Basic Information

Insect: Atta cephalotes
Gene Symbol: -
Assembly: GCA_000143395.2
Location: NW:7035162-7044179[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.24 14 5.6 7.5 2 23 279 301 278 301 0.97

2 18 0.029 1.7 8.5 2.2 1 23 350 372 350 372 0.97

3 18 0.87 50 3.9 1.1 1 23 421 443 421 443 0.97

4 18 0.025 1.4 8.7 0.1 1 20 491 510 491 512 0.92

5 18 0.00086 0.05 13.3 1.8 1 23 552 574 552 574 0.98

6 18 2.8e-05 0.0016 18.0 0.1 1 23 621 643 621 643 0.96

7 18 0.0027 0.16 11.7 0.1 1 23 649 671 649 671 0.97

8 18 1.5e-05 0.00087 18.8 0.2 1 23 714 737 714 737 0.96

9 18 0.0022 0.13 12.0 0.6 1 23 743 766 743 766 0.96

10 18 3.1e-05 0.0018 17.8 2.5 2 23 774 796 773 796 0.97

11 18 0.00011 0.0066 16.1 0.0 1 23 804 826 804 826 0.93

12 18 0.11 6.4 6.7 0.1 1 20 886 905 886 905 0.96

13 18 0.11 6.6 6.6 0.4 2 23 925 946 924 946 0.96

14 18 1.4e-06 8e-05 22.1 1.0 1 23 959 981 959 981 0.98

15 18 9.1e-05 0.0052 16.4 3.1 1 23 1003 1026 1003 1026 0.94

16 18 0.0016 0.091 12.5 1.3 2 23 1085 1107 1084 1107 0.95

17 18 0.00037 0.022 14.4 1.6 1 23 1125 1148 1125 1148 0.93

18 18 0.0037 0.21 11.3 0.3 2 23 1241 1263 1241 1263 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.24	14	5.6	7.5	2	23	279	301	278	301	0.97
2	18	0.029	1.7	8.5	2.2	1	23	350	372	350	372	0.97
3	18	0.87	50	3.9	1.1	1	23	421	443	421	443	0.97
4	18	0.025	1.4	8.7	0.1	1	20	491	510	491	512	0.92
5	18	0.00086	0.05	13.3	1.8	1	23	552	574	552	574	0.98
6	18	2.8e-05	0.0016	18.0	0.1	1	23	621	643	621	643	0.96
7	18	0.0027	0.16	11.7	0.1	1	23	649	671	649	671	0.97
8	18	1.5e-05	0.00087	18.8	0.2	1	23	714	737	714	737	0.96
9	18	0.0022	0.13	12.0	0.6	1	23	743	766	743	766	0.96
10	18	3.1e-05	0.0018	17.8	2.5	2	23	774	796	773	796	0.97
11	18	0.00011	0.0066	16.1	0.0	1	23	804	826	804	826	0.93
12	18	0.11	6.4	6.7	0.1	1	20	886	905	886	905	0.96
13	18	0.11	6.6	6.6	0.4	2	23	925	946	924	946	0.96
14	18	1.4e-06	8e-05	22.1	1.0	1	23	959	981	959	981	0.98
15	18	9.1e-05	0.0052	16.4	3.1	1	23	1003	1026	1003	1026	0.94
16	18	0.0016	0.091	12.5	1.3	2	23	1085	1107	1084	1107	0.95
17	18	0.00037	0.022	14.4	1.6	1	23	1125	1148	1125	1148	0.93
18	18	0.0037	0.21	11.3	0.3	2	23	1241	1263	1241	1263	0.96

