Basic Information

Insect: Atta cephalotes
Gene Symbol: RREB1
Assembly: GCA_000143395.2
Location: NW:731880-738933[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.9e-05 0.0023 17.5 1.2 1 23 71 93 71 93 0.97

2 14 6.5e-05 0.0037 16.8 0.1 1 23 107 129 107 129 0.98

3 14 9.6e-05 0.0056 16.3 5.5 1 21 135 155 135 158 0.95

4 14 1 59 3.6 0.1 3 23 255 276 253 276 0.95

5 14 0.0043 0.25 11.1 3.7 2 23 282 304 282 304 0.96

6 14 0.13 7.6 6.4 0.2 1 23 531 553 531 553 0.96

7 14 1.5e-05 0.00084 18.9 0.2 1 23 562 584 562 584 0.98

8 14 0.0031 0.18 11.5 3.1 1 23 590 613 590 613 0.96

9 14 0.00035 0.02 14.5 3.1 1 23 982 1005 982 1005 0.97

10 14 0.00017 0.0098 15.5 0.2 2 23 1271 1292 1270 1292 0.97

11 14 0.032 1.9 8.3 3.2 1 23 1365 1389 1365 1389 0.96

12 14 4.9 2.8e+02 1.5 1.6 1 23 1469 1492 1469 1492 0.90

13 14 0.0023 0.13 12.0 0.5 3 23 1546 1566 1544 1566 0.96

14 14 0.002 0.11 12.2 5.2 1 23 1572 1594 1572 1594 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.9e-05	0.0023	17.5	1.2	1	23	71	93	71	93	0.97
2	14	6.5e-05	0.0037	16.8	0.1	1	23	107	129	107	129	0.98
3	14	9.6e-05	0.0056	16.3	5.5	1	21	135	155	135	158	0.95
4	14	1	59	3.6	0.1	3	23	255	276	253	276	0.95
5	14	0.0043	0.25	11.1	3.7	2	23	282	304	282	304	0.96
6	14	0.13	7.6	6.4	0.2	1	23	531	553	531	553	0.96
7	14	1.5e-05	0.00084	18.9	0.2	1	23	562	584	562	584	0.98
8	14	0.0031	0.18	11.5	3.1	1	23	590	613	590	613	0.96
9	14	0.00035	0.02	14.5	3.1	1	23	982	1005	982	1005	0.97
10	14	0.00017	0.0098	15.5	0.2	2	23	1271	1292	1270	1292	0.97
11	14	0.032	1.9	8.3	3.2	1	23	1365	1389	1365	1389	0.96
12	14	4.9	2.8e+02	1.5	1.6	1	23	1469	1492	1469	1492	0.90
13	14	0.0023	0.13	12.0	0.5	3	23	1546	1566	1544	1566	0.96
14	14	0.002	0.11	12.2	5.2	1	23	1572	1594	1572	1594	0.98

