Basic Information

Insect: Atta colombica
Gene Symbol: ZFX
Assembly: GCA_001594045.1
Location: NW:1224093-1230380[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.5 77 3.2 0.1 3 23 15 35 14 35 0.94

2 15 2.8 1.5e+02 2.4 3.8 1 23 974 997 974 997 0.81

3 15 8.1e-05 0.0043 16.6 1.9 2 23 1085 1107 1084 1107 0.96

4 15 0.0025 0.13 11.9 0.2 2 23 1120 1141 1120 1141 0.98

5 15 1.6e-05 0.00083 18.9 2.3 2 23 1144 1165 1143 1165 0.97

6 15 0.0019 0.1 12.3 0.3 1 23 1171 1193 1171 1193 0.96

7 15 3.8e-05 0.002 17.7 4.3 2 23 1200 1221 1199 1222 0.95

8 15 0.096 5.1 7.0 3.7 5 23 1235 1253 1234 1253 0.97

9 15 2e-05 0.001 18.6 1.5 3 23 1260 1281 1259 1281 0.97

10 15 0.0089 0.47 10.2 0.3 2 23 1297 1317 1296 1317 0.97

11 15 5.9e-05 0.0031 17.1 0.7 1 20 1323 1342 1323 1345 0.92

12 15 7.3e-05 0.0039 16.8 2.7 1 23 1353 1375 1353 1375 0.99

13 15 0.002 0.11 12.2 3.2 1 23 1381 1403 1381 1403 0.97

14 15 3.7e-06 0.0002 20.8 3.9 1 23 1409 1431 1409 1431 0.99

15 15 0.0013 0.068 12.9 6.3 1 23 1437 1459 1437 1460 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.5	77	3.2	0.1	3	23	15	35	14	35	0.94
2	15	2.8	1.5e+02	2.4	3.8	1	23	974	997	974	997	0.81
3	15	8.1e-05	0.0043	16.6	1.9	2	23	1085	1107	1084	1107	0.96
4	15	0.0025	0.13	11.9	0.2	2	23	1120	1141	1120	1141	0.98
5	15	1.6e-05	0.00083	18.9	2.3	2	23	1144	1165	1143	1165	0.97
6	15	0.0019	0.1	12.3	0.3	1	23	1171	1193	1171	1193	0.96
7	15	3.8e-05	0.002	17.7	4.3	2	23	1200	1221	1199	1222	0.95
8	15	0.096	5.1	7.0	3.7	5	23	1235	1253	1234	1253	0.97
9	15	2e-05	0.001	18.6	1.5	3	23	1260	1281	1259	1281	0.97
10	15	0.0089	0.47	10.2	0.3	2	23	1297	1317	1296	1317	0.97
11	15	5.9e-05	0.0031	17.1	0.7	1	20	1323	1342	1323	1345	0.92
12	15	7.3e-05	0.0039	16.8	2.7	1	23	1353	1375	1353	1375	0.99
13	15	0.002	0.11	12.2	3.2	1	23	1381	1403	1381	1403	0.97
14	15	3.7e-06	0.0002	20.8	3.9	1	23	1409	1431	1409	1431	0.99
15	15	0.0013	0.068	12.9	6.3	1	23	1437	1459	1437	1460	0.96