Sequence Information

Coding Sequence: ATGGACGAGAACGTGGTGGAGATTGAAAACGAGGAAGCGATCGAGAACGTGGCGAATGTCTGCAGACTGTGCCTTTCCACAGATGGACCTAGAGCTTCGGTGTTTGGAACGCAGGAGAAAGAGGAGTCGTCCAGCGTGTCGCTGGTTGCTAAGATTCAGGCCTGCCTGTCGATTCAGatttcaaCAACCGATAAGCTGTCCACGTGGGTATGCACAAATTGTGTGAAAAACGTTAATCAATGGTATACCTACAAGGAATCGTGTTTGCGTTCCCAGGACAAACTACAAGAATGGCTGGCACATCAATTGCAGTCGAATCCTACGGTTATTAAGATCAAAAATGAACCAATGGACATAGATTACGAAAATAGTGTAGAAATTATCGAGGAGACTGTCAATAATATAGAAGTTATCAAGGAGACACATCTACCAGTTCAAACAGTGAAAAACAATGaatctaataatgaaaaagtacAAGATGTAATAGATAACAGCGATGTTAATGATGCTGAGAATGATACTAACAAAGACCCCGAATCAATCTCATCCGCAATGGAAAAGAAAACTGATAAGGAAAACAATCAAGCGGATCAGCAAGATTCTATAATTCTGTGTTCCATTAAAAGCGAACCGCAAGATGAAGACGATACCGATGGTACCATAGAAATAGAATCGAATAGCAGTGAATTGAATGCTATGGCAGTCGATGAGGCAGAGGACACTGTCATGGAGGCTGATTCCACGCAAAAGTCTAATGCGGCTGGCGCATCGCCTAAGAAGAAATTCAGACGCGGTCCTCATACTCACTTCAGAGGAACGCGTGTTTTTAAGCAGAAGTGCACGCACTGCCAGATATTTTTGCATTCTAAATACTCGTACATGAAACACATGAAGAGATTTCACAGTAAAGAAAATGGCATTGGAAATTCAGAGATGCGGAACGACGACGAAGAGATGATAGAGGATCTAGAAGATGAATTGATCAGTATGGAGAAGGATTCGCCGCTAACGCAAGTTCAACAGGACATTATTAGTCAACTGAAAACTTTTTCTTGCTACTCTTGCGAGCAGACGTTTAACGATCGACGTAGCACTCTTTCTCATATACGTCAACATATGCCGGATCTAAGACCGTACACATGTATTGCTTGTTTGACAGAATTTCCAGATCGATCAATGTATCAGTTGCATTGCGGAGCTTCCTTCGAATGCGCCATGAAAATTGCCTTAGTTGTACCGAAACACGGTAGCGAGcgatattttacatgtaacaTGTGCTTGCGTTCAATGCAAGGTAGAAAGGAGTTACTCAGTCATTTGTCGAAGCATTCTGATAAGCAGTACGAGGAGATGATGTCATCGTCAACGCGAGCCCCGCCTAAACTGAAGCCGATGGCGCCGTTGCCATCCTCGAAAAACAGCACTCTACATAAGAGCGGACCTTATAAGAATGGCGATCCAAAGCACAATCATGCCTGCGATCTATGTGGCATGATCTACCGATATCGGCCCAATATGATCAAGCACAGAGAAATATGTGCGCGATTGGACCCAGACAACAGAATATTGTACAAGTGCGTACATTGTTACATGACGTTCCTTGTGTTTAAGAAATTCCATTATCATATTACAGCCGatcataagaaaaaagattttacttGTTCTGAGTGCTTTTCCAAATTCCGATCACCCAGCGATTTTGTAACTCATTACGAAACCCATCGCACGACAATACAAGATAACCAACAAGAGCAGTATGACAGTACCTCGCAAAATACAGTTCAAACGCCACTGAAGGAACGTAATGCTTGTGAAACAAATGTCAAATCAAGAGTTAGTTCACGAATATCAAATCAACAATATCCTTGCCCTCTCTGTCCCGAGAAGTTCTCTACGAAGGTTGAATTGAACGAGCATCGAACTCTTCATCTTAAAATGAAGATCTATTCGTGCGCCATTTGTCGTAGCTTATTCAGCAGCGCCGGCTCCTTGGAGATCCACATGAAGGATCATGGTATCGAAGACGCACATGAAAGGGACGCCAATGTCTCGTGCGTGGAATTCGGCAGCTTAGATGAGGATGTGAGGATTGAGAAAGATTTGGTGAATATTAGTAGCATCTCGGATCCTGGTCAAAATCATGAATGTGGCGAATGTGGTAAGGTACTATCCAGTTACGCTAATCTTCGACGACACGCTAAAATCGCTCATCGAAATACTAAGATCTATGATTGTGTCGATTGCTCGCGAATGTTTATGCGTAAAGATTTGTATGATACTCATATGGAGATCAAACACAATTCTAAGAACACAATGTTGCAGTGTCCGCAATGCCCCAAGAGTTTTGTCTTCCATTCGAATTTCACTTATCACTTCCGTACTGCTCATCTTCAGAAATCACAAACCGGTTATGCCTGCGATATCTGCGGCAAAGTCTTTGTTGAGGAAGcgtctttaaaaatacataggGGCTGGCACAATCGCGCCAATTCACGTTTGAGCACTCGATTTATACTGGGAGATCAAAATACATCTAATAACGCACAAAAGGAATCAAATAGCGTTGAATCTGTTGAGAATTCAGAACGGCCGGCGAGAGCACGAAAATCCTTCCCTAATCCACCACTTCAATCACTAACAAAGACATCAGGGAATTACCAATGTCAAGTAtgcaatgataaatttaatgatgtCATAGAACTAAGGACCCATTTGTGGGACGTCCATTGCGCTCGCAACAAACCAGAGAAGAGTTTCTCTAATGATGAGCTTCAATGCGAACTCTGCACGAACATTTTCCCCGATAAGGGAACTCTAGCATGTCATATGCAATGGCACAAGGCTAATCCTATTCTCAGTGACATACAAAAAACGTTTTCCTGCGATATATGCGGCAGGTCTTACAGTTCGAAGAAGGCTCTATGGAAGCACAAGAGACTTCACAAAGCTACCGCTGTAGCATCAATTAAATTCCAATCTTTGGCTAGAAAACCGATGGCTACACAATTCCTGTGCAACTTCTGTCGCAAAGTCTTTTCAAGCAATCAATCTTTGCAACGACACAAACTCACTTTCCACAGTGATCCGTTGAATCAACAACGTGCGCAGCAACATTTGTACAACAGCAGTCAATTATCATCATTTGATGAACCAAGAACAAAGCGCATGAAACTagacattgaaaatgataattcGCAGACCAAATTGTCGCCTTTCGCCATGGATTTCGCTGGCGAGAGAAGGAAACCGGTTATGTGCCATGTTTGCAAGAAAATGTTCCCTAACATGAGCGTGCTGTACAAGCATAAGCAAATGGTTCACAAACGACCAAGAATACCCGAGTGTATACCGATGTCGACTCAGGATGGCAAATTTTCATGCAACATCTGCTTTAAGAAATTCCCCGGTCTATCAAATCTGCGAcaacattttacaattaaacacAAGAAGACATCCGAAGCCAGCAACGCATCAATGGCAGTGAGCAATGAGAGATTGTCGCTCCCGACATCCGAACGTCCAAAGGAGGGAACTTATGAAGTGGCCTACAATAACGTGATGTACAGCTGTAAATTGTGCAAGCAGTGTCACGTCTTCAATAAGGATTCTATCATAAGACATATCACCAATGTGCACAACGCAGTGTATCAGGCCGATAGTAAGACGTTCCACAGGGAAATCACTCTGAGCACTTACGTAGTAAAGGATGCGATCGGACCTACTTGTCCGCGATGCGATGTTAAATATCCTAATAATAGGGCTCTGAAGATACATTACATTAAGTTCCACGAAAATAATGactaa
Protein Sequence: MDENVVEIENEEAIENVANVCRLCLSTDGPRASVFGTQEKEESSSVSLVAKIQACLSIQISTTDKLSTWVCTNCVKNVNQWYTYKESCLRSQDKLQEWLAHQLQSNPTVIKIKNEPMDIDYENSVEIIEETVNNIEVIKETHLPVQTVKNNESNNEKVQDVIDNSDVNDAENDTNKDPESISSAMEKKTDKENNQADQQDSIILCSIKSEPQDEDDTDGTIEIESNSSELNAMAVDEAEDTVMEADSTQKSNAAGASPKKKFRRGPHTHFRGTRVFKQKCTHCQIFLHSKYSYMKHMKRFHSKENGIGNSEMRNDDEEMIEDLEDELISMEKDSPLTQVQQDIISQLKTFSCYSCEQTFNDRRSTLSHIRQHMPDLRPYTCIACLTEFPDRSMYQLHCGASFECAMKIALVVPKHGSERYFTCNMCLRSMQGRKELLSHLSKHSDKQYEEMMSSSTRAPPKLKPMAPLPSSKNSTLHKSGPYKNGDPKHNHACDLCGMIYRYRPNMIKHREICARLDPDNRILYKCVHCYMTFLVFKKFHYHITADHKKKDFTCSECFSKFRSPSDFVTHYETHRTTIQDNQQEQYDSTSQNTVQTPLKERNACETNVKSRVSSRISNQQYPCPLCPEKFSTKVELNEHRTLHLKMKIYSCAICRSLFSSAGSLEIHMKDHGIEDAHERDANVSCVEFGSLDEDVRIEKDLVNISSISDPGQNHECGECGKVLSSYANLRRHAKIAHRNTKIYDCVDCSRMFMRKDLYDTHMEIKHNSKNTMLQCPQCPKSFVFHSNFTYHFRTAHLQKSQTGYACDICGKVFVEEASLKIHRGWHNRANSRLSTRFILGDQNTSNNAQKESNSVESVENSERPARARKSFPNPPLQSLTKTSGNYQCQVCNDKFNDVIELRTHLWDVHCARNKPEKSFSNDELQCELCTNIFPDKGTLACHMQWHKANPILSDIQKTFSCDICGRSYSSKKALWKHKRLHKATAVASIKFQSLARKPMATQFLCNFCRKVFSSNQSLQRHKLTFHSDPLNQQRAQQHLYNSSQLSSFDEPRTKRMKLDIENDNSQTKLSPFAMDFAGERRKPVMCHVCKKMFPNMSVLYKHKQMVHKRPRIPECIPMSTQDGKFSCNICFKKFPGLSNLRQHFTIKHKKTSEASNASMAVSNERLSLPTSERPKEGTYEVAYNNVMYSCKLCKQCHVFNKDSIIRHITNVHNAVYQADSKTFHREITLSTYVVKDAIGPTCPRCDVKYPNNRALKIHYIKFHENND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00182140;
90% Identity: iTF_00016844;
80% Identity: -