Adix016743.1
Basic Information
- Insect
- Atrophaneura dixoni
- Gene Symbol
- -
- Assembly
- GCA_018248015.1
- Location
- DWHX01005531.1:9529-13775[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-09 3e-06 28.5 0.0 5 35 176 207 174 215 0.87
Sequence Information
- Coding Sequence
- atggattatgttaaaaatgatACGGTGTTGTTTGTGGGAAGATGTAAATGCTGTCTCAATGAGGGCGACTTGAAAAATTTGTGGACGCAACATATATATGAAGGGAACATAGAAATTTATGGACTGATGTTATTAGAGTGTTTTGATTTAACATGGCAACCACCTGAGGAGAATTTGcaatatttagaaatgataTGCGACTCATGCATTGATCGGTTGAGAGATGCGCTGGCGTTCAAAAGAGAAGTACTGGTGAGCGAGGAAGTGTTGCGTGAGCATGAGGACAAATtGTTAGTCTGCACGACGGTTAAAAGTGAAGAGTTTCAGGATGAAGAGTCGGAGTTCGCTGATGTTGAATACTTGGAGATTGACACCGTAATAAAGGAAGAGATGAATGATGATCTGATAATGAACgACTTGTCGCAGAGCTCCGACGAGGTGCAGCAGAAACCGAAGAAGAAGTGGCCGAAGAAGCTGCCCAAGGAGGAcagaaacaaaacatacaaGCAGTACACCGTGAAGCAGCTGAAGATGGCGATGGACGCGGTGCTGACCGACAACATGTCGTGCAGCCACGCGGCGGAGAAGTACGGCGTGCCGCGGAAGACCCTGTCCGCGAAGCTCCAGAGTGGAGCCATCAATAAAGAAGGTGAGATGGACGACGACGCGGCCAAGTTGATTGAGCAGGAGAAACATTACAAGCTGGTTGAAGAGATCAAGACCATCCTCACCTACACCAACGCTATACCTTACAAGACCAAAGCGTCCAGGTATTACTGCGCCTACTGCTCCATCGACAGAGCGGTTTTCGAAGACCCAGACGACTTGAGGACCCACACCCGAACCACCCACGTCAACGAGAGGACATCCAGCATCGACCAAATGATGAAGCCTCAATGGATGAACGAAGTACTCAAAATGGATATAAACAGCCTACACTGCACCGTCTGCTGCACAATACTACTCACCTGGAACGACATGTTCAGGCACCTCGAGAACGAACACCAAGTGTATCTAGATGAAGCATACAACCGTGTGATACCTTACATACTGTCCAGGGATCTGAAGTGCGCACTGTGCAACGAGCACTTCCCCAACTACCACAACCTGGACGGCCACATGAACACACACTACAGCAGCTACATCTGCTACGAGTGCGGGGACACGTTCCTGGCCGCCAGCCGCCTCAACAAGCATGTGGAGGTGCACAACGGCGGCCACCACCCCTGCGACGCGTGCGGCAAGGTGTTCAGGCTGAAGAAGTACATGAAGAAGCACTACGACCTAGTCCACTGCCAGGAGCAGAAGATCAAGTGCCTGTACTGCACGGAGAGGTTCTACGGCACGTACCAGAGGCACCAGCACGTGGTGGAGAAGCACGGCGAGAGGGTGAAGGTGAGCGCCTGCGAGATCTGCGGGAAGACCTTCGACTGGCAGCCTTACTACACCGCACACATGAGGAGGATACACGGCACGGAGAAGAACTACAAGTGCAAGGAGTGCGGCAAGATGTTCCTCATGAAGTACGAGCTGAGGAACCACCGGGTGAAGCACGAGACGGAGAGGAATTTCATCTGCGACATATGCAGCGAGCGGTTCAAAACTAAGCCGGGTCTGCTGCGCCACTGCAGGGTTCACCACGACGGCGTCTCCAAGAGCATTGTCAGAGTGAATAAGTTCcatttttga
- Protein Sequence
- MDYVKNDTVLFVGRCKCCLNEGDLKNLWTQHIYEGNIEIYGLMLLECFDLTWQPPEENLQYLEMICDSCIDRLRDALAFKREVLVSEEVLREHEDKLLVCTTVKSEEFQDEESEFADVEYLEIDTVIKEEMNDDLIMNDLSQSSDEVQQKPKKKWPKKLPKEDRNKTYKQYTVKQLKMAMDAVLTDNMSCSHAAEKYGVPRKTLSAKLQSGAINKEGEMDDDAAKLIEQEKHYKLVEEIKTILTYTNAIPYKTKASRYYCAYCSIDRAVFEDPDDLRTHTRTTHVNERTSSIDQMMKPQWMNEVLKMDINSLHCTVCCTILLTWNDMFRHLENEHQVYLDEAYNRVIPYILSRDLKCALCNEHFPNYHNLDGHMNTHYSSYICYECGDTFLAASRLNKHVEVHNGGHHPCDACGKVFRLKKYMKKHYDLVHCQEQKIKCLYCTERFYGTYQRHQHVVEKHGERVKVSACEICGKTFDWQPYYTAHMRRIHGTEKNYKCKECGKMFLMKYELRNHRVKHETERNFICDICSERFKTKPGLLRHCRVHHDGVSKSIVRVNKFHF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00180835; iTF_01116042; iTF_01495714; iTF_01496130; iTF_01494248; iTF_01496489; iTF_01494669; iTF_01494989; iTF_01496909; iTF_01495384; iTF_01115641; iTF_00249646; iTF_00250021; iTF_01130398; iTF_01129970;
- 90% Identity
- iTF_00180835; iTF_00249646; iTF_00250021;
- 80% Identity
- iTF_00180835;