Sequence Information

Coding Sequence: ATGAGGAGACCGTCGAATGCGGTTAGAACGTCGGACGAGAACGTTGATAAGTATTATTGTCTCGGCTCCATCTGCGGTTCGGTCTGGGTATCAGCTTCCGGAATACTTATGACTGGACCCGAGAATGGATCCAGCCAGGAACAGGAAAACGAAACGCAAATTGATGCTGCATCACCATCATcaagtGTTGAGCTATCGGAGAATGGCGCGCATCCATGCCCGACGTGCCCGTCGGTATTTTCCAGTTCCCACGAACTGACGAATCATCTGCGTGGCCACAATTCCCCTCGCAGCACAGACTGCAGCGGCGAAGAGGACTATAGTTGTAGCGTATGTAATAAGGTACTTAGTTCGGCGAGTTCGCTGGACCGGCATGTGCTGGTGCACTCAGGCGAACGACCGTTCAAGTGCAAACATTGCGATATGTCGTTCACGACGAATGGCAACATGAACCGACACGTGAGATGTACACATCGGATGGTGTCGCCGAACAGTTGCACGGACTCTGAAGGTAGCAGCAGTTCGGAAAGACCGGCGGGGACAAGTCAAGACGAGTACAACAACAATGAGATAACTAGGCACAATTCACCGGACTTGATCGACGATCGACAACCGTCGCCCAGCAACAACCGCGGAAACAAGCGGAAATGCGCAGACGAAGACATCAGTGACATGGAGGATCAGAGGAGGCATAAGATCCTCTTGAACAACACCAAGATGTCGATCAGGTGTAGGCCAGAGGATGAGCAAAAAACTTTTGGTTGTTTGCTCTGCAGTCAGGATTTCGCAAGCAGTGCGATTTTGGAGTCTCATATGGAGCGCGTGCATCCGGGTTCTCCAGCTACATGCGAGACCTGCAACCAGTCGTTCAAGAATCATCGTGCGTTAAACCTTCATCGTTCAATGAGACACTACAAGAAGAACTCGGAAGGCAACAACAGCCGTAGTCTGCGTAACACTGTGGACGGTTTCAGGGATCTGACGTTCATTGATTTTTCGTCCATCAAATTTCCAACGATCGCTCGGGCGATGTGCGAGCGTGAACTGCATCGACCGGCCTCTGGCGAGGCCAATAGGTTCCAGTGTATGAAGTGCTTGCACGCGTTTCCCTGCAGACAGGCCCAATTAGCCCATGAAAAAGAATGCAAGGGTCCCTACAAGAACAAAAGAAACAGCAAcgataacaacaataataatgatattagtaCTAACAACAATCTCGAGACAGAACTGGACGATCCGAGCCCGCAGCCCGATGATCCTAAGACAAAGCGCGAGATATTTTTCGCTGTGTTGGATCTACAGAATAAGTCTTTGGTGCACGAGACGAAGGAGCCACGAGAACCAAGCGAAATCAGGGAATCGAAAGAGACTAAGGATTTAGCGGATATCCCGAGCATCTTATCTGTTAGTCTGAATGGATTGCAGACCTTTCCTCGATCGGATGCGAGCACGCCCGAAAATAACATCAAATTCAATCCAAATATTGGCTCTTCAGGTTCCTCAGGCACCTGTTCGTCCGAATACAATGAAGAAGAAGCGCAGGATGCCTTCACCGCGGAATTCCGGAAGATGAAACTGAAGGGCGAGTTCCCATGTAGACTATGCACATCTGTATTTCCCAATTTGCGAGCATTGAAGGGACACAATCGTGCGCATATGAACGTGGAACCAGGTATGTCATATCCGTGCAATATGTGTCCTTATAGCAGTACTGACAAAGGAGCTCTGATGAAGCATCTGAGATCGCATAACGGTGACAGGCCATTTGAATGCTCTCTCTGCAATTATGCATTCACCACCAAAGCAAATTGCGAGAGGCACGTGAAGAATCGTCACGGGATGATTAGCAAAGAAGACGTTAAGAATGCATTAATCTATCATCCGAATGAAGATTCGACAAACGATAACATCGAAAGAAGCTCGCCCAGAGTCATCAGAGAAGATGTGCGGAAGACACTTATTTATCCGAATGAACGCGAAGAAACTCCTCAACAACAAATACACTATCCGTCTATAGCAATGGATTGTAATCCTGGACCATCGAATATTTGCCCCGAGATATTGATGAATCGCTATGATAAGTCGGACGCGTTCACCAGAGTGAAGATGCAGGCTCTTAATCTTGTCAAAAGAAACGCCGACGAAGCAAACGTATCTCACGATTTGCTCGTGAAATCTAATTATTCGAAGATCGATGACGATGTCGAGTCGGGATCGTCGGACGGCAGCGTGTCTCTAGTCAGTGATACCAAAACGGATACACACCAAAGAATTCAAGCTAGTCCGATGAACCTGACGAAGCCCTCGACAAGCTCTGGGTTGAGCTCGGGGGAGGACGGTCCGTTGGATCTGTCCATGGATGTGTTGGATCTGAGCAGaaagcgaaagagagaaaatgagGATTGCGGTTCACAGGAGGAGAAGCGGTTTAAGAGCAATCAACAGGAATTGTACGCCACGAATCCAGCATTGCTGTTAACTCAAGCTTTGCTGAACAGAGCACGTGAGAGCTCACCGACGACGTCACTGGAGACTCTTTATGCGAATACTATTTATCGCAATTTCGGTACGTTAACCAGTGCCGGCATGATACCGCCATACTTCCTCAGTCCTCACATGTTCGGCCAGGAATTAACGAAGGGCAGACTACAGAAGGAACTGGTTAGAGGTTTGCAGCTCACTGGTGGCGGTACACTTTCAGTGGATCCGTCACTACCCAGCACCAGTTACGCAGCGTATCCGCAAACAAGGGACACTCCGCAATCCTCGAGTGAGCAAAATGCTTATGCAAACTTGATGAATACGCAGATTACTAATCAGACCGCGCCGAGCCGTGAAAAAACAGATGTTATCCCATCGAATGATCCTGTAAAGATGGTACTCAAGAACGGAGTATTAATCCCCAAGCAAAAGCAACGTAGATATCGTACCGAGAGACCTTTTACTTGTGAGCATTGCACGGCGAGATTCACGCTTAGGAGTAATATGGAACGACATATCAAGCAACAGCATCCACAATATTGGAGCCAAAGACCTCGCGGTGGACATTCGACTAGAGGTCGACCGCCCGCAAGTCATCCAAGTATGGTACAGACTACTAGTCCATCGTCCTCGCAAATAGTTCAACCATATTCGAGCATTCTTCCGAACGTCGACACGCCGGGGATCACATCGGACTACGGCACACACCCTATCTCGGACCAAGTAAAATACGCGATTTTAGCGCAACAACTGAAGGCCAATAAAATAGATGACAATGATTCAGACAACGAAATGGTGATAGACGAGGAGCCGGTTGATCGGGACGTTCAGGAATCGCAAGTTCAACGCGAGTCTAGTATGAGTTTGTTGAGAGATCAGTTGGAAAACAGCGATGGTGTTAAAGATATTCTCGTAAAAACAGAAGCGGCCGAGTCCGCGGAGGAAATCTCGGAAGAAACCCACGGTGAACAGATCACACGGAATAACATCGACGCCGATCTGGAAGAATCCGCAGCTGAAAGCAAATCAATACGCGCTGAAGAAATGATACAATCCACTGAAAAGGAACAAGGCAAACTTGAAGACGGAGCGCCCGATCTCGCTAGTGTCTCAAAGCTTTTAGACAATGCGTCTCAGCAATATCAACAATTTCAACCGCAATATTTGAGTGACGAGGAGGGCCCCGTTGCATCGACCAGTGGTAATAACTCCGGCAGCGAGAAGTCTGATTCTATGAATTCCTTGAACTCCGGAAATGATTCCTCGCCaaataagaagaagaaaaagaagaagaagtccGCATACTCAATGGCACCAAACCGCGTTTCATGTCCGTATTGTGACCGTCAATTTCCATGGACTTCGTCGCTGAGACGACACATTCTCACCCACACCGGCCAGAAGCCGTATCAGTGCATTCACTGTTCGCATCATTTCACTACCAAGTCCAACTGCGACCGCCATTTGTTGAGAAAGCACAAGGCGAAAGCGAACAAAATGCGCCGTGTCAGGAATTCATCCTCGCCGGACGTCCAAGTGGTCGCTAGCAGCAGCAGTAGCAGCAACGGCAGCAACACGTTCTCCATGAGAAATGTGCCCGAGAGGCCGTTCAAATGTCATCAGTGTCCAAGCTCGACGTTCGCCACGTTGGGCAATCTGAAGAAGCACCGGTCGAGTAAGCACCGCAAGAATGCGTCTAGATCGGAATCTAGTGATCAACAAAACAGTCCGCCTCAATGCCCCGCGCAAAATGATCAGAGCGATTACGAGAGCCGTTCATCGAGCATGTCCGACAACATGGAGAACACATCGTCTGCCGTCGCAGTCGCGAAACCGACTTCCACCGCGTCACCCTCGATAAATGACGCCACCAGATCGCGCAAATCACCAAGATTATCACCGAGTCCCGGTGATGTACCCTTCAAATGTTATCTGTGCGACAGCGGTTTCTCGGAACGACAGGACTGCCTGGACCACATCAAAGCCAGTCATAGTCGTTCATACGATATGTTGAAGGCCAAAGGGGCTCTCGACATGGCATCCATGAATATAGATGCAAACGAAGATCAGATGTTAGCATCGCACCAACATCTCAGTGatggagaagaaaagaaaggcCGTTTTCCTGATTACAGCAACAGAAAGGTTATGTGCGCTTTCTGCTTGAGACGATTTTGGTCCGCGGAAGATCTCCGGCGTCACATGAGGACCCACACGGGAGAGAGGCCCTTCGAATGCGACATATGCACCAGGAAATTCACGCTCAAACACAGCATGCTACGCCACCGTAAGAAACATGAGTCAGTGGATTCCGCCATGTATATAGCTAACAGCGGCGACGAGGACAATTCGCCTGCGCAACCACCAACGATAACACCTAGGAGTCAACAGCACTCGCCAATCTCCACTAACACCAGCAGGCCCCGCACACAGGATAGAATCTCTTTGCCAACCGTCGCGGCGGTAGCAACGGCGGATGCGGCACCCTGTGCCCTGATGCGATACAATCACTATGATAACATGGCCACTCTCACCGGTAGAATGGCGAACGACGGTCCCCAAGGTGCCGCATCCGCTCCGCTGTCTTCTCCGCCGCCTCCCGCGGAGGTACCCAGTGAGAGCGGAGACAACGACCTGATCTCTAATTTGCTGGGTATACGCGAGAAAGGTTTGCTCGACAAGGTTCTTCTAAGCTCGGCGGACGACGCGGCGAAGTTGTTGGGGGTGAACCATAATGAGTAA
Protein Sequence: MRRPSNAVRTSDENVDKYYCLGSICGSVWVSASGILMTGPENGSSQEQENETQIDAASPSSSVELSENGAHPCPTCPSVFSSSHELTNHLRGHNSPRSTDCSGEEDYSCSVCNKVLSSASSLDRHVLVHSGERPFKCKHCDMSFTTNGNMNRHVRCTHRMVSPNSCTDSEGSSSSERPAGTSQDEYNNNEITRHNSPDLIDDRQPSPSNNRGNKRKCADEDISDMEDQRRHKILLNNTKMSIRCRPEDEQKTFGCLLCSQDFASSAILESHMERVHPGSPATCETCNQSFKNHRALNLHRSMRHYKKNSEGNNSRSLRNTVDGFRDLTFIDFSSIKFPTIARAMCERELHRPASGEANRFQCMKCLHAFPCRQAQLAHEKECKGPYKNKRNSNDNNNNNDISTNNNLETELDDPSPQPDDPKTKREIFFAVLDLQNKSLVHETKEPREPSEIRESKETKDLADIPSILSVSLNGLQTFPRSDASTPENNIKFNPNIGSSGSSGTCSSEYNEEEAQDAFTAEFRKMKLKGEFPCRLCTSVFPNLRALKGHNRAHMNVEPGMSYPCNMCPYSSTDKGALMKHLRSHNGDRPFECSLCNYAFTTKANCERHVKNRHGMISKEDVKNALIYHPNEDSTNDNIERSSPRVIREDVRKTLIYPNEREETPQQQIHYPSIAMDCNPGPSNICPEILMNRYDKSDAFTRVKMQALNLVKRNADEANVSHDLLVKSNYSKIDDDVESGSSDGSVSLVSDTKTDTHQRIQASPMNLTKPSTSSGLSSGEDGPLDLSMDVLDLSRKRKRENEDCGSQEEKRFKSNQQELYATNPALLLTQALLNRARESSPTTSLETLYANTIYRNFGTLTSAGMIPPYFLSPHMFGQELTKGRLQKELVRGLQLTGGGTLSVDPSLPSTSYAAYPQTRDTPQSSSEQNAYANLMNTQITNQTAPSREKTDVIPSNDPVKMVLKNGVLIPKQKQRRYRTERPFTCEHCTARFTLRSNMERHIKQQHPQYWSQRPRGGHSTRGRPPASHPSMVQTTSPSSSQIVQPYSSILPNVDTPGITSDYGTHPISDQVKYAILAQQLKANKIDDNDSDNEMVIDEEPVDRDVQESQVQRESSMSLLRDQLENSDGVKDILVKTEAAESAEEISEETHGEQITRNNIDADLEESAAESKSIRAEEMIQSTEKEQGKLEDGAPDLASVSKLLDNASQQYQQFQPQYLSDEEGPVASTSGNNSGSEKSDSMNSLNSGNDSSPNKKKKKKKKSAYSMAPNRVSCPYCDRQFPWTSSLRRHILTHTGQKPYQCIHCSHHFTTKSNCDRHLLRKHKAKANKMRRVRNSSSPDVQVVASSSSSSNGSNTFSMRNVPERPFKCHQCPSSTFATLGNLKKHRSSKHRKNASRSESSDQQNSPPQCPAQNDQSDYESRSSSMSDNMENTSSAVAVAKPTSTASPSINDATRSRKSPRLSPSPGDVPFKCYLCDSGFSERQDCLDHIKASHSRSYDMLKAKGALDMASMNIDANEDQMLASHQHLSDGEEKKGRFPDYSNRKVMCAFCLRRFWSAEDLRRHMRTHTGERPFECDICTRKFTLKHSMLRHRKKHESVDSAMYIANSGDEDNSPAQPPTITPRSQQHSPISTNTSRPRTQDRISLPTVAAVATADAAPCALMRYNHYDNMATLTGRMANDGPQGAASAPLSSPPPPAEVPSESGDNDLISNLLGIREKGLLDKVLLSSADDAAKLLGVNHNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01016049;
90% Identity: iTF_01355659;
80% Identity: -