Acoo002956.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- -
- Assembly
- GCA_001594045.1
- Location
- NW:476227-482675[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9 2.4e+03 -2.1 0.0 21 31 1067 1077 1057 1081 0.81 2 2 3.1e-09 1.9e-06 27.1 0.1 2 46 1421 1467 1420 1467 0.93
Sequence Information
- Coding Sequence
- atggaGGAATCAACAAATAAGCTTGTGCAAAATGACTCTGACATATTAACATCCTCGGTTTCCTTTACCGAATCACCCAAGAAATGCAACCTCTCTTTTTCAATTAACTTTGACTTTAACGACGTTAATAGTGAAAACTCAACTGATTCCGAAAATGCAGACTTACAAATCGACATATCCGAAGTGGATAATTATGAACCGTCTAGTAAACATAAGAGAGAAGCTGTTGAAGAAGCATCGGTACTTAATGAAATGGAAGAAGAGATTGAGAGACAACTTGATGCTAAAGCTGCCAAAACTAATTTAACTGCCACTAATGtcaaaaacattttgaaacacGTAATCCCCTATGAACATTTAATGACAATGGTACAAAAATGGCTTCAAGATactgaaaatgatattaatattggtCCTAAACTCACACGAGCTAAAGCTAAaaaattagcAGCTGCCAAAGTCGATATACTATGGCCTATCACTACAGCACAAAAAACTTCCTCTGAAGTACAAGCTTTAATTCAGGAGGAGCTACCAGAAGATTCATCTGATGAAGAATATAATCCTGAACATGATAAACAGAGTGACGATGATAGAGAAGTAGAAATTataggaaataattatattgagtCACAATTATCAATATCAACAAATAAGGATACAGCTTCTTCTCAACAACAAATGTCATCGCATATACTGTATGATTCTGaaggaatttttaaaatacctgCtgtaCCGCCTATTACAACAGAAGAAGAGAGTATTGGCCAAAGAACGCGCTCCAAGTTATCTTTAAGCGAAACTTCTTTGGAGGAAATAGAGCAAGCATTTATACCACCTGATATAACTGCTGATATGACTGATGATTGGGATTGTGAACTTGATGAAGATTgggataactttttaaaagaatttacgcAACCTTTGACGCAAGAACCAGCTGTAGAAGATGATCCAGACGCAGATCCAGAATACAATATCTTGGAAGATGAAACAGATTTATgGGACAAGGAAGAGCTTAGAACAGATAGAGCAGTAGAAGTTCCTCGTAAGGAGCAATATGATTTGATTGCAGAATTACTTGAATTAACTCCTATGTTCTCGACACAAGAACAAGAAatatcaagaaagaaaaaagttctAGATAATACGACACCACCAATTGAGAATGATGTTAtgAATTCCTCTGTAGTACATCTTTTACCAGTATTTGCAGAATCTGAATTGCCAAAATTGATGGACTATGAACGTCTTCTATTAGCAACACAATTCCAACAACATGTACAATTAATAGCACAGCATTTTGTTATGACTTACATGCATCCAGAATATCATTTATTGGCAAAAGTATGTAAACAGAACTTGAATAGTTTAAgATATTTGAGTAATGGACCGAAATctgcatttaatataaagaatttggAAGCAGCTTTAAAATTGGTATCAACTTGGGAAAACAAGTTTAATGACACCAAGTTTTATACAAActtcaaaaagaatataactaATGAAACTGCTAAAACTAAAATGTattgtgtaaataaatatagatatatcgaacaatttctccctgaattagagaaattatttgttgaaaGTAAGGCTCTTATGTATCCACATCTTCTACCGTCGATACCTTTCAGAAATGGAGTTAAATACAAGAAACCTGCATATTCAAAAGCGGAGGAAACTTTAATTGCACTGGGCATAGAGCAGTTTTTGCCATTTGTTTCTtctaaatcaaaaaaatttcatacaaaaaaaatgcaattgttCGATGCAGTTCAACTTATTAGCCATTATCTATTACCATGTAGAGATGCACAAGGAATATTgcatcatatttataaaagacgTTCTTCTAAAGATGAAAATCCAATCaagcattattttgaaaaaggtTGCGCtcctaaaataatacattatgtaACATCTGAATTTCCACTGAAAGCTCCAAAGGATCAACCAATAgaacttttatctttaaaatggCAAACATATCTTcaAAAAGagcataaaaatgatttggcaaaaagtagatatatatttgactCGTACAGTAATCTTTCTCTTGCTAAAGAAGGGATTAATATGAacgcaataataaaatcatatcctAGTATCCCTAATAACCATCTTTTACGAAATCCAGTTGTAAATATGTTACCAAAGATATTACCTGCAACTTTAAATCCCAAAGCTTTatctaaaatagataattctaCTAAAAAAGGTTGCAAATTCGATAGCGgcgaagataaaaaaatagttgataatagtatacaaaatatggaaacacataaaagaaaaacggCGGTACATAAAGGGCACACAAATTCTTGCTCCTCAAAAGTAGATACTTTAGATGTAGAGCCAATACAAACAGATAAatcattagataaaaataatataaaattaaatactgtaTTAACTAGAAGTTCAAAAATGTCCAAGGAGTCTCCACAAATATCACCAGAATTACCACAAATACGAAAGACCACTCCACGATTAGCAAAAACAAAAAGTGctcaaaatatgaaattgatgGCACAAGCTTTAGGTTCAAAAAACTCGTTCAATTGCAGTACCTTGAAATCTAAAGAAAAGGATGTcgcagataaaaatattgatgaacATTGTTCCACATCAAAAGTTgataatgaagaagaaatagCAGAATTAATGTTAGCTAgtagtacaataataaaagatccGGTAAGTAGGAAAAAAGCTAAACAAACTagagaattagaaattattaaaagattattaaaagctGAAAATCCATTGACCGAAGAAGAACATGAAGCAAAATTTGCAGCGTCATATCTTCAGAAATTACACTTGATATTAGAATCCAATGATCCAGAAACGTTTAAAGCtgtgataaagttatttttggaTTATAGTGAAAAACTAGACGGTATTAACCATACAGTTACTGACCCATCAATAACTGATAGATCTGAAAACTTTTCAACAAATAAACAGATAGAagataatgcaattaaaaaagatatattaacaatccaattatatcaagaaatttgtaaaaaattacaaaattatccaGAAGTATGCACGgactttgtattatttttaaaaccaCATCAAGCTGCAATAATTGGTAAATCTGCCGAATATATgatgttacaaaaaatgaaCGATTTTGTTCATGTTgctcaaatatattttgctaagCAACCATCACGGATAGCAAAGATGATGCAGGCAATTACACAACTTTCGTCTGATCCACACACAACTTTAGAAAATGTCTATGCCGTTATGAATACTGTTTTTAAAGGTCATCCACTCGTTATGGATTTGTTCTTACAAATTCTACCTACTGCAAAACCTCCCGAAagtttGTTTGCACCTCATATGTTCGAAAATATGACATGTCCATTAGGACCTTATGATAAAAACACAACTTACATGGAAAATGCATCAgagttatatgaaaatatagaattaccAACAGCGACATATCAGGAGGATCCATATGGTGGGGAGAATTGTAAATGTGATTGTCATAATATTGATGAAGCAAgttcgaaaaataattctgaacaTTGTGTTTCCTGTGGTATACGATTTCTTAATGGAAGAATTTATCTTCAAACACCTGAAGGATTACGACCtgcaaaaattacatttgccGGAGAGGATCAggagaaattagaaaatattgcacgaatatcattaaaaattgctgaTAAAACCATTCCTCAATCAATTTCTTCTAAAAAACGACGGAAATCATCAAAGAATAATTCTAATCACGAGGATCTTTGTAAAAAACAGTGCGCTACAAAATATTCGCcaataaaagataatgaaGATAATGAAAAGGCAATAACAAAGTCAAAaagaaatgtcaaatttacGCTCAAAACagatcaaagaaaaattttaaaaagaataggaaCTGTAGATCATGCAATTGTAGATAAAAGAATGCGTATATCTCAGTGCAAGaataaacgagaaaaaaagattgaagaaAGTGTTTCATTAGAGCAAAATGAACTTGATGTTATAAGGCATGAAAAAACAAGTGAATTTACAGAAACTGAAAATAGTTGTACGCAATTATCAATGTCAGATAATTTGTCAAGTACTGAAGTAATTACAAAAAcacaaatttcttcaaatataaGCAATAATATTGGTTTTAATTCAAataaaaatatagaaacagtGCTTATAACAGCAACGGAAAATAATATGTCATCGAAATCCGATTTAACTAATGATAAACCATGGACACGTCAGGAAGATATGATTTTGctacaaaatatcaaaaaggaatattctgaaaattcATTCCTACTGATTagtgaaaaattagaaaatcgtACCGTTGATCAAGTGAAAGAGAGATGCCAAACTTTGCTTTCTTTACTTCAGAAAAtgatgtaa
- Protein Sequence
- MEESTNKLVQNDSDILTSSVSFTESPKKCNLSFSINFDFNDVNSENSTDSENADLQIDISEVDNYEPSSKHKREAVEEASVLNEMEEEIERQLDAKAAKTNLTATNVKNILKHVIPYEHLMTMVQKWLQDTENDINIGPKLTRAKAKKLAAAKVDILWPITTAQKTSSEVQALIQEELPEDSSDEEYNPEHDKQSDDDREVEIIGNNYIESQLSISTNKDTASSQQQMSSHILYDSEGIFKIPAVPPITTEEESIGQRTRSKLSLSETSLEEIEQAFIPPDITADMTDDWDCELDEDWDNFLKEFTQPLTQEPAVEDDPDADPEYNILEDETDLWDKEELRTDRAVEVPRKEQYDLIAELLELTPMFSTQEQEISRKKKVLDNTTPPIENDVMNSSVVHLLPVFAESELPKLMDYERLLLATQFQQHVQLIAQHFVMTYMHPEYHLLAKVCKQNLNSLRYLSNGPKSAFNIKNLEAALKLVSTWENKFNDTKFYTNFKKNITNETAKTKMYCVNKYRYIEQFLPELEKLFVESKALMYPHLLPSIPFRNGVKYKKPAYSKAEETLIALGIEQFLPFVSSKSKKFHTKKMQLFDAVQLISHYLLPCRDAQGILHHIYKRRSSKDENPIKHYFEKGCAPKIIHYVTSEFPLKAPKDQPIELLSLKWQTYLQKEHKNDLAKSRYIFDSYSNLSLAKEGINMNAIIKSYPSIPNNHLLRNPVVNMLPKILPATLNPKALSKIDNSTKKGCKFDSGEDKKIVDNSIQNMETHKRKTAVHKGHTNSCSSKVDTLDVEPIQTDKSLDKNNIKLNTVLTRSSKMSKESPQISPELPQIRKTTPRLAKTKSAQNMKLMAQALGSKNSFNCSTLKSKEKDVADKNIDEHCSTSKVDNEEEIAELMLASSTIIKDPVSRKKAKQTRELEIIKRLLKAENPLTEEEHEAKFAASYLQKLHLILESNDPETFKAVIKLFLDYSEKLDGINHTVTDPSITDRSENFSTNKQIEDNAIKKDILTIQLYQEICKKLQNYPEVCTDFVLFLKPHQAAIIGKSAEYMMLQKMNDFVHVAQIYFAKQPSRIAKMMQAITQLSSDPHTTLENVYAVMNTVFKGHPLVMDLFLQILPTAKPPESLFAPHMFENMTCPLGPYDKNTTYMENASELYENIELPTATYQEDPYGGENCKCDCHNIDEASSKNNSEHCVSCGIRFLNGRIYLQTPEGLRPAKITFAGEDQEKLENIARISLKIADKTIPQSISSKKRRKSSKNNSNHEDLCKKQCATKYSPIKDNEDNEKAITKSKRNVKFTLKTDQRKILKRIGTVDHAIVDKRMRISQCKNKREKKIEESVSLEQNELDVIRHEKTSEFTETENSCTQLSMSDNLSSTEVITKTQISSNISNNIGFNSNKNIETVLITATENNMSSKSDLTNDKPWTRQEDMILLQNIKKEYSENSFLLISEKLENRTVDQVKERCQTLLSLLQKMM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00014660;
- 90% Identity
- iTF_00181246;
- 80% Identity
- -