Sequence Information

Coding Sequence: ATGGAGCTCAATGGTACGGGAACATCCGTCGGGGCCATGGCCTGTCCCGTGTGTACCCTGTATTTACGCGAGGGCATCAGTTTGCAGAAGCATTTGGATACTCATCCCAAGGAACAGGTTATAGATGCTCTCATCAAAGCCAGTACCCCTTCGTTACAGAcgcaacagcaacagcagcaccagcagcaacagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcagcagcaacagcatgCTTTATCAGCATCAGCAGCAACATCATTACCATTATCACTGCAGGCACAAGCTGCACTTCAGACTCCTACCTCCATCCAGACGCCCCATACGTCCTCCCAAGTCTCGCAGAACGCGCATATTTCTACTCACTCTCCATATCCTGTAGGACCCATTTTTGAATGTCCACCCATAAGTACCATGATGCCACCGCAGTTCACCTCATTCAGCTATCAGCAATTCGTGAACAATGGGACCATGATGATACCACAGTACGCGATGGCGCCGCAAGCCAATCAAATGATGCAGATGCTGTACAATCCATACGGTATGTACCAACAGCAAATACCCACCGTCCAAATGATCTCACCAGTTGCAGCTGTTCTTGGCGCAACGACAAGGATTCGGCCAGTGGTTACTATAGCTGGTGAGAGCAACGTCAGAACACTGACGGTTCCTGTAAATAGTCCCGAGCCGAAACAGATTCTACCTGAGATTTTGCCGGAGACGGATACCGAATCAGGACAAGTTATTCCGGATGTAAGTCTCTCGGTATCGCCCGTGCTGCACAACGAGGATACATCCATCAGAGTGAGGGAAGAGAGCGACAACAGCGCGCTGTCAATCGATCACCGGGGACAGCAAGCACAGAGTTCTATATCACCCGACGATAGCACCGTACACGAATACAATGCTATTTCTAGATCTATTACAATTTCTTGCGCTATTGATAACACTGATGAGAAAGTGGAGAGTGTATTACCAGATATGGTAGACGATGAgccatcaaataatatttcgacCACAGACTTACAATGTAAATCTGCAACATACGAGCAACCAGAAACACAACAGTTTACACAGCAGGTCATCGAAGAGGGATACGTGAATGTATCCGATAGAATGACACCCACAATTGACATTGAATCTGTGGCTTGTGAACATGATTCGGAAATGATATGTGACAATAGAACCGCAAGTCGCAGCAGCAACGTGAACGATAATGTTGAATCACCGCAGGATCTAGTAGCAATAGATACGTTGAAAGACTCTGTTCAATCCGAGTTTAACTCTTCagaaaaattagagaatttaATAACCATAATGGAGACGGAGCTCAATAATGCTTCTCTtcagaaagaaaatgatatacaAAATGATCAAGAAAAATTGGCGGACCCGAAAGAAAAAACCACTGTAGATAGGGAAGAGAGCGTGATTCACGATACAGTAGTCATTCCGGATTCCCACGAGAAGGATCACATATTGTCGGACGTGCAGGAAGGGGACAAGTGGGACTCGAGCAATTCCTTGACTAACGAACTGAGATTGTTAGAAAAAACTTATTCGCCACATACAATAGACTgtttgaaaatgaatgaagcGCTGGATAGACTGCAAAGAACTTttcattctaataattataaatatagtttttcaGCTCCTGCGTCTCCAGTCGCGAGAAGGAAGAGCCGCAAGGTCCGTCGTTATAACTCGCGATCGGAACATGGGTCGTGCGAGAATCTTAGTGTGTATCGTCTCCGTGCTGATTTTGATGACACCGCGGCCAtgcacgacgacgacgatgacgaagACGATGACGAGGACGACGAGGATGTTGATGAGGACGAGAAGATCGACGAGGAGGACAATTTTGACGAGGCGGACATGGAGATTGAAGAGATTCCCAGTCCTCACACACCTTTCGCGGATTGTGGCGTGAGATCGCACACCCCATTGTCCACCATCAGTGGTATTTCCGTGTTAAGAGTTAGAAAGGATCTCAGCAAGCCATGCTCACCCACGTCCATGCATTCGTTTCATCACGTGGACAGCGATAGCGCAACTCACGACGAGGATAGTAACGGCGTAGGTAATGTCACAGAAAAAGATCCGATCGACTGTTCACAGATAGACGAGGAGAAAATTAAGACTGATAATCAGCGTCAGGAGACGCAGGTGGCGGTGTGCGAAAGTGTCGCAAAGATTCAAGAATCGAGCAGCAGTTACGCGTATCATCAATCAGTGATAACCGAACACATTAGTTCATTTCCCGTGATACATTCACAATCATCCGTCTTGATGCACGAGTCATATTCCATTACGACCAGCACCAAGACTCAAAACCTCTTGAATCTCTCCGAATCAATAAATCCCACAACCAGTACCGAATCCAGAAGCTTTCACTCCGCCAAATCATTGATGCCGAAGCAATCGATGGAACTGCTCAATATAAATGAAGATGCTCACGCTGGGCCAATGAATGTCTTTGAATTCGACGGACTGCAAATATTAGTTCCTAGTACATTTATAAGTGACTCGTCCCAGAAAGCGGTGAGTGCGACCAGCCAGCAATCTATGGCAAGTAGCGAGGGTGCAATAGGTATCGACGAGGAGGTGAAGAGTATTAATATGCGTGCCGATGAGACTATGCCGCCTAGGGGCGAATTATCAGAACAAGAGAGTAATGGATGCACGGAGCAGTCCGCATGGCAGTTGTACATGGGTCAAGAATCTTCGCGTATGTCCACCTCTTACGATCTGTTGGCTCGAGAAAGCTGGGAAGAATCAGAAGGATCCGATAACGAGATCAGCGGGCCATTATTGGACAGTAGATCGTTGGCCACACACTTTACTTCGAGTTTGTTTCTGGATCGAGATCGGAAGACACCGACCAAACGAACATTCAAGTGTTCCCACTGTAGCGAAGTGTTTGATTGTCCGAAGGAACGTAGAGTTCATAGCACAACGGTGCATAAGGATGCAATGCCCAGTAGTAGTAGAGATCAGTTGGATCAACCAGAAGTAAAGGACATTAAGTTGCTGGATAGTCGCATGAATATGTTCGACGATATATTTATGCCGAGTATACATATGCAACAGCACATGTATCATCATCAGCAACCGATGTTGCACCAACTGCAGCCACCGTCACAGCCTGGATCGGACGGTTTGACGAAGGCCGAGGCCGACCAGAAGATCGGCGAAAATCTAGTGATACCGTCGAATATTGAGGTGGTCTGCACGATATGCAATCAGCGATTCAATAGCGAGAAGTCTCTGCAGGCGCATCACCGACGCATGCATATCGCCGACGTGAACAAACGCATACGCGAGACCGCCAAGTGTCAGATATGTAACGAGGAATTTCCATCAGTGTTCCTGTTCAACGCTCATTTGAAGATACATCCATTAGAGTGCGGACAGTGTGGCAAGTATTTTTATCGCAAGCAGAACTTCAAACTTCACATGAAACGTCACCTGGGCATCAAACCGTTCCCATGTACCGTGTGTGACAAGGCGTTTCTCACTAAGCAAAAACTAGAGGAGCACACCAATGGCCACACTGGCAACGCACCCGTCAGGTGTAGTCTGTGCAATGAAACTTTCCGTAGATATTCGAATTTGACCCAGCACAAAAATAGGCATCACCTTAATATCAAGAAGAAACTTAAAGATTACATATGCCACTGCGGCGAAGTATTCCACACGAAGAAGAAGCTTGCCTGGCACAAGGAGACGCACGATGAAAAGCCCAAGGCGTGCACGTATTGCAATGAGCGATTTATCCACATGGCTAGCCTAACACGTCATATGCGTCGCGCCCACAATCGCCGATTCGTTCCCGACGCTCAGCGCGAAAGCGAGAACGTCGAGTGCCCGATCTGCAAGTGTATTTACTTGCGATCGTCGCTGGCGGTACATATGCGTGTGCACAACGGCGAGCGGCCATATGAGTGTCAGGTCTGCTCCAAAGCGTTCAGCACCAAGTGGAATCTGCAGCTACACAAGTGGACGCATGCAGCGCGCAGCACCAAACCGTTCAAATGTAATCAATGCAGCGCGGCATTCTACCGTCATAGCGACTACACGGCGCACATGAATTCTCATCGGAACGTGCGGCCATACACGTGCAACTACTGCGGCGCGCAATTCATTCGCAAGTACAACTGTCTACGACACGTGAAGGAACACGAGGAGAACAAAGCGTACACGTGCGATGTGTGCAACAAGACCTTCCATCGCTCGTACTATCTCAAAGAGCATTTGCGGGTGCACTCGGGTGCGCGGCCATATACATGTCACATCTGCGGCAAGTCCAGTGGCACCAAATCCAATCACAACAAGCACGTGCGAATTCATCACGCGCGCGAGCCTGTAAATACCGAGAATTGA
Protein Sequence: MELNGTGTSVGAMACPVCTLYLREGISLQKHLDTHPKEQVIDALIKASTPSLQTQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQHALSASAATSLPLSLQAQAALQTPTSIQTPHTSSQVSQNAHISTHSPYPVGPIFECPPISTMMPPQFTSFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQIPTVQMISPVAAVLGATTRIRPVVTIAGESNVRTLTVPVNSPEPKQILPEILPETDTESGQVIPDVSLSVSPVLHNEDTSIRVREESDNSALSIDHRGQQAQSSISPDDSTVHEYNAISRSITISCAIDNTDEKVESVLPDMVDDEPSNNISTTDLQCKSATYEQPETQQFTQQVIEEGYVNVSDRMTPTIDIESVACEHDSEMICDNRTASRSSNVNDNVESPQDLVAIDTLKDSVQSEFNSSEKLENLITIMETELNNASLQKENDIQNDQEKLADPKEKTTVDREESVIHDTVVIPDSHEKDHILSDVQEGDKWDSSNSLTNELRLLEKTYSPHTIDCLKMNEALDRLQRTFHSNNYKYSFSAPASPVARRKSRKVRRYNSRSEHGSCENLSVYRLRADFDDTAAMHDDDDDEDDDEDDEDVDEDEKIDEEDNFDEADMEIEEIPSPHTPFADCGVRSHTPLSTISGISVLRVRKDLSKPCSPTSMHSFHHVDSDSATHDEDSNGVGNVTEKDPIDCSQIDEEKIKTDNQRQETQVAVCESVAKIQESSSSYAYHQSVITEHISSFPVIHSQSSVLMHESYSITTSTKTQNLLNLSESINPTTSTESRSFHSAKSLMPKQSMELLNINEDAHAGPMNVFEFDGLQILVPSTFISDSSQKAVSATSQQSMASSEGAIGIDEEVKSINMRADETMPPRGELSEQESNGCTEQSAWQLYMGQESSRMSTSYDLLARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCSEVFDCPKERRVHSTTVHKDAMPSSSRDQLDQPEVKDIKLLDSRMNMFDDIFMPSIHMQQHMYHHQQPMLHQLQPPSQPGSDGLTKAEADQKIGENLVIPSNIEVVCTICNQRFNSEKSLQAHHRRMHIADVNKRIRETAKCQICNEEFPSVFLFNAHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLEEHTNGHTGNAPVRCSLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523563;
90% Identity: iTF_00016218;
80% Identity: -