Acoo008253.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- lilli
- Assembly
- GCA_001594045.1
- Location
- NW:1127609-1346228[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 5.3e-06 0.052 11.9 0.2 49 111 85 145 70 173 0.63 2 7 5.9e-11 5.9e-07 28.3 2.9 339 443 262 363 243 379 0.74 3 7 0.18 1.8e+03 -3.0 25.2 449 503 446 495 424 526 0.51 4 7 1 9.9e+03 -22.5 42.4 101 250 535 676 498 719 0.39 5 7 1 9.9e+03 -7.2 14.3 438 488 734 784 689 806 0.44 6 7 0.045 4.5e+02 -1.1 11.0 74 268 923 1115 914 1126 0.46 7 7 0.078 7.8e+02 -1.8 15.3 126 277 1208 1356 1177 1363 0.42
Sequence Information
- Coding Sequence
- ATGCCGAGCCACAAGCCAGCGCAAGCCATGAAGAAGCCGCCACGcGTGGAACGGGACCGGCTTCGGGAGCGAGATCGACTGGCCCGCGCGGCGATGTCGGTCCAAGCGGAGCAGGCGGCTGCGGGAAGTGGTCCTGATATGAGACACCATCATCATCACCATAACCACGCGCATCATCACTCCAATATACATCTCTCCACACATGATGCTCTTTCGCTCTTCCGTGCCCCTGTTAGGgtGAATCCTGATCCACAAATCCAGTCTAAGCTGGGCAACTATTCGCTGGTGAAGCATCTACTCGATAAGCCTAAGCGCCTGTTCGGCATCGAACAGAGTGGCATCCCGCAGAGTCCGGCGCCTTCGCCGACGCCCTCCGCCCACAAGTCGGGCACGGACAGCTCTGGCAGAAGCTGTTCCCCGTCCTCGGGGCCGGAGTTCAAGAAGCCTGGTGGACTTCGGGGCACGAGCGCCGCGTCTTCCTCGTCGAGTGCAAGTCACCAGCGGGGCGGCTTCGTCAAACCTGCCGACGGCAAACCGCCTTATGGTGGTCGGGGTGGTTATCCTGGCCAACCAGTTAAGCACGGCGGCAACGATCATCGCAGCCATGGGTTACTTCCGGCTAAGGGCCCGCCGTTGCCTCAACCATCCTCTACCGGGGGAAGCAACGGCACGGTACCGATCAACAATTCCAGCGGAAGTGTTGCCGGTAACCCCGGCGGCAGTAGTCTCTCAAGCCGCACTCAATTCGCCTGTCGATTGAAGCTGATTGAAGTTAACGGGTCTAACTCGCGAGCATCGATTGATACTCCAGACGTAGAAAACATTTTGAAGGAGATGACTGTGCCACTTACACCACTGACGGCGATCGCGCAGACACCGCGAAAGGAGCAGGAATCCAAGTTCACCTTCAACCCTCATCTGGCGAAGtTGACAGAAGTCGCCCCACCAGAGCCTGTAAAGTCATCTCAACGCCAGCATACCGCCATCAAACCACTTGCGAATATCGCGGAGGATCTGATTTTGTCGGATGAAGAGAGCGAGGATGAGGAGAACAAGGAAACATCATCGAGACCGACGAGAGGAAACAGGAGTCCGGATCTCACGGTCGTTCTATCGACACCATTGATGACATCGGCGCCGCCACCTTTGACACCTATGTCGCCCATGATCATGTCACCCGTGGGCCCATTGTCACCCTCGCGGCCGATCAGTCCGTCGAGATACTCGTCGCCACCACCAAAACGGACGACACCGGAGCGAGTGCTGTCTCCTCCAGCGGGTATCAATCATCCCCTGCCATCCGCGTGTTCCCCGACGAATCCGGTTGTCGTCGGCCAACCGTCGAGTCCAGCCGAGGCGCCGCATAGCTCCGGAAGCGCCAGCTCGAGCTCAGATTCGGGTTCAGATTCTGGCTCGGACAGCAGCGATGATTCCGAGGACGAAGACGACTTGACCTCAGCACCGCCGCCATCCAAGGGGCCTACGACACCACCTTCGATTTCACCGAAGCAGGATAATCTGGTAGAACCGCCGCCTGCTGAGGAACCTCGTCGTTGGGACCTCATTTCTTTTCTGCAGCAGAATGGCAATCAGAATGCCGAATCGAAACCTGCTCAGGATAATACCAGACGGGAGAATACGCATGAAATAACGACGGAGACCAGATCACACAGAGAACAGTCTCATGATTGGCAGCTCGGTGAGGCCTTGAAGAGGTCTCATGTGAGTTCTCTCAGTGACAGCGATCATCATTCTGATCAGGAAAAGAATCAATTGGTTGAAGACAATCGCGCTCAGACGGAGAAGCCAAAAGTGGCCGATACTAAGAAACGTGGACGACCCAGGAAATCCATCAAGAGTCCGAAACGTAGTTGTCACCGGACATCGGACGAGAATCTGAAGAACAGTAAGTCCCGCAGCCGGACAAGAACGGTCGCCACTCCTGGCAAGAAAAAGCCACCCAAATCGAAGGAAACGGTGACCTCAAGTGACGACGACAATGATTCGAAATCGCAAAGTGATTCCGACAGTGATCGTCGACCTACCAAAGTAGTGTCGGCCGTAGTACCAACAAGAAACGAAAAGAGATCGAGACTGAGTCTGTCGTCTAGCGACGACGAGAGTTCGCCACCGAacaggaaaaataataatagtgccTCCGAGGACGACACCGCGCGATGGACAAGAATTCCCCCCATCAAGCGGAGCAATCTGTTGGACTCGCCGAAGAAACAGGATCAGAAGAAAAGTTCTGCCAAAGGCAAGCCTAGGCAGCCCAGATCTAGAGTGACCAATGTAACCGGCGGTTCGGATTCTGATAGTGAATCAGAGGTGTCTGTAAGGAGTAATCGCATCAAAGTCGCTcgAGTGCCACCCAGACCTCGAGCACCACCAACGAGGACGACCTCGCCTGATAACTCTGATAGCGATAACAGCCCGGCGTCAAAATTACAAGAGGATGACGCCGGCAATGTGCAGGACAAGAAGAAAAGCGACACGCTGCGCCACGTCTTCTCGACGTCGAGAGGCATCGGGAAGACGGGTGGTAAAGGTGGGAAAGGTGGAAAAGGCGGTGGTAAATGCGGTATCTACGTAGAAGAGTACACGAGTAATTCTGCTACGCACACACCGACGGGCGGGGACAGTCCGTATAAAAGACCGTCCTCGCGGACGTCCAGTGGTGGCAACAATCCTCTCCTACGCTCCCCTCCAGCGCTCACACATGTGAACGGCGTACCAAGTCTTATGTGCAAGATCGATCTCAGCAGGATATCTTCGCAAATTTTCTCGAATCTATCGAGAGGACAAGAGCTCAGACAACGCACGGAATTGCCTGACACTAGGCCATCTTCGAGACAAAGACCATCCTCCAGTTTGGCGACCTTGCAACCACCGAGGTCGTCCACGCCAGAGGAGGGTGAAATCATCGATACACCGCCTCCGCAACAGCAGATCGTGTCGGATCGTGCGAGAATCCATCGTTCCGACGGACTGCTAAGCGAGAGTGACGGCAAGATTTCACGTTCTGTGATCAAGGCCCAACCGATATCGTCGGATTCGAAGAACGGCGGTACTGTTCTTGGAGGTGCTGGTAGTGCTAATAGTGCCGGTACGCTTGGTAGCGCGCCTAAGAGGAAACGTAATCCGAGTTGTAGTTCCGTGTCTAGTTTGAGCCCTGTTCAGTGTTCGGTAGATGCGAAAACTAAGAATACATCCGAGCATAAAGACAGGAGCCGCAAGAGACAACGGAGACATGCCAACGACGGGCTAATGTCCAGTCAGcAGAGTGATATCCAACCGACGAATCACGAAAGGGACGAGAAACCAGATACTAGTTTATTACCGCCACCGCCTCTCCCAGCTCAGCGCGTCTACTATTCTTACTTCGATCctcaaaatgaaatattagaaGATCAGGATAgGGACCATGACCAGTACCTGACCGAAGCTAAGCGACTAAAGCACAATGCCGATGAAGAGAGCGATCTTACGGCACAAGGCATGATGTATCTAGAGGCTGCTCTGTATTTTCTTCTAACAGGCGATGCGATGGAATCAGACTCAGTTACAGAAAAAGCATCATACACTATGTACAAAGATACTCTTAGTCTTATCAAATACATCTCGTCGAAATTTAAGAGCCAATCGAACAATTCACCTGAGAATAGCATACACACTAAGCTGGCTATCTTGAGCCTTTGGTGTCAATCACGTTTGTATTCCAAATTATACAACATGCGCAAACAGGAAATGAAAGAGGTCCAGAAGATCGTCAATGACTTCAATCAAAAGcAATCTCAGCAATCAGCAGCTCAGATAATACCTGCTCAGGCGGAAGGACAGGGCACGCCTTCTCTTTCGCCAACACCATCGCCCGCTGGTTCTGTAGGTTCCGTCGGTAGTCAAAGTTCCTCCGGATATAGTAGCGGTGGACAACATCCGgcacaacaacaacaacaacaacaacaacaaccaCCGGTACAACAACCACCGGTACAACAACCACCGGTACAACAACCACCGGTACAACAACCACCGGTACAACAACTACCGGTACAACAACCACCGGTACAACAACCACCGGTCAATGGCCATATTAGTGTGCCATTACAAGTCTTCAATGCGATGGTAAAGCAAAATCAGTGTTCAGGCTTACTTATGAATGGCCACGACCTATGGGACCAGGCAATAAAGCAGGCGAGACAGGAAGAGAATAGAAGCTTTTTCATCGATTTGGATCGAAGATTGGGACCCTTGACATCGTATAGCTCACTACGTGAGCTTGTGCGTTACGTTCAAGCGGGTATAAAGAAATTGCGAGCTCTCTGA
- Protein Sequence
- MPSHKPAQAMKKPPRVERDRLRERDRLARAAMSVQAEQAAAGSGPDMRHHHHHHNHAHHHSNIHLSTHDALSLFRAPVRVNPDPQIQSKLGNYSLVKHLLDKPKRLFGIEQSGIPQSPAPSPTPSAHKSGTDSSGRSCSPSSGPEFKKPGGLRGTSAASSSSSASHQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNDHRSHGLLPAKGPPLPQPSSTGGSNGTVPINNSSGSVAGNPGGSSLSSRTQFACRLKLIEVNGSNSRASIDTPDVENILKEMTVPLTPLTAIAQTPRKEQESKFTFNPHLAKLTEVAPPEPVKSSQRQHTAIKPLANIAEDLILSDEESEDEENKETSSRPTRGNRSPDLTVVLSTPLMTSAPPPLTPMSPMIMSPVGPLSPSRPISPSRYSSPPPKRTTPERVLSPPAGINHPLPSACSPTNPVVVGQPSSPAEAPHSSGSASSSSDSGSDSGSDSSDDSEDEDDLTSAPPPSKGPTTPPSISPKQDNLVEPPPAEEPRRWDLISFLQQNGNQNAESKPAQDNTRRENTHEITTETRSHREQSHDWQLGEALKRSHVSSLSDSDHHSDQEKNQLVEDNRAQTEKPKVADTKKRGRPRKSIKSPKRSCHRTSDENLKNSKSRSRTRTVATPGKKKPPKSKETVTSSDDDNDSKSQSDSDSDRRPTKVVSAVVPTRNEKRSRLSLSSSDDESSPPNRKNNNSASEDDTARWTRIPPIKRSNLLDSPKKQDQKKSSAKGKPRQPRSRVTNVTGGSDSDSESEVSVRSNRIKVARVPPRPRAPPTRTTSPDNSDSDNSPASKLQEDDAGNVQDKKKSDTLRHVFSTSRGIGKTGGKGGKGGKGGGKCGIYVEEYTSNSATHTPTGGDSPYKRPSSRTSSGGNNPLLRSPPALTHVNGVPSLMCKIDLSRISSQIFSNLSRGQELRQRTELPDTRPSSRQRPSSSLATLQPPRSSTPEEGEIIDTPPPQQQIVSDRARIHRSDGLLSESDGKISRSVIKAQPISSDSKNGGTVLGGAGSANSAGTLGSAPKRKRNPSCSSVSSLSPVQCSVDAKTKNTSEHKDRSRKRQRRHANDGLMSSQQSDIQPTNHERDEKPDTSLLPPPPLPAQRVYYSYFDPQNEILEDQDRDHDQYLTEAKRLKHNADEESDLTAQGMMYLEAALYFLLTGDAMESDSVTEKASYTMYKDTLSLIKYISSKFKSQSNNSPENSIHTKLAILSLWCQSRLYSKLYNMRKQEMKEVQKIVNDFNQKQSQQSAAQIIPAQAEGQGTPSLSPTPSPAGSVGSVGSQSSSGYSSGGQHPAQQQQQQQQQPPVQQPPVQQPPVQQPPVQQPPVQQLPVQQPPVQQPPVNGHISVPLQVFNAMVKQNQCSGLLMNGHDLWDQAIKQARQEENRSFFIDLDRRLGPLTSYSSLRELVRYVQAGIKKLRAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01406484;
- 90% Identity
- iTF_00417549;
- 80% Identity
- -