Adix032452.1
Basic Information
- Insect
- Atrophaneura dixoni
- Gene Symbol
- clz9
- Assembly
- GCA_018248015.1
- Location
- DWHX01016480.1:513-2099[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-07 0.00038 21.7 0.0 8 40 13 46 7 50 0.90 2 2 5.2 1.5e+04 -2.6 0.1 35 44 110 119 108 119 0.86
Sequence Information
- Coding Sequence
- ATGGAATGTGATTTAAAAGAGAGCCGAGTTCAAATGGCATTAGATGCCCTCAAAAAGGGTCAATTTAAATCACAAAGAGCAGCTGCTTTGGCCTTTGATATCCCTGAAACTACTCTTCGCCGGCGGATCAGGGGTGTGGTATCAAGACCTCAAAAAACAGCCAATTGCCAGAAACTATCAGATACAGAAGAATCCACACTTTTAGCATGGATTCTGGATATGGACAAACGTGGTCTACCTCTTCATTTACCAATTGTTCGCCATCTAGCCCAGCTCCTAGTCTCTGCATGCCTACCATCAACCACTATTGGAGAAAACTGGGTTAACCGCTATGTTAAACGCCACCCTGaattaaagtcaaaatataCCCGGAAATATGATTATCAGCGTGCCAAATGTGAGGACTCTAGCCTTATTCAATCCTGGTTTATGCGTGTCCAGGAGACCATTCAAAAATATGGGATTTTAACAGAAGATATCTACAACATGGATGAGACTGGCTTTCAGATGGGTGTGGCATCAACTTCTAAAGTTATCTGTGGATCAGAGACTAAGCAGAGTCATGCAAAAGCTCTTCAGCCTGGGAATAGAGAATGGGTAACTGCAATTATTGCAGTAAATGCAACAGGATGGTCTCTTCCTCCTCAAATTATCTTTGCTGCTGCCAACCATCAATCCTTATGGTATTATGATATACCAGAGAATTATGTTCTTAGTGTCAGCAACAATGGCTGGACAACAGATGATTTGGGGATTAAATGGCTTCAAAAGGTTTTTGAGCCAAATACAGCTTTGCGGACTGCTGGAACATATAGACTATTAATTCTGGATGGGCATGGGAGTCATGCTACTGCAGAATTTGATAGATTCTGCATGGAGAAGAAGATTATTCCATTATATATGCCTCCTCATTCTTCTCATCTTCTTCAGCCATTGGATGTATCCTGCTTTTCACCTTTGAAGCATCTCTATGGTCAGAGAGTTCAGGAGTTGATCCAGAAGAGAATCTACTCAATTAAAAAAGAggattttctttatatctatcCAGCAGTTCATCAGCAGGCTTTATCttcatcaaatattaaaagtggCTTTACAGCTACTGGTCTGGTTCCTCTTTCTCCTGCAAGGGTTCTCTCAAAGATTCCAAAGACACCAACACCACCTTCTACCTCTCACAGCAATCAATCCTTTGGTATAGGAATAACACCAGCCAATATATATCAATTGGAACAGCAAAAGAAGAAGATTCAGTCTTTTAAGGATGCAGAAGTCTCTCCATCTAGAATAGAGGAGGCTATGAAGAAGGTGATGAAAAGTGCTGAAATAACCATGCAAAATACTCTTCTATTACAACAAGAAGTCAATCAGCTTCAGGAAGAAAATCAATATAGAAAGAGAAGAAGGCAGAGAACCAAACACTTTATTCAGAATGGAGGAAGTCTAACTGTTGCTGAGGTCAGACAGCAGGAGGAAGAGCAAAGAAGAGAGTTAGAAAGAGATGCTCAACCTAGGCCACGCAGGCCTCCAACATGCAGTGATTGTGGTACTCTAGGTCATAAAAGGCCTCAATGTCCTCATAGATAG
- Protein Sequence
- MECDLKESRVQMALDALKKGQFKSQRAAALAFDIPETTLRRRIRGVVSRPQKTANCQKLSDTEESTLLAWILDMDKRGLPLHLPIVRHLAQLLVSACLPSTTIGENWVNRYVKRHPELKSKYTRKYDYQRAKCEDSSLIQSWFMRVQETIQKYGILTEDIYNMDETGFQMGVASTSKVICGSETKQSHAKALQPGNREWVTAIIAVNATGWSLPPQIIFAAANHQSLWYYDIPENYVLSVSNNGWTTDDLGIKWLQKVFEPNTALRTAGTYRLLILDGHGSHATAEFDRFCMEKKIIPLYMPPHSSHLLQPLDVSCFSPLKHLYGQRVQELIQKRIYSIKKEDFLYIYPAVHQQALSSSNIKSGFTATGLVPLSPARVLSKIPKTPTPPSTSHSNQSFGIGITPANIYQLEQQKKKIQSFKDAEVSPSRIEEAMKKVMKSAEITMQNTLLLQQEVNQLQEENQYRKRRRQRTKHFIQNGGSLTVAEVRQQEEEQRRELERDAQPRPRRPPTCSDCGTLGHKRPQCPHR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01496491;
- 90% Identity
- iTF_01496491;
- 80% Identity
- -