Basic Information

Insect: Atrophaneura dixoni
Gene Symbol: Znf296
Assembly: GCA_018248015.1
Location: DWHX01000882.1:23219-31356[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00034 0.054 15.6 0.4 3 20 111 128 109 128 0.97

2 11 0.00014 0.022 16.8 0.5 2 23 172 193 171 193 0.95

3 11 0.059 9.3 8.5 0.2 2 21 298 317 297 318 0.90

4 11 0.0023 0.37 12.9 3.0 1 23 326 349 326 349 0.94

5 11 6e-05 0.0094 17.9 5.2 1 23 369 391 369 391 0.98

6 11 1.6e-07 2.5e-05 26.0 3.3 1 23 398 420 398 420 0.99

7 11 1.4e-06 0.00021 23.1 4.1 3 23 434 454 432 454 0.96

8 11 6.7e-05 0.011 17.8 3.6 1 23 460 482 460 482 0.99

9 11 1.1e-07 1.8e-05 26.5 0.4 1 23 488 510 488 510 0.98

10 11 1.5e-07 2.3e-05 26.2 1.3 1 23 516 538 516 538 0.99

11 11 0.0024 0.39 12.9 1.8 1 23 544 566 544 566 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00034	0.054	15.6	0.4	3	20	111	128	109	128	0.97
2	11	0.00014	0.022	16.8	0.5	2	23	172	193	171	193	0.95
3	11	0.059	9.3	8.5	0.2	2	21	298	317	297	318	0.90
4	11	0.0023	0.37	12.9	3.0	1	23	326	349	326	349	0.94
5	11	6e-05	0.0094	17.9	5.2	1	23	369	391	369	391	0.98
6	11	1.6e-07	2.5e-05	26.0	3.3	1	23	398	420	398	420	0.99
7	11	1.4e-06	0.00021	23.1	4.1	3	23	434	454	432	454	0.96
8	11	6.7e-05	0.011	17.8	3.6	1	23	460	482	460	482	0.99
9	11	1.1e-07	1.8e-05	26.5	0.4	1	23	488	510	488	510	0.98
10	11	1.5e-07	2.3e-05	26.2	1.3	1	23	516	538	516	538	0.99
11	11	0.0024	0.39	12.9	1.8	1	23	544	566	544	566	0.98

Sequence Information

Coding Sequence: ATGGCTTCTTCGAAAAAAAAGGCTGATATCAAAATAGGAGAGTTGTGTCGAACTTGTTTAGCCAAAGAAATAGAATTATTTCCCatctttgatataattttggaTACCACAACGTTGCACGATGTAATATCTTCAATAACGGAAGTACAGATTGACAAAAATGATGGCctgccaaaaaaaatatgtcaagaATatgttaaaaatgaaacgaGCACGGAAGAGACTCGAACGGTTAAGAATTGCATTGTGGATATTGATACTGATAACTCACAAGAccagaaaaaagagaaatgtaTCAAAGttgaatatgaatataatagtAGCACTTTCTGTCCTCTCTGTGGTACGTGCTATGTAGATTCTGATGGTCTTACCAAACATATGTGGGACAGTCATGCTGAAATAATGGGACCAAAGAAGAGGGGTAGGCctaaaaaaatggtaacagATacAATTCTGAATAAACTCTCTGAAaatggttattatttaaaaacaatcccTGTGAAAAGATTGACATGTTCATTTTGTGAAGAGAAATTTAAAACCAAAGAAGAATTAGTTGTGCATATGACTGAACACAAAGAAACAAAAGTCTTGTGCTGTGTTATTTGTAAGAAAATGTATCTTATGAAGAAATATTTCGATATACATTTGTGTGTTGAGGACAAAATTCAAGGAAGCCATTTGCAAGAGAATGACCCGCCCATTGTGCTGCCCAAGAGTGAAAATGAAGATTTCATGATTGAGACATCTTTACATCAGTTATTAGACCTTAGTAACAATCCGGAAGCGTGCACGTCGTGGCAGGCGTGCAGTGCGTGTAGCGCTTTACTGGCCACACCCGCTGCGCTCGCGGACCACGTGGACGCGTTACACCCGGAACTCTCGCTGCGCTGCGCTTTATGTAATAagGTATTTGCAACCGTGAAGTCCGCGAGCCGACACCGCAGTAAGTGCGCAAGCGTAGAGCGCGCGCACGAGTGTGCTAGCTGCGGTCAGCGGTTCGCTCACGAGGTCTCGCTGAACAAGCACATCCTGCACAGTCACGCGGGACAGAGCGTGTCAGTCAAGTTCGTAGCGCGCGCAGTCACCGATGGCCAGAAGTACCAGTGCGACACTTGCAATCGGTGCTTCTTCAGGAAGGACTTGTTAGCAAAACACACGAAGAACCACAAGTCAAGCGACAAATTTTATGAGTGCGATATATGTAAGAAACGCTTTCACAGGAGCGACAATTTGCGATCGCATATGCGAGTTCACGGGACTGCGGAGGGAAGCGCCGCGTCAGAGGCGTGCCTTTGTCTTTACTGCGGCCACAGCTTCACCAATTCCTCGAACCTCATCGTCCACATGCGCAGGCACACCGGCGAGAAACCTTACAAGTGCGACTTCTGCGACAAAGGATTCCCAAGGTCATCCGATTTGCAGTGCCATAGAAGGTCCCACACTGGAGAGAAACCGTACATATGCGGCGTCTGTGGTAAAGgTTTTTCCCGTAGCAATAAGCTGTCTAGGCACATGCGCGTGCACACCGGCCTGCGTCCGTACAAGTGCTCATACTGTGAGAAGGCGTTCTCACAGAGCAACGATCTGAACCTCCACATCAGGAGACATACGGGCGACAAGCCCTATATATGCGAGATATGCGGCGATCGCTTTATACATGGCACTGCGTTACACAATCACAGACGTACTCACGGACACTACCCAACGACAGAGGCGTCGTCCACATCGCTGCCCACACCATTACCCCCCGCCCTGTTTGCCCCTGCGCTCGCGCCTCCTCTCCCGCCCGCTGAGATAACCGCACGCCCGCGTCGCTAG
Protein Sequence: MASSKKKADIKIGELCRTCLAKEIELFPIFDIILDTTTLHDVISSITEVQIDKNDGLPKKICQEYVKNETSTEETRTVKNCIVDIDTDNSQDQKKEKCIKVEYEYNSSTFCPLCGTCYVDSDGLTKHMWDSHAEIMGPKKRGRPKKMVTDTILNKLSENGYYLKTIPVKRLTCSFCEEKFKTKEELVVHMTEHKETKVLCCVICKKMYLMKKYFDIHLCVEDKIQGSHLQENDPPIVLPKSENEDFMIETSLHQLLDLSNNPEACTSWQACSACSALLATPAALADHVDALHPELSLRCALCNKVFATVKSASRHRSKCASVERAHECASCGQRFAHEVSLNKHILHSHAGQSVSVKFVARAVTDGQKYQCDTCNRCFFRKDLLAKHTKNHKSSDKFYECDICKKRFHRSDNLRSHMRVHGTAEGSAASEACLCLYCGHSFTNSSNLIVHMRRHTGEKPYKCDFCDKGFPRSSDLQCHRRSHTGEKPYICGVCGKGFSRSNKLSRHMRVHTGLRPYKCSYCEKAFSQSNDLNLHIRRHTGDKPYICEICGDRFIHGTALHNHRRTHGHYPTTEASSTSLPTPLPPALFAPALAPPLPPAEITARPRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01496742;
90% Identity: iTF_01496742;
80% Identity: -