Alep022983.1
Basic Information
- Insect
- Athetis lepigone
- Gene Symbol
- TFDP1
- Assembly
- GCA_033675125.1
- Location
- CM066233.1:11510380-11521843[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 1.6e+04 -3.2 0.0 19 32 33 45 18 60 0.47 2 2 1.9e-23 1.6e-19 70.5 0.1 2 65 80 159 79 159 0.97
Sequence Information
- Coding Sequence
- ATGTCCTCTGAAGGAGTCCATAAGgtTAAACAGGAACCACTGACTGAACTGAAATTTATACAAACTGTGCCAGATCTAATATCAATACCATCGAATTCCGAAAATCAAGTAACAAGCACGAGTACTGCAAATAGCATATCTCCAACTATGTCGCATGCCTCTAGACGGAGACATGATTCTGATAATGATCCCCCAGCAGAATACACCACTAAAAGACGTAAACATGCAGACAAAGTTGGTAAAGGATTGAGGCATTTTTCAATGAAAGTTTGTGAGAAGGTCAGAAATAAAGGATTCACTTCTTATAATGAAGTAGCAGATGAATTAGTGCTAGAATTTGCAGCAGGAATGCATGGTTCAGCAGATAGCCAACAATATGACCAAAAGAATATCCGCAGAAGAGTATATGATGCATTAAATGTGTTAATGGCTATGAACATTATAtctaaagaaaagaaagaaatacgATGGCTTGGACTCCCAACAAACAGTGTGCAAGAATGTACTgcattagaaaaagaaaaacagtcTAAGTTAGAGCAGATACAAAAGAAGACTCAGCAGTTACAAGAGCTCATATTACAGCACATTTCGTTTAAAAGTTTGATAGAAAGAAATAAGGAAGCAGAGAGTAAAGGAGTTAAGCCGTCTCCATCGTCAGCAATCCATTTGCCATTCATTGTTGTGAATACTAGTGATAAAGCTTTAATTGACTGCAGTATTTCTAATGATAAGACagaatatatgtttaatttcaaCAAAAAGTTTCAAATACATGATGACattgatattttaaaaagaatggGTCTTTTATTTGGCTTAGATAAAGGGGAATGTTCAGAAGAGGATATTGAAAGGGCAAAAAACATGGTtccaaaatctttaaaaacttatGTTGAACAAATGGGCAGAGGAGTCATAACGAAACTTTCAACAATGCTCGAAGAAGAAGAACTCGACGATGAGGCAGGCGACGAGGAGGACGTGTTAGAGGCAGAGCCAGAGGCAGAAGAGGAGCAAGAGGAACCGGACGGCAACGAGTACAGCGACGACAGCAGCGACGTCGACGTGTAG
- Protein Sequence
- MSSEGVHKVKQEPLTELKFIQTVPDLISIPSNSENQVTSTSTANSISPTMSHASRRRHDSDNDPPAEYTTKRRKHADKVGKGLRHFSMKVCEKVRNKGFTSYNEVADELVLEFAAGMHGSADSQQYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWLGLPTNSVQECTALEKEKQSKLEQIQKKTQQLQELILQHISFKSLIERNKEAESKGVKPSPSSAIHLPFIVVNTSDKALIDCSISNDKTEYMFNFNKKFQIHDDIDILKRMGLLFGLDKGECSEEDIERAKNMVPKSLKTYVEQMGRGVITKLSTMLEEEELDDEAGDEEDVLEAEPEAEEEQEEPDGNEYSDDSSDVDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00967843; iTF_01030925; iTF_01532821;
- 90% Identity
- iTF_01538532; iTF_01439687; iTF_01025770; iTF_00850386; iTF_01027092; iTF_00237259; iTF_01030925; iTF_01029010; iTF_01532821; iTF_00374966; iTF_00809851; iTF_00124029;
- 80% Identity
- -