600	560	600	0.90
9	12	0.035	1e+02	3.6	0.0	5	38	618	650	616	650	0.69
10	12	0.004	12	6.6	6.0	3	44	722	768	720	768	0.90
11	12	3.2e-10	9e-07	29.3	1.2	2	44	784	823	783	823	0.93
12	12	0.057	1.6e+02	2.9	0.0	5	23	841	858	839	873	0.71

Sequence Information

Coding Sequence: ATGCAAACAATGACACAACCAAGGACACAACAGTCTATAATTACTGAAAATGCAAATACAAACTCCCATCatgatgatataaataagCAACCTTCTCGAAATGAAGATCAACAAAGCAACACATCACGATACTGTGCGGATTTAATGGCAGCTCTACAAGGATCAGATAATTGGGTGTGGGAACAtcttaaattagataattctAATGTACGATGCAAAAGTTGTAttcaaacttataaaattggcaaaaaaaataaacttattgatATGATAGTGATAATAAAAGCACATTTATACCATAAGCATGAAATATGGAATAAAGAAGATCGCTTAAAATGGGAAAACGATAATGACTTGATATGGCGATACTTCGACAAAGTAGGCTTATACGAAgcgaaatgtaaattttgtgaCCGTTTACTTCGTCAACCATATGTACCACTTATAAAGTCGCATCTGCAAAATCATCATCAAGAAATAAGAGCTGGTGTACGAAAAGAAATTGCGGATAAATCTCTATcgcaatatttcgaaatttatgaGAAAGATTTTAGTGCACGGTGCAAACGTTGCAATGTTGAAATCGGCATATATTACGGAACAGATGCCTTAATACATCACatttgtttcaaaaagaatCAATCTTTAGGATCTCAACAAGaatttgatgataatgatatGAACAGAATGACACAACAATCTGCAGCCGATGAAAGTACAAGTTCACATGATATAAATAGACAAGTTTCTggaaatgaagaaaatgaacAAAGTAACACACGATACTGTGCGGATTTAATGGCAGCTCTAGAAAGATCGGACAATTGGGTGTCACAACAtcttaaattagataattctACTGTACAGTGCAGAAGTTGTAttcaaacttataaaattggcaaaagaagtaaatttattgaaatgataACAATGATAAAGGCACATTTATACCATAAGCATGAAATATGGAATGAAGAAGATCGTTTAAAATGGGAAAATGACAATGACTTGATATGGCAATATTTCGACAAAGTAAGCTTATACGaagcaaaatgtaaattttgtgaTCGTTTACTTCGTCAACCATATGTATCACTTATAAAGTCGCATCTGCAAAGTCATCGTCAAGAAATAAGAGCTAGTGTACGAAAAGAAATTGCGGATAAGTCTCTATcgcaatatttcgaaattcatGAGGAAGAATTTAGTGCACAGTGCAAAAGTTGCAATGTTGAAAACGACATATTTTACGGAATAGATGCTTTAATACAtcacatttgttttaaaaataatcaatcttTAAGATCTCGACAAGAAACTGATAATAATGATGTGAACAGTATGACACAACAATTCATAGCCAATGAAAATACAAGTACAAGTTCACATCATGATATAAATAGACAAACTCCTAGAAAtcgagaaaataaacaaagtaACACATCGCGACAGTGTGAGGATATAATGGCAGCTCGACAAAGATCAGACAATTGGGTGTGGAAACATGgtcttaaattaaacaattctaCTATACGGTGCAATATAGATAAATGtaatcaaacttattatagtaaacataaaaatgtaagtatattgataaaatcgatgaaagtacatttatatcataaGCACGAAATATGGACTGAAGAAGATCGCTTAAAATGGGAAAACAACAATGACTTGATATGGCAATATTTTGACAAAGTAGACTTATACAaaggaaaatgtaaattttgtaagaattttcGTCATGGAgcatatatacaaaatctaAAGTCGCATCTGCGAAGAAAGCATAGTCAAGAAATAAGAGCTgctatacaaaaagaaatttcatttaagtCGCTATcgcaatatttcgaaattcaaGAGGAAGAATTTAGTGCACGATGCAAACGTTGCAATGTTGAAAAGGACATATTTTACGGAATAGATGCTTTAATACGTcacaattgttttaataagaatCAACGTTTAAAGTCTCGACAAGAACCTGAAGATAATGATGTGAACAGGATGACACAACAATCTATAGCCGATGAAAATACCAGTACAAGTTCACatcatgataatataaataaacaagctCCTGAAAATCGAGAAAATGAACAAagTAACACATCGCGACACTGTGCGGCTGCTCGAAGAAGATCAGACAATTGGGTGTGGAAACATGTTGTTAAATTAGACAATTTTACTGTAAAGTGCGAAATAGATAGttgtaataaaacttattatgatagtactaaaaattcatgtagaacgataagaatgataaaaggACATTTATACCATAAGCACAAAATATGGACCGAAGAAGATCGCTTAAAATGGGAAAACAACAATGACTTGGTGTGggaatattttgacaaaatagaCTTTTACAaaggaaaatgtaaattttgtaagaatatTCGTCATGaagcaaatatacaaaatctgAAGTCGCATTTGCGAAAAAAACATAGTCAAGAAATAAGAGCTgctatacaaaaagaaattgcatATAAGTCGCTATcgcaatatttcgaaattcaaGAAGAAGAATTTAGTGCACGGTGCAAACGTTGCAATATTGAAAAGGACATATTTTACGGAATAGATGTCTTAATACGTCACAATTGTTTTGATAAGACTCAACTTTTGAAATCTGGACAAGAATCTGAAGACAATAAGATGAACAGAATGACACAACAGTCTATAGCCACTGAAAATACAAACTTCCATCATGATGATATAAATAGGCAAGTTCCTCAAAATCAAGATCAACAAAGCAACAcaggaataaataatttaagatctGACTctcattatcatataaataaaaattcgagaTCTAAAGAAGGAGATGCTGCAGATAATAGCGAGTATATGCAGCAAGACGTAGCAGCAGAAAATATGGCTACACATTATcatgaaaatacatattggCATGATCTTGAAAATCAAGATCAACAGAGtgaATGTATATCAAGTTCTGGAGGAAATAACGCGAATAACATAGTATTCCTTGCTCATGATGTTTCGGATGTAAGTTCTCATCATGACGATACAAACTGGCAAGCTCTTGGATATCAAATAGATCAACAGAGaatGATGCAGCAAGACGTAGCAGCAGGAAATATGGTTACACATTATCATCATGTAGGTACATTTTGGCATGGTCTTGAAAATCAGGAAAATCAACAGAGttCTGAAGGAAATAACACGAATAACACAATATTCCTTGCTCATGATGTTTCGGATGTAAGTTCTCGTCATGATGGTACAAACTGGCAAGATCTTGGATATCGAATAGATCGACAGAGaatGATGCAGCAAGACGTAGCAGCAGAAAATATGGTTACACGTTATCATCATGTAGGTACATTTTGGCATGGTCTTGAAAATCAAGATCAACAGAGGTAA
Protein Sequence: MQTMTQPRTQQSIITENANTNSHHDDINKQPSRNEDQQSNTSRYCADLMAALQGSDNWVWEHLKLDNSNVRCKSCIQTYKIGKKNKLIDMIVIIKAHLYHKHEIWNKEDRLKWENDNDLIWRYFDKVGLYEAKCKFCDRLLRQPYVPLIKSHLQNHHQEIRAGVRKEIADKSLSQYFEIYEKDFSARCKRCNVEIGIYYGTDALIHHICFKKNQSLGSQQEFDDNDMNRMTQQSAADESTSSHDINRQVSGNEENEQSNTRYCADLMAALERSDNWVSQHLKLDNSTVQCRSCIQTYKIGKRSKFIEMITMIKAHLYHKHEIWNEEDRLKWENDNDLIWQYFDKVSLYEAKCKFCDRLLRQPYVSLIKSHLQSHRQEIRASVRKEIADKSLSQYFEIHEEEFSAQCKSCNVENDIFYGIDALIHHICFKNNQSLRSRQETDNNDVNSMTQQFIANENTSTSSHHDINRQTPRNRENKQSNTSRQCEDIMAARQRSDNWVWKHGLKLNNSTIRCNIDKCNQTYYSKHKNVSILIKSMKVHLYHKHEIWTEEDRLKWENNNDLIWQYFDKVDLYKGKCKFCKNFRHGAYIQNLKSHLRRKHSQEIRAAIQKEISFKSLSQYFEIQEEEFSARCKRCNVEKDIFYGIDALIRHNCFNKNQRLKSRQEPEDNDVNRMTQQSIADENTSTSSHHDNINKQAPENRENEQSNTSRHCAAARRRSDNWVWKHVVKLDNFTVKCEIDSCNKTYYDSTKNSCRTIRMIKGHLYHKHKIWTEEDRLKWENNNDLVWEYFDKIDFYKGKCKFCKNIRHEANIQNLKSHLRKKHSQEIRAAIQKEIAYKSLSQYFEIQEEEFSARCKRCNIEKDIFYGIDVLIRHNCFDKTQLLKSGQESEDNKMNRMTQQSIATENTNFHHDDINRQVPQNQDQQSNTGINNLRSDSHYHINKNSRSKEGDAADNSEYMQQDVAAENMATHYHENTYWHDLENQDQQSECISSSGGNNANNIVFLAHDVSDVSSHHDDTNWQALGYQIDQQRMMQQDVAAGNMVTHYHHVGTFWHGLENQENQQSSEGNNTNNTIFLAHDVSDVSSRHDGTNWQDLGYRIDRQRMMQQDVAAENMVTRYHHVGTFWHGLENQDQQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00181447;
90% Identity: iTF_00181447; iTF_00182108;
80% Identity: -