Adix017631.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Atrophaneura dixoni
Gene Symbol
SPAC1486.03c
Assembly
GCA_018248015.1
Location
DWHX01005938.1:10387-12690[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.84 1.6e+04 -3.2 0.0 137 175 246 283 244 287 0.58
2 2 1.3e-88 2.4e-84 284.8 3.4 2 275 307 590 306 590 0.98

Sequence Information

Coding Sequence
ATGGACTCCCCATCGAGCTCGTCGTTCGGCGGCCAGAAGCGCAAAGTGGCCGATATGAGCTCCGACGAAGACGATGCGCGTCCTCCCACGGGCTTTCGCGGATTTGCCAGAGCTTTACCTCGATCCGAATCACCTCCCTCGCTCGGTCTGGGGGCTGCACGTCGAAACAACACCATGCAATCGACCCCTAGAGGTGGAAACGCCGGCGCCGGTCCGGGCCCCAAAGGCGCCAGCTCGTTTGCCGCGCGTATGATGGCCAAGATGGGTTATAAGGAAGGTCAAGGTCTAGGATCAAGTGGCCAGGGTATCGTCAATCCGATTGAGGCGCAATCTCGGCCCACGGGTGCTGGATTGGGTGCGGTTCGAGAGAAGACCAAGCAAGCTcgagaagaagaaaaacggGCCGCGGCCAGTCGGGGCGAAGAGGTGGAAGAGGATAGCTCAGATGAGGAACGAAAACGACGGCAGAAGAAAAAGGAGGAGCGCAGACGGAGAGAAGGTCGCAGTGAAACTGGCACCCCGGTCCCGCGCGCGAAACCCAAATTTCGGACTGCTCGAGAGATGGATGAGGATATGGATGGTCTGGAGGTTCCAAATGTGCTCAAGTCTCTGGTCGATGCGACTGGAAAGGAACAGCGAGTCTTGACATCTACGGCTGGGTTGATGGCCCAGCAGGAATTTGTGAATCAAGGCGAAGGAGAGGCGGCAAAGATTGCGCGACGGGCCCGACACGATCTCGAAGCTTTTGCAGATGAGTGGAAGGGTTTGACTGAACGAAAGAAGTACATCGAAATGGAAGAGGCCCAGATTGTGGACCAGTTAGACTCCAGCCAGCAAAAGATTGACCAGCTCACGGAGTTAACTATGGCCGTGGGAAACCTGGAAATCTTCCAGGAAGACAACATTGCAGGAAAGTTCGAAGAAGTTACCAGCAAACTCGAATCATTGGAAGTCAAATACCGCGACCAAATAGACGAATATCGATTATCGGAGACCGCAGTCGCCGCAATTCATCCTATCTTCCGCCAGGCAATGGAAGAGTGGGATCCTCTTCAAGAACCAACGTTCCTTCTATCACACCTGCGTCGTCTCCAGCCACTGTTGTCACAGAAGACCGGGGACCCATATCACTCCCGGCACTCAACTTCGCCCTACGAGACCATGATCTACACCTTATGGTTACCGCGCGTGCGTTCTGCGCTACTCAACGATTGGGATGTATTTGACTCCGGCCCAGCCACGACGCTGGTCGTTTCGTGGAAAGAGGCTTTGCCGTCATTTGTCTACGCCAACGTCCTAGACCAACTGATCGTGCCCAAACTCAGCAGCGGTTTGAAGGCATGGAAGCCCCGAAGCAGCAGCAACCGACGACATCCATCCTCACATCACGGCTCCCAATTCCCATGGTGGCTATTCACCTGGCTCCAATACCTCGACGAACGACACACCAACCCCAAACAACCCACAGGACTGATGTCAGACACCAAGCGCAAATTCCGCGTCGTCCTGGACACCTGGGACCTCCGCAAGGGGGTAATCAGCGGCATCGACCTCTGGAAATCCGCATTAGGGTCCGAATTCGACATCTGTCTCCGCAACCACCTCCTCCCGCGTCTGGGACGTCACCTCCGCGAGGACTTCGACGTAAACCCACAAGACCAGGACCTCACGGCGCTCGAAGACATCTTTAAATGGAAAGACTGCTTCGCGCCCAACGTGATGGGCCTGCTCCTCGTCGCAGAGTTCTTCCCGAAATGGCACTACATCCTCTACATCTGGCTCACCAACGATCCCAACTACGAAGAAGTCGGCGAGTGGTTCTCCTGGTGGCGCTCCCAGGTCCCCGCCGACGTCAACGAATTGACCATTGTTGACGACGAGTGGAAAAAGGGTCTGCAGAGTATGGACCTCGCCGCTCGTCTGGGCGATCGCGCCGCTGCCGAATTACCCCCTcccaccactaccaccaccactacaaCGGCGGAACCAACCACCGTCCCAACTCAACCACCCGTCGAAGAACCGCGCAACCCCACCAAACCCCGCGTTGTCGAAGAAGTCGCCTTCAAGGATATCCTCGAAACATGGTGCGCGGAGCAAGGCCTACTCATCATCCCGCTCCGCGAAGCGCATCCGCAAAACGGCCAGCCTTTGTTCCGCATCACGGCCAGTGCTACTGGGAGAGGTGGCGTGGTGGCTTTTATCCAAGGGGATGTGGTCTGGGTTCAGAATAAGAAGGCCAAGGAGATTTGGGAGCCGACGGGGTTGGAGGAGACGTTGGTTGAGAAGGCGGAGGGGAGATGA
Protein Sequence
MDSPSSSSFGGQKRKVADMSSDEDDARPPTGFRGFARALPRSESPPSLGLGAARRNNTMQSTPRGGNAGAGPGPKGASSFAARMMAKMGYKEGQGLGSSGQGIVNPIEAQSRPTGAGLGAVREKTKQAREEEKRAAASRGEEVEEDSSDEERKRRQKKKEERRRREGRSETGTPVPRAKPKFRTAREMDEDMDGLEVPNVLKSLVDATGKEQRVLTSTAGLMAQQEFVNQGEGEAAKIARRARHDLEAFADEWKGLTERKKYIEMEEAQIVDQLDSSQQKIDQLTELTMAVGNLEIFQEDNIAGKFEEVTSKLESLEVKYRDQIDEYRLSETAVAAIHPIFRQAMEEWDPLQEPTFLLSHLRRLQPLLSQKTGDPYHSRHSTSPYETMIYTLWLPRVRSALLNDWDVFDSGPATTLVVSWKEALPSFVYANVLDQLIVPKLSSGLKAWKPRSSSNRRHPSSHHGSQFPWWLFTWLQYLDERHTNPKQPTGLMSDTKRKFRVVLDTWDLRKGVISGIDLWKSALGSEFDICLRNHLLPRLGRHLREDFDVNPQDQDLTALEDIFKWKDCFAPNVMGLLLVAEFFPKWHYILYIWLTNDPNYEEVGEWFSWWRSQVPADVNELTIVDDEWKKGLQSMDLAARLGDRAAAELPPPTTTTTTTTAEPTTVPTQPPVEEPRNPTKPRVVEEVAFKDILETWCAEQGLLIIPLREAHPQNGQPLFRITASATGRGGVVAFIQGDVVWVQNKKAKEIWEPTGLEETLVEKAEGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00430686;
90% Identity
iTF_00430686;
80% Identity
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