Basic Information

Gene Symbol
-
Assembly
GCA_000143395.2
Location
NW:520713-526952[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.7 2.5e+03 -2.1 0.0 21 31 1068 1078 1058 1082 0.81
2 2 2.9e-09 1.9e-06 27.1 0.1 2 46 1422 1468 1421 1468 0.93

Sequence Information

Coding Sequence
atggaGGAATCAACAAATAAGCTTGTGCAAAATGACTCTGACATATTAACATCCTCGGTTTCCTTTACCGAATCACCCAAGAAATGCAACCTCTCTTTTTCAATTAACTTTGACTTTAACGACGTTAATAGTGAAAACTCAACTGATTCCGAAAATGCAGACTTACAAATCGACATATCCGAAGTGGATAATTATGAACCGTCTAGTAAACATAAGAGAGAAGCTGTTGAAGAAGCATCGGTACTTAATGAAATGGAAGAAGAGATTGAGAGACAACTTGATGCTAAAGCTGCCAAAACTAATTTAACTGCCACTAATGtcaaaaacattttgaaacacGTAATCCCCTATGAACATTTAATGACAATGGTACAAAAATGGCTTCAAGATactgaaaatgatattaatattggtCCTAAACTCACACGAGCTAAAGCTAAaaaattagcAGCTGCCAAAGTCGATATACTATGGCCTATCACTACAGCACAAAAAACTTCCTCTGAAGTACAAGCTTTAATTCAGGAGGAGCTACCAGAAGATTCATCTGATGAAGAATATAATCCTGAACATGATAAACAGAGTGACGATGATAGAGAAGTAGAAATTataggaaataattatattgagtcacaattatcaatattaacaaaCAATAAGGATACAGCTTCTTCTCAACAACAAATGTCATCGCATATACTGTATGATTCTGaaggaatttttaaaatacctgCtgtaCCGCCTATTACAACAGAAGAAGAGAGTATTGGCCAAAGAACACGCTCCAAGTTATCTTTAAGTGAAACTTCTTTGGAGGAAATAGAGCAAGCATTTATACCACCTGATATAACTGCTGATATGACTGATGATTGGGATTGTGAACTTGATGAAGATTGggataactttttaaaagaatttacgcAACCTTTGACGCAAGAACCAGCTGTAGAAGATGATCCAGACGCAGATCCAGAATACAATATCTTGGAAGATGAAACAGATTTATgGGACAAGGAAGAGCTTAGAACAGATAGAGCAGTAGAAGTTCCTCGTAAGGAGCAATATGATTTGATTGCAGAATTACTTGAATTAACTCCTATGTTCTCGACACAAGAACAAGAAGtatcaagaaagaaaaaagttctAGATAATACGACACCACCAATTGAGAATGATGTTAtgAATTCCTCTGTAGTACATCTTTTACCAGTATTTGCAGAATCTGAATTGCCAAAATTGATGGACTATGAACGTCTTCTATTAGCAACACAATTCCAACAACACGTACAATTAATAGCACAGCATTTTGTTATGACTTACATGCATCCAGAATATCATTTATTGGCAAAAGTATGTAAACAGAACTTGAATAGTTTAAgATATTTGAGTAATGGACCGAAATctgcatttaatataaagaatttggAAGCAGCTTTAAAATTGGTATCAACTTGGGAAAACAAGTTTAATGACACCAAGTTTTATACAAActtcaaaaagaatataactaATGAAACTGCTAAAACTAAAATGTattgtgtaaataaatatagatatatcgaacaatttctccctgaattagagaaattatttattgaaagtaAGGCTCTTATGTATCCACATCTTCTACCGTCGATACCTTTCAGAAATGGAGTTAAATACAAGAAACCTGCATATTCAAAAGCGGAGGAAACTTTAATTGCACTGGGCATAGAGCAGTTTTTGCCATTTGTTTCTtctaaatcaaaaaaatttcatacaaaaaaaatgcagtTGTTCGATGCAGTTCAACTTATTAGCCATTATCTATTACCATGTAGAGATGCACAAGGAATATTgcatcatatttataaaagacgTTCTTCTAAAGATGAAAATCCAATCaagcattattttgaaaaaggtTGCGCtcctaaaataatacattatgtaaCATCTGAATTTCCACTAAAAGCTCCAAAGGATCAACCAATAgaacttttatctttaaaatggCAAACATATCTTcaAAAAGagcataaaaatgatttggcaaaaagtagatatatatttgactCGTACAGTAATCTTTCTCTTGCTAAAGAAGGGATTAATATGAacgcaataataaaatcatatcctAGTATCCCTAATAACCATCTTTTACGAAATCCAGTTGTAAATATGTTACCAAAGATATTACCTGCAACTTTAAATCCCAAAGCTTTatctaaaatagataattctaCTAAAAAAGGTTGCAAATTCGATAGCggcgaagataaaaaaataattgataatagtatacaaaatatggaaacacataaaagaaaaacggCGGTACATAAAGGGCACACAAATTCTTGCTCCTCAAAAGTAGATACTTTAGATGTAGAGCCAATACAAACAGATAAatcattagataaaaataatataaaattaaatactgtaTTAACTAGAAGTTCAAAAATGTCCAAGGAGTCTCCACAAATATCACCAGAATTACCACAAATACGAAAGACCACTCCACGATTAGCAAAAACAAAAAGTGctcaaaatatgaaattgatgGCACAAGCTTTAGGTTCAAAAAACTCGTTCAATTGCAGTACCTTGAAATCTAAAGAAAAGGATGCcgcagataaaaatattgatgaacATTGTTCCACATCAAAAGTTgataATGAAGAAGAAATAGCAGAATTAATGTTAGCTAgtagtacaataataaaagatccGGTAAGTAGGAAAAAAGCTAAACAAACTagagaattagaaattattaaaagattattaaaagctGAAAATCCATTGACCGAAGAAGAACATGAAGCAAAATTTGCAGCGTCATATCTTCAGAAATTACACTTGATATTAGAATCCAATGATCCAGAAACGTTTAAAGCtgtgataaagttatttttggaTTATAGTGAAAAACTAGACGGTATTAACCATACAGTTACTGACCCATCAATAACTGATAGATCTGAagatttttcaacaaataaaCAGATAGAagataatgcaattaaaaaagatatattaacaatccaattatatcaagaaatttgtaaaaaattacaaaattatccaGAAGTATGCACAgactttgtattatttttaaaaccaCATCAAGCTGCAATAATTGGTAAATCTGCCGAATATATgatgttacaaaaaatgaaCGATTTTGTTCATGTTgctcaaatatattttgctaagCAACCATCACGGATAGCAAAGATGATGCAGGCAATTACACAACTTTCGTCTGATCCACACACAACTTTAGAAAATGTCTATGCCGTTATGAATACTGTTTTTAAAGGTCATCCACTCGTTATGGATTTGTTCTTACAAATTCTACCTACTGCAAAACCTCCCGAAagtttGTTTGCACCTCATATGTTTGAAAATATGACATGTCCATTAGGACCTTATGATAAAAACACAACTTACATGGAAAATGCATCAgagttatatgaaaatatagaattaccAACAGCGACATATCAGGAGGATCCATATGGTGGGGAGAATTGTAAATGTGATTGTCATAATATTGATGAAGCAAgttcgaaaaataattctgaacaTTGTGTTTCCTGTGGTATACGATTTCTTAATGGAAGAATTTATCTTCAAACACCTGAAGGATTACGACctgcaaaaattacatttgccGGAGAGGATCAggagaaattagaaaatattgcacgaatatcattaaaaattgctgaTAAAACCATTCCTCAATCAATTTCTTCTAAAAAACGACGGAAATCATCAAAGAATAATTCTAATCACGAGGATCTTTGTAAAAAACAGTGCGCTACAAAATATTCGCcaataaaagataatgaaGATAATGAAAAGGCAATAACAAAGTCAAAaagaaatgtcaaatttacGCTCAAAACagatcaaagaaaaattttaaaaagaataggaaCTGTAGATCATGCAATTGTAGATAAAAGAATGCGTATATCTCAGTGCAAGaataaacgagaaaaaaagattgaagaaaGTGTTTCATTAGAGCAAAATGAACTTGATGTTATAAGGCATGAAAAAACAAGTGAATTTACAGAAACTGAAAATAGTTGTACGCAATTATCAATGTCAGATAATTTGTCAAGTACTGAAGTAATTACAAAAACacaaatttcttcaaatataaGCAATAATATTGGTTTTAATTCAAataaaaatatagaaacagTGCTTATAACAGCAACGGAAAATAATATGTCATCGAAATCCGATTTAACTAATGATAAACCATGGACACGTCAGGAAGATATGATTTTGctacaaaatatcaaaaaggaatattctgaaaattcATTCCTACTGATTagtgaaaaattagaaaatcgtACCGTTGATCaaGTGAAAGAGAGATGCCAAACTTTGCTTTCTTTACTTCAGAAAAtgatgtaa
Protein Sequence
MEESTNKLVQNDSDILTSSVSFTESPKKCNLSFSINFDFNDVNSENSTDSENADLQIDISEVDNYEPSSKHKREAVEEASVLNEMEEEIERQLDAKAAKTNLTATNVKNILKHVIPYEHLMTMVQKWLQDTENDINIGPKLTRAKAKKLAAAKVDILWPITTAQKTSSEVQALIQEELPEDSSDEEYNPEHDKQSDDDREVEIIGNNYIESQLSILTNNKDTASSQQQMSSHILYDSEGIFKIPAVPPITTEEESIGQRTRSKLSLSETSLEEIEQAFIPPDITADMTDDWDCELDEDWDNFLKEFTQPLTQEPAVEDDPDADPEYNILEDETDLWDKEELRTDRAVEVPRKEQYDLIAELLELTPMFSTQEQEVSRKKKVLDNTTPPIENDVMNSSVVHLLPVFAESELPKLMDYERLLLATQFQQHVQLIAQHFVMTYMHPEYHLLAKVCKQNLNSLRYLSNGPKSAFNIKNLEAALKLVSTWENKFNDTKFYTNFKKNITNETAKTKMYCVNKYRYIEQFLPELEKLFIESKALMYPHLLPSIPFRNGVKYKKPAYSKAEETLIALGIEQFLPFVSSKSKKFHTKKMQLFDAVQLISHYLLPCRDAQGILHHIYKRRSSKDENPIKHYFEKGCAPKIIHYVTSEFPLKAPKDQPIELLSLKWQTYLQKEHKNDLAKSRYIFDSYSNLSLAKEGINMNAIIKSYPSIPNNHLLRNPVVNMLPKILPATLNPKALSKIDNSTKKGCKFDSGEDKKIIDNSIQNMETHKRKTAVHKGHTNSCSSKVDTLDVEPIQTDKSLDKNNIKLNTVLTRSSKMSKESPQISPELPQIRKTTPRLAKTKSAQNMKLMAQALGSKNSFNCSTLKSKEKDAADKNIDEHCSTSKVDNEEEIAELMLASSTIIKDPVSRKKAKQTRELEIIKRLLKAENPLTEEEHEAKFAASYLQKLHLILESNDPETFKAVIKLFLDYSEKLDGINHTVTDPSITDRSEDFSTNKQIEDNAIKKDILTIQLYQEICKKLQNYPEVCTDFVLFLKPHQAAIIGKSAEYMMLQKMNDFVHVAQIYFAKQPSRIAKMMQAITQLSSDPHTTLENVYAVMNTVFKGHPLVMDLFLQILPTAKPPESLFAPHMFENMTCPLGPYDKNTTYMENASELYENIELPTATYQEDPYGGENCKCDCHNIDEASSKNNSEHCVSCGIRFLNGRIYLQTPEGLRPAKITFAGEDQEKLENIARISLKIADKTIPQSISSKKRRKSSKNNSNHEDLCKKQCATKYSPIKDNEDNEKAITKSKRNVKFTLKTDQRKILKRIGTVDHAIVDKRMRISQCKNKREKKIEESVSLEQNELDVIRHEKTSEFTETENSCTQLSMSDNLSSTEVITKTQISSNISNNIGFNSNKNIETVLITATENNMSSKSDLTNDKPWTRQEDMILLQNIKKEYSENSFLLISEKLENRTVDQVKERCQTLLSLLQKMM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00014660;
80% Identity